RNA–Protein interactions for RNA: ENST00000615335.4

FOXN3-219, Transcript of forkhead box N3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FOXN3, Length 2,421 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-219ENST00000615335 HERV-K104P61576 105 aa10.96□□□□□ -0.65
FOXN3-219ENST00000615335 PLCXD3Q63HM9 321 aa10.96□□□□□ -0.65
FOXN3-219ENST00000615335 CCDC71LQ8N9Z2 235 aa10.96□□□□□ -0.65
FOXN3-219ENST00000615335 OR52M1Q8NGK5 317 aa10.96□□□□□ -0.65
FOXN3-219ENST00000615335 OR5C1Q8NGR4 320 aa10.96□□□□□ -0.65
FOXN3-219ENST00000615335 PIGCQ92535 297 aa10.96□□□□□ -0.65
FOXN3-219ENST00000615335 MSI2Q96DH6 328 aaKnown RBP10.96□□□□□ -0.65
FOXN3-219ENST00000615335 ZNF586Q9NXT0 402 aa10.96□□□□□ -0.65
FOXN3-219ENST00000615335 ADGRG4Q8IZF6 3080 aa10.96□□□□□ -0.65
FOXN3-219ENST00000615335 FAM208BQ5VWN6 2430 aa10.96□□□□□ -0.66
FOXN3-219ENST00000615335 FAM90A27PA6NNH2 459 aa10.96□□□□□ -0.66
FOXN3-219ENST00000615335 PHF1O43189 567 aaPredicted RBP10.96□□□□□ -0.66
FOXN3-219ENST00000615335 CCL2P13500 99 aa10.96□□□□□ -0.66
FOXN3-219ENST00000615335 AADACP22760 399 aa10.96□□□□□ -0.66
FOXN3-219ENST00000615335 GABRA2P47869 451 aa10.96□□□□□ -0.66
FOXN3-219ENST00000615335 PDCD1Q15116 288 aa10.96□□□□□ -0.66
FOXN3-219ENST00000615335 WDR31Q8NA23 367 aa10.96□□□□□ -0.66
FOXN3-219ENST00000615335 OR11L1Q8NGX0 322 aa10.96□□□□□ -0.66
FOXN3-219ENST00000615335 TMEM171Q8WVE6 324 aa10.96□□□□□ -0.66
FOXN3-219ENST00000615335 ZNF665Q9H7R5 613 aa10.96□□□□□ -0.66
FOXN3-219ENST00000615335 PATZ1Q9HBE1 687 aaKnown RBP10.96□□□□□ -0.66
FOXN3-219ENST00000615335 C5orf49A4QMS7 147 aa10.95□□□□□ -0.66
FOXN3-219ENST00000615335 DIRC3C9JPN6 131 aa10.95□□□□□ -0.66
FOXN3-219ENST00000615335 C16orf97H3BN30 126 aa10.95□□□□□ -0.66
FOXN3-219ENST00000615335 VENTXO95231 258 aa10.95□□□□□ -0.66
FOXN3-219ENST00000615335 IL3RAP26951 378 aa10.95□□□□□ -0.66
FOXN3-219ENST00000615335 HINT1P49773 126 aaPredicted RBP10.95□□□□□ -0.66
FOXN3-219ENST00000615335 PET117Q6UWS5 81 aa10.95□□□□□ -0.66
FOXN3-219ENST00000615335 NIT1Q86X76 327 aa10.95□□□□□ -0.66
FOXN3-219ENST00000615335 TMEM252Q8N6L7 170 aa10.95□□□□□ -0.66
FOXN3-219ENST00000615335 ATP5SQ99766 215 aa10.95□□□□□ -0.66
FOXN3-219ENST00000615335 REPIN1Q9BWE0 567 aaKnown RBP10.95□□□□□ -0.66
FOXN3-219ENST00000615335 ZNF442Q9H7R0 627 aa10.95□□□□□ -0.66
FOXN3-219ENST00000615335 SPTBN1Q01082 2364 aaKnown RBP10.95□□□□□ -0.66
FOXN3-219ENST00000615335 ZNF816-ZNF321PA0A0X1KG74 233 aa10.95□□□□□ -0.66
FOXN3-219ENST00000615335 CD99P14209 185 aa10.95□□□□□ -0.66
FOXN3-219ENST00000615335 TSPOP30536 169 aa10.95□□□□□ -0.66
FOXN3-219ENST00000615335 GNRHRP30968 328 aa10.95□□□□□ -0.66
FOXN3-219ENST00000615335 RBM11P57052 281 aaKnown RBP10.95□□□□□ -0.66
FOXN3-219ENST00000615335 OR8B8Q15620 311 aa10.95□□□□□ -0.66
FOXN3-219ENST00000615335 TIMM23BQ5SRD1 257 aa10.95□□□□□ -0.66
FOXN3-219ENST00000615335 OBP2BQ9NPH6 170 aa10.95□□□□□ -0.66
FOXN3-219ENST00000615335 ARID1AO14497 2285 aa10.94□□□□□ -0.66
FOXN3-219ENST00000615335 IGHV2-26A0A0B4J1V2 119 aa10.94□□□□□ -0.66
FOXN3-219ENST00000615335 CORTO00230 105 aa10.94□□□□□ -0.66
FOXN3-219ENST00000615335 DYNLT3P51808 116 aa10.94□□□□□ -0.66
FOXN3-219ENST00000615335 YPEL3P61236 119 aaPredicted RBP10.94□□□□□ -0.66
FOXN3-219ENST00000615335 PPP1CBP62140 327 aa10.94□□□□□ -0.66
FOXN3-219ENST00000615335 OR4S2Q8NH73 311 aa10.94□□□□□ -0.66
FOXN3-219ENST00000615335 SAMD10Q9BYL1 202 aa10.94□□□□□ -0.66
FOXN3-219ENST00000615335 HEATR1Q9H583 2144 aaKnown RBP10.94□□□□□ -0.66
FOXN3-219ENST00000615335 MYO18BQ8IUG5 2567 aa10.94□□□□□ -0.66
FOXN3-219ENST00000615335 A0A0U1RQK1 487 aa10.94□□□□□ -0.66
FOXN3-219ENST00000615335 NKX2-6A6NCS4 301 aa10.94□□□□□ -0.66
FOXN3-219ENST00000615335 SMPD2O60906 423 aa10.94□□□□□ -0.66
FOXN3-219ENST00000615335 CELA3BP08861 270 aa10.94□□□□□ -0.66
FOXN3-219ENST00000615335 SCGB1A1P11684 91 aa10.94□□□□□ -0.66
FOXN3-219ENST00000615335 CD33P20138 364 aa10.94□□□□□ -0.66
FOXN3-219ENST00000615335 LRRC10Q5BKY1 277 aa10.94□□□□□ -0.66
FOXN3-219ENST00000615335 MEX3BQ6ZN04 569 aaKnown RBP10.94□□□□□ -0.66
FOXN3-219ENST00000615335 PINX1Q96BK5 328 aaKnown RBP10.94□□□□□ -0.66
FOXN3-219ENST00000615335 SPIN2AQ99865 258 aa10.94□□□□□ -0.66
FOXN3-219ENST00000615335 SPIN2BQ9BPZ2 258 aa10.94□□□□□ -0.66
FOXN3-219ENST00000615335 MEGF9Q9H1U4 602 aa10.94□□□□□ -0.66
FOXN3-219ENST00000615335 SLC25A15Q9Y619 301 aa10.94□□□□□ -0.66
FOXN3-219ENST00000615335 IGLC7A0M8Q6 106 aa10.93□□□□□ -0.66
FOXN3-219ENST00000615335 OR7C1O76099 320 aaPredicted RBP10.93□□□□□ -0.66
FOXN3-219ENST00000615335 PPYP01298 95 aa10.93□□□□□ -0.66
FOXN3-219ENST00000615335 IFNA5P01569 189 aa10.93□□□□□ -0.66
FOXN3-219ENST00000615335 NKX2-1P43699 371 aaPredicted RBP10.93□□□□□ -0.66
FOXN3-219ENST00000615335 SRPXP78539 464 aa10.93□□□□□ -0.66
FOXN3-219ENST00000615335 RUNX1Q01196 453 aa10.93□□□□□ -0.66
FOXN3-219ENST00000615335 CLEC12BQ2HXU8 276 aa10.93□□□□□ -0.66
FOXN3-219ENST00000615335 Q6ZPA2 131 aa10.93□□□□□ -0.66
FOXN3-219ENST00000615335 TMEM144Q7Z5S9 345 aa10.93□□□□□ -0.66
FOXN3-219ENST00000615335 SIGLECL1Q8N7X8 197 aa10.93□□□□□ -0.66
FOXN3-219ENST00000615335 ZNF596Q8TC21 504 aa10.93□□□□□ -0.66
FOXN3-219ENST00000615335 POM121L2Q96KW2 1035 aa10.93□□□□□ -0.66
FOXN3-219ENST00000615335 C3orf85A0A1B0GTC6 90 aa10.93□□□□□ -0.66
FOXN3-219ENST00000615335 A0A1B0GUS0 222 aa10.93□□□□□ -0.66
FOXN3-219ENST00000615335 HS3ST1O14792 307 aa10.93□□□□□ -0.66
FOXN3-219ENST00000615335 MPPED1O15442 326 aa10.93□□□□□ -0.66
FOXN3-219ENST00000615335 IGKV3-15P01624 115 aa10.93□□□□□ -0.66
FOXN3-219ENST00000615335 PSG1P11464 419 aa10.93□□□□□ -0.66
FOXN3-219ENST00000615335 OMGP23515 440 aa10.93□□□□□ -0.66
FOXN3-219ENST00000615335 MEF2BQ02080 365 aaPredicted RBP10.93□□□□□ -0.66
FOXN3-219ENST00000615335 FOXL1Q12952 345 aa10.93□□□□□ -0.66
FOXN3-219ENST00000615335 CDSNQ15517 529 aa10.93□□□□□ -0.66
FOXN3-219ENST00000615335 TBC1D28Q2M2D7 210 aa10.93□□□□□ -0.66
FOXN3-219ENST00000615335 CALHM1Q8IU99 346 aa10.93□□□□□ -0.66
FOXN3-219ENST00000615335 TMEM217Q8N7C4 229 aa10.93□□□□□ -0.66
FOXN3-219ENST00000615335 ZNF611Q8N823 705 aa10.93□□□□□ -0.66
FOXN3-219ENST00000615335 RALYQ9UKM9 306 aaKnown RBP10.93□□□□□ -0.66
FOXN3-219ENST00000615335 ZG16O60844 167 aa10.92□□□□□ -0.66
FOXN3-219ENST00000615335 RAMP3O60896 148 aa10.92□□□□□ -0.66
FOXN3-219ENST00000615335 C22orf34Q6ZV56 151 aa10.92□□□□□ -0.66
FOXN3-219ENST00000615335 Q6ZVH6 145 aa10.92□□□□□ -0.66
FOXN3-219ENST00000615335 BATF2Q8N1L9 274 aa10.92□□□□□ -0.66
FOXN3-219ENST00000615335 OR52L2PQ8NGH6 319 aa10.92□□□□□ -0.66
FOXN3-219ENST00000615335 FAM216AQ8WUB2 273 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms