RNA–Protein interactions for RNA: ENST00000613856.4

SLIRP-212, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SLIRP, Length 420 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-212ENST00000613856 CHIAQ9BZP6 476 aa9.17□□□□□ -0.94
SLIRP-212ENST00000613856 MS4A7Q9GZW8 240 aaPredicted RBP9.17□□□□□ -0.94
SLIRP-212ENST00000613856 RANBP3Q9H6Z4 567 aaPredicted RBP9.17□□□□□ -0.94
SLIRP-212ENST00000613856 PRKDCP78527 4128 aaKnown RBP9.17□□□□□ -0.94
SLIRP-212ENST00000613856 IGHV3-72A0A0B4J1Y9 119 aa9.16□□□□□ -0.94
SLIRP-212ENST00000613856 G3V3Q6 166 aa9.16□□□□□ -0.94
SLIRP-212ENST00000613856 SHOXO15266 292 aa9.16□□□□□ -0.94
SLIRP-212ENST00000613856 PITX3O75364 302 aa9.16□□□□□ -0.94
SLIRP-212ENST00000613856 SPDEFO95238 335 aa9.16□□□□□ -0.94
SLIRP-212ENST00000613856 IL6RP08887 468 aaPredicted RBP9.16□□□□□ -0.94
SLIRP-212ENST00000613856 FGF2P09038 288 aa9.16□□□□□ -0.94
SLIRP-212ENST00000613856 BRS3P32247 399 aa9.16□□□□□ -0.94
SLIRP-212ENST00000613856 COMPP49747 757 aaPredicted RBP9.16□□□□□ -0.94
SLIRP-212ENST00000613856 BRD3OSQ6XYD6 125 aa9.16□□□□□ -0.94
SLIRP-212ENST00000613856 THNSL2Q86YJ6 484 aa9.16□□□□□ -0.94
SLIRP-212ENST00000613856 FOXRED2Q8IWF2 684 aa9.16□□□□□ -0.94
SLIRP-212ENST00000613856 PUSL1Q8N0Z8 303 aaKnown RBP9.16□□□□□ -0.94
SLIRP-212ENST00000613856 DMBX1Q8NFW5 382 aa9.16□□□□□ -0.94
SLIRP-212ENST00000613856 OR2T35Q8NGX2 323 aa9.16□□□□□ -0.94
SLIRP-212ENST00000613856 SGMS2Q8NHU3 365 aa9.16□□□□□ -0.94
SLIRP-212ENST00000613856 NANPQ8TBE9 248 aa9.16□□□□□ -0.94
SLIRP-212ENST00000613856 MEGF9Q9H1U4 602 aa9.16□□□□□ -0.94
SLIRP-212ENST00000613856 ZFP57Q9NU63 452 aa9.16□□□□□ -0.94
SLIRP-212ENST00000613856 TMEM140Q9NV12 185 aa9.16□□□□□ -0.94
SLIRP-212ENST00000613856 BET1LQ9NYM9 111 aa9.16□□□□□ -0.94
SLIRP-212ENST00000613856 CACNG5Q9UF02 275 aa9.16□□□□□ -0.94
SLIRP-212ENST00000613856 NUP50Q9UKX7 468 aa9.16□□□□□ -0.94
SLIRP-212ENST00000613856 TNCP24821 2201 aa9.15□□□□□ -0.94
SLIRP-212ENST00000613856 IGHV3OR16-10A0A075B7F0 116 aa9.15□□□□□ -0.94
SLIRP-212ENST00000613856 A0A0U1RQK1 487 aa9.15□□□□□ -0.94
SLIRP-212ENST00000613856 TMEM89A2RUT3 159 aa9.15□□□□□ -0.94
SLIRP-212ENST00000613856 SRRM4A7MD48 611 aaKnown RBP9.15□□□□□ -0.94
SLIRP-212ENST00000613856 FAM90A26D6RGX4 464 aa9.15□□□□□ -0.94
SLIRP-212ENST00000613856 MOSP00540 346 aa9.15□□□□□ -0.94
SLIRP-212ENST00000613856 IGLV2-23P01705 113 aa9.15□□□□□ -0.94
SLIRP-212ENST00000613856 C1QBP02746 253 aa9.15□□□□□ -0.94
SLIRP-212ENST00000613856 FBP1P09467 338 aa9.15□□□□□ -0.94
SLIRP-212ENST00000613856 SAA1P0DJI8 122 aaPredicted RBP9.15□□□□□ -0.94
SLIRP-212ENST00000613856 UBE2KP61086 200 aa9.15□□□□□ -0.94
SLIRP-212ENST00000613856 RPS16P62249 146 aaKnown RBP9.15□□□□□ -0.94
SLIRP-212ENST00000613856 FGL1Q08830 312 aa9.15□□□□□ -0.94
SLIRP-212ENST00000613856 AANATQ16613 207 aa9.15□□□□□ -0.94
SLIRP-212ENST00000613856 OR4A47Q6IF82 309 aa9.15□□□□□ -0.94
SLIRP-212ENST00000613856 Q6ZRM9 215 aa9.15□□□□□ -0.94
SLIRP-212ENST00000613856 Q8N6K4 173 aa9.15□□□□□ -0.94
SLIRP-212ENST00000613856 OR2T10Q8NGZ9 312 aa9.15□□□□□ -0.94
SLIRP-212ENST00000613856 OR4A5Q8NH83 315 aa9.15□□□□□ -0.94
SLIRP-212ENST00000613856 VSTM2AQ8TAG5 236 aa9.15□□□□□ -0.94
SLIRP-212ENST00000613856 PPP1R1CQ8WVI7 109 aa9.15□□□□□ -0.94
SLIRP-212ENST00000613856 WDR89Q96FK6 387 aaPredicted RBP9.15□□□□□ -0.94
SLIRP-212ENST00000613856 TSNAXQ99598 290 aaKnown RBP9.15□□□□□ -0.94
SLIRP-212ENST00000613856 CACFD1Q9UGQ2 172 aa9.15□□□□□ -0.94
SLIRP-212ENST00000613856 TET2Q6N021 2002 aaPredicted RBP9.15□□□□□ -0.94
SLIRP-212ENST00000613856 C15orf61A6NNL5 157 aa9.14□□□□□ -0.95
SLIRP-212ENST00000613856 KBTBD11O94819 623 aa9.14□□□□□ -0.95
SLIRP-212ENST00000613856 MPC2O95563 127 aa9.14□□□□□ -0.95
SLIRP-212ENST00000613856 IGKV1D-33P01593 117 aa9.14□□□□□ -0.95
SLIRP-212ENST00000613856 IGKV1-33P01594 117 aa9.14□□□□□ -0.95
SLIRP-212ENST00000613856 SNRNP70P08621 437 aaKnown RBP9.14□□□□□ -0.95
SLIRP-212ENST00000613856 OR9G9P0C7N8 305 aa9.14□□□□□ -0.95
SLIRP-212ENST00000613856 PET100P0DJ07 73 aa9.14□□□□□ -0.95
SLIRP-212ENST00000613856 PSMB6P28072 239 aa9.14□□□□□ -0.95
SLIRP-212ENST00000613856 RELBQ01201 579 aa9.14□□□□□ -0.95
SLIRP-212ENST00000613856 IZUMO4Q1ZYL8 232 aa9.14□□□□□ -0.95
SLIRP-212ENST00000613856 VMA21Q3ZAQ7 101 aa9.14□□□□□ -0.95
SLIRP-212ENST00000613856 SSX9Q7RTT3 188 aa9.14□□□□□ -0.95
SLIRP-212ENST00000613856 ZNF429Q86V71 674 aa9.14□□□□□ -0.95
SLIRP-212ENST00000613856 VKORC1L1Q8N0U8 176 aa9.14□□□□□ -0.95
SLIRP-212ENST00000613856 TEX45Q8NA69 505 aa9.14□□□□□ -0.95
SLIRP-212ENST00000613856 NPBQ8NG41 125 aa9.14□□□□□ -0.95
SLIRP-212ENST00000613856 OR1S1Q8NH92 325 aa9.14□□□□□ -0.95
SLIRP-212ENST00000613856 TMEM167AQ8TBQ9 72 aa9.14□□□□□ -0.95
SLIRP-212ENST00000613856 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.14□□□□□ -0.95
SLIRP-212ENST00000613856 GSKIPQ9P0R6 139 aa9.14□□□□□ -0.95
SLIRP-212ENST00000613856 FOXA2Q9Y261 457 aaPredicted RBP9.14□□□□□ -0.95
SLIRP-212ENST00000613856 POMT1Q9Y6A1 747 aa9.14□□□□□ -0.95
SLIRP-212ENST00000613856 TRAV14DV4A0A0A6YYC5 116 aa9.13□□□□□ -0.95
SLIRP-212ENST00000613856 UPK2O00526 184 aa9.13□□□□□ -0.95
SLIRP-212ENST00000613856 ST8SIA3O43173 380 aa9.13□□□□□ -0.95
SLIRP-212ENST00000613856 NDUFA3O95167 84 aa9.13□□□□□ -0.95
SLIRP-212ENST00000613856 MBPP02686 304 aaPredicted RBP9.13□□□□□ -0.95
SLIRP-212ENST00000613856 CRYGBP07316 175 aa9.13□□□□□ -0.95
SLIRP-212ENST00000613856 FAM106CPP0CH98 169 aa9.13□□□□□ -0.95
SLIRP-212ENST00000613856 SLC25A4P12235 298 aa9.13□□□□□ -0.95
SLIRP-212ENST00000613856 LYL1P12980 280 aa9.13□□□□□ -0.95
SLIRP-212ENST00000613856 NKX2-1P43699 371 aaPredicted RBP9.13□□□□□ -0.95
SLIRP-212ENST00000613856 ID3Q02535 119 aa9.13□□□□□ -0.95
SLIRP-212ENST00000613856 RAB32Q13637 225 aa9.13□□□□□ -0.95
SLIRP-212ENST00000613856 LRRC75BQ2VPJ9 315 aa9.13□□□□□ -0.95
SLIRP-212ENST00000613856 ZFP69Q49AA0 526 aa9.13□□□□□ -0.95
SLIRP-212ENST00000613856 AWAT1Q58HT5 328 aa9.13□□□□□ -0.95
SLIRP-212ENST00000613856 PRR31Q5SQ13 230 aa9.13□□□□□ -0.95
SLIRP-212ENST00000613856 OR8H1Q8NGG4 311 aa9.13□□□□□ -0.95
SLIRP-212ENST00000613856 OR52E5Q8NH55 327 aa9.13□□□□□ -0.95
SLIRP-212ENST00000613856 EAF1Q96JC9 268 aaPredicted RBP9.13□□□□□ -0.95
SLIRP-212ENST00000613856 TMEM14BQ9NUH8 114 aa9.13□□□□□ -0.95
SLIRP-212ENST00000613856 HSPB7Q9UBY9 170 aa9.13□□□□□ -0.95
SLIRP-212ENST00000613856 PRNDQ9UKY0 176 aa9.13□□□□□ -0.95
SLIRP-212ENST00000613856 FAM96BQ9Y3D0 163 aa9.13□□□□□ -0.95
SLIRP-212ENST00000613856 SMLR1H3BR10 107 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms