RNA–Protein interactions for RNA: ENST00000613547.4

MDC1-209, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 5 BASIC

Gene MDC1, Length 830 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-209ENST00000613547 KCNIP3Q9Y2W7 256 aa10.45□□□□□ -0.74
MDC1-209ENST00000613547 KRASP01116 189 aa10.44□□□□□ -0.74
MDC1-209ENST00000613547 MAS1LP35410 378 aa10.44□□□□□ -0.74
MDC1-209ENST00000613547 KRTAP10-3P60369 221 aa10.44□□□□□ -0.74
MDC1-209ENST00000613547 RPL8P62917 257 aaKnown RBP10.44□□□□□ -0.74
MDC1-209ENST00000613547 PJVKQ0ZLH3 352 aa10.44□□□□□ -0.74
MDC1-209ENST00000613547 POU2AF1Q16633 256 aa10.44□□□□□ -0.74
MDC1-209ENST00000613547 ECSCRQ19T08 205 aa10.44□□□□□ -0.74
MDC1-209ENST00000613547 TRIM16LQ309B1 348 aa10.44□□□□□ -0.74
MDC1-209ENST00000613547 ZNF585BQ52M93 769 aa10.44□□□□□ -0.74
MDC1-209ENST00000613547 OR4A47Q6IF82 309 aa10.44□□□□□ -0.74
MDC1-209ENST00000613547 TEX38Q6PEX7 206 aa10.44□□□□□ -0.74
MDC1-209ENST00000613547 PUSL1Q8N0Z8 303 aaKnown RBP10.44□□□□□ -0.74
MDC1-209ENST00000613547 SGMS2Q8NHU3 365 aa10.44□□□□□ -0.74
MDC1-209ENST00000613547 WIPF2Q8TF74 440 aaPredicted RBP10.44□□□□□ -0.74
MDC1-209ENST00000613547 TMEM68Q96MH6 324 aa10.44□□□□□ -0.74
MDC1-209ENST00000613547 TSC22D3Q99576 134 aa10.44□□□□□ -0.74
MDC1-209ENST00000613547 NAA60Q9H7X0 242 aa10.44□□□□□ -0.74
MDC1-209ENST00000613547 ZNF430Q9H8G1 570 aaPredicted RBP10.44□□□□□ -0.74
MDC1-209ENST00000613547 TMEM140Q9NV12 185 aa10.44□□□□□ -0.74
MDC1-209ENST00000613547 WSB1Q9Y6I7 421 aa10.44□□□□□ -0.74
MDC1-209ENST00000613547 CRYM-AS1A6NIL9 109 aa10.43□□□□□ -0.74
MDC1-209ENST00000613547 SNAPC5O75971 98 aa10.43□□□□□ -0.74
MDC1-209ENST00000613547 FGF2P09038 288 aa10.43□□□□□ -0.74
MDC1-209ENST00000613547 CD28P10747 220 aa10.43□□□□□ -0.74
MDC1-209ENST00000613547 ANXA3P12429 323 aa10.43□□□□□ -0.74
MDC1-209ENST00000613547 AKR1C4P17516 323 aa10.43□□□□□ -0.74
MDC1-209ENST00000613547 CRIP2P52943 208 aaPredicted RBP10.43□□□□□ -0.74
MDC1-209ENST00000613547 NDPQ00604 133 aa10.43□□□□□ -0.74
MDC1-209ENST00000613547 DHODHQ02127 395 aa10.43□□□□□ -0.74
MDC1-209ENST00000613547 SRSF4Q08170 494 aaKnown RBP10.43□□□□□ -0.74
MDC1-209ENST00000613547 AKIRIN2Q53H80 203 aa10.43□□□□□ -0.74
MDC1-209ENST00000613547 CXorf66Q5JRM2 361 aaPredicted RBP10.43□□□□□ -0.74
MDC1-209ENST00000613547 KHDC1LQ5JSQ8 128 aa10.43□□□□□ -0.74
MDC1-209ENST00000613547 TMEM65Q6PI78 240 aa10.43□□□□□ -0.74
MDC1-209ENST00000613547 UNQ5815/PRO19632Q6UWF5 114 aa10.43□□□□□ -0.74
MDC1-209ENST00000613547 TMED4Q7Z7H5 227 aa10.43□□□□□ -0.74
MDC1-209ENST00000613547 ZNF329Q86UD4 541 aa10.43□□□□□ -0.74
MDC1-209ENST00000613547 CADM3Q8N126 398 aa10.43□□□□□ -0.74
MDC1-209ENST00000613547 TP53RKQ96S44 253 aa10.43□□□□□ -0.74
MDC1-209ENST00000613547 PHB2Q99623 299 aa10.43□□□□□ -0.74
MDC1-209ENST00000613547 SPIN2AQ99865 258 aa10.43□□□□□ -0.74
MDC1-209ENST00000613547 SPIN2BQ9BPZ2 258 aa10.43□□□□□ -0.74
MDC1-209ENST00000613547 FAM103A1Q9BTL3 118 aaKnown RBP10.43□□□□□ -0.74
MDC1-209ENST00000613547 TMEM222Q9H0R3 208 aa10.43□□□□□ -0.74
MDC1-209ENST00000613547 VSIG4Q9Y279 399 aa10.43□□□□□ -0.74
MDC1-209ENST00000613547 PIGBOS1A0A0B4J2F0 54 aa10.42□□□□□ -0.74
MDC1-209ENST00000613547 TCRBV4S1A1TA0A5B7 111 aa10.42□□□□□ -0.74
MDC1-209ENST00000613547 G3V318 75 aa10.42□□□□□ -0.74
MDC1-209ENST00000613547 M0QZ24 198 aa10.42□□□□□ -0.74
MDC1-209ENST00000613547 ARPC1BO15143 372 aaKnown RBP10.42□□□□□ -0.74
MDC1-209ENST00000613547 LYRM1O43325 122 aa10.42□□□□□ -0.74
MDC1-209ENST00000613547 IGHG4P01861 327 aa10.42□□□□□ -0.74
MDC1-209ENST00000613547 ELANEP08246 267 aa10.42□□□□□ -0.74
MDC1-209ENST00000613547 HLA-GP17693 338 aa10.42□□□□□ -0.74
MDC1-209ENST00000613547 UCP1P25874 307 aa10.42□□□□□ -0.74
MDC1-209ENST00000613547 G6PCP35575 357 aa10.42□□□□□ -0.74
MDC1-209ENST00000613547 AKR1C2P52895 323 aa10.42□□□□□ -0.74
MDC1-209ENST00000613547 FOXE3Q13461 319 aa10.42□□□□□ -0.74
MDC1-209ENST00000613547 SP6Q3SY56 376 aa10.42□□□□□ -0.74
MDC1-209ENST00000613547 H2BFWTQ7Z2G1 175 aa10.42□□□□□ -0.74
MDC1-209ENST00000613547 CENPSQ8N2Z9 138 aa10.42□□□□□ -0.74
MDC1-209ENST00000613547 LFNGQ8NES3 379 aa10.42□□□□□ -0.74
MDC1-209ENST00000613547 OR5M8Q8NGP6 311 aa10.42□□□□□ -0.74
MDC1-209ENST00000613547 RNASE11Q8TAA1 199 aaKnown RBP10.42□□□□□ -0.74
MDC1-209ENST00000613547 SRSF12Q8WXF0 261 aaKnown RBP10.42□□□□□ -0.74
MDC1-209ENST00000613547 COMMD5Q9GZQ3 224 aa10.42□□□□□ -0.74
MDC1-209ENST00000613547 FOXA2Q9Y261 457 aaPredicted RBP10.42□□□□□ -0.74
MDC1-209ENST00000613547 FBXO7Q9Y3I1 522 aa10.42□□□□□ -0.74
MDC1-209ENST00000613547 NUBP2Q9Y5Y2 271 aa10.42□□□□□ -0.74
MDC1-209ENST00000613547 A0A1W2PN81 502 aa10.41□□□□□ -0.74
MDC1-209ENST00000613547 MSGN1A6NI15 193 aa10.41□□□□□ -0.74
MDC1-209ENST00000613547 UPK2O00526 184 aa10.41□□□□□ -0.74
MDC1-209ENST00000613547 UPK1BO75841 260 aa10.41□□□□□ -0.74
MDC1-209ENST00000613547 NDUFB6O95139 128 aa10.41□□□□□ -0.74
MDC1-209ENST00000613547 OR5AC1P0C628 307 aa10.41□□□□□ -0.74
MDC1-209ENST00000613547 EGR2P11161 476 aaPredicted RBP10.41□□□□□ -0.74
MDC1-209ENST00000613547 PPIFP30405 207 aaKnown RBP10.41□□□□□ -0.74
MDC1-209ENST00000613547 CHRNA7P36544 502 aa10.41□□□□□ -0.74
MDC1-209ENST00000613547 RPL27AP46776 148 aaKnown RBP10.41□□□□□ -0.74
MDC1-209ENST00000613547 CCR6P51684 374 aa10.41□□□□□ -0.74
MDC1-209ENST00000613547 SRPXP78539 464 aa10.41□□□□□ -0.74
MDC1-209ENST00000613547 CD83Q01151 205 aa10.41□□□□□ -0.74
MDC1-209ENST00000613547 CFHR3Q02985 330 aa10.41□□□□□ -0.74
MDC1-209ENST00000613547 MRGPRG-AS1Q2M3A8 158 aa10.41□□□□□ -0.74
MDC1-209ENST00000613547 C2orf68Q2NKX9 166 aa10.41□□□□□ -0.74
MDC1-209ENST00000613547 TMEM128Q5BJH2 165 aa10.41□□□□□ -0.74
MDC1-209ENST00000613547 C10orf99Q6UWK7 81 aa10.41□□□□□ -0.74
MDC1-209ENST00000613547 NDUFA11Q86Y39 141 aa10.41□□□□□ -0.74
MDC1-209ENST00000613547 MINDY2Q8NBR6 621 aa10.41□□□□□ -0.74
MDC1-209ENST00000613547 ADAD2Q8NCV1 583 aaKnown RBP10.41□□□□□ -0.74
MDC1-209ENST00000613547 RRNAD1Q96FB5 475 aaKnown RBP10.41□□□□□ -0.74
MDC1-209ENST00000613547 GALNT14Q96FL9 552 aa10.41□□□□□ -0.74
MDC1-209ENST00000613547 CITED2Q99967 270 aaPredicted RBP10.41□□□□□ -0.74
MDC1-209ENST00000613547 FKBP11Q9NYL4 201 aa10.41□□□□□ -0.74
MDC1-209ENST00000613547 PRNDQ9UKY0 176 aa10.41□□□□□ -0.74
MDC1-209ENST00000613547 TSSC4Q9Y5U2 329 aaPredicted RBP10.41□□□□□ -0.74
MDC1-209ENST00000613547 PF4V1P10720 104 aa10.4□□□□□ -0.74
MDC1-209ENST00000613547 VAMP1P23763 118 aa10.4□□□□□ -0.74
MDC1-209ENST00000613547 SSBP2P81877 361 aaPredicted RBP10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 107.4 ms