RNA–Protein interactions for RNA: ENST00000613459.4

HMGXB3-206, Transcript of HMG-box containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HMGXB3, Length 5,567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-206ENST00000613459 NEU1Q99519 415 aa14.85□□□□□ -0.03
HMGXB3-206ENST00000613459 RP1L1Q8IWN7 2480 aaPredicted RBP14.85□□□□□ -0.03
HMGXB3-206ENST00000613459 ARFGEF1Q9Y6D6 1849 aa14.85□□□□□ -0.03
HMGXB3-206ENST00000613459 IGKV3-11P04433 115 aa14.85□□□□□ -0.03
HMGXB3-206ENST00000613459 HIST1H1AQ02539 215 aaPredicted RBP14.85□□□□□ -0.03
HMGXB3-206ENST00000613459 FAM90A1Q86YD7 464 aa14.85□□□□□ -0.03
HMGXB3-206ENST00000613459 DRAM1Q8N682 238 aa14.85□□□□□ -0.03
HMGXB3-206ENST00000613459 FADS6Q8N9I5 356 aa14.85□□□□□ -0.03
HMGXB3-206ENST00000613459 GPX4P36969 197 aaPredicted RBP14.84□□□□□ -0.03
HMGXB3-206ENST00000613459 MEF2CQ06413 473 aaPredicted RBP14.84□□□□□ -0.03
HMGXB3-206ENST00000613459 PLAUP00749 431 aa14.84□□□□□ -0.03
HMGXB3-206ENST00000613459 PDLIM4P50479 330 aa14.84□□□□□ -0.03
HMGXB3-206ENST00000613459 ARL6IP6Q8N6S5 226 aa14.84□□□□□ -0.03
HMGXB3-206ENST00000613459 SRXN1Q9BYN0 137 aa14.84□□□□□ -0.03
HMGXB3-206ENST00000613459 VCX2Q9H322 139 aa14.84□□□□□ -0.03
HMGXB3-206ENST00000613459 A0A1W2PQM1 296 aa14.84□□□□□ -0.03
HMGXB3-206ENST00000613459 GRIFINA4D1Z8 144 aa14.84□□□□□ -0.03
HMGXB3-206ENST00000613459 RNFT1Q5M7Z0 435 aa14.84□□□□□ -0.03
HMGXB3-206ENST00000613459 SLX1AQ9BQ83 275 aa14.84□□□□□ -0.03
HMGXB3-206ENST00000613459 H7C1H1 209 aa14.84□□□□□ -0.03
HMGXB3-206ENST00000613459 CYP2G1PQ6ZSU1 146 aa14.84□□□□□ -0.03
HMGXB3-206ENST00000613459 WDYHV1Q96HA8 205 aa14.84□□□□□ -0.03
HMGXB3-206ENST00000613459 A0A087WWC5 75 aa14.84□□□□□ -0.03
HMGXB3-206ENST00000613459 IGHV3-72A0A0B4J1Y9 119 aa14.84□□□□□ -0.03
HMGXB3-206ENST00000613459 KLF4O43474 513 aa14.84□□□□□ -0.03
HMGXB3-206ENST00000613459 ZNF708P17019 499 aa14.84□□□□□ -0.03
HMGXB3-206ENST00000613459 SNRPD3P62318 126 aaKnown RBP14.84□□□□□ -0.03
HMGXB3-206ENST00000613459 CTAG1AP78358 180 aa14.84□□□□□ -0.03
HMGXB3-206ENST00000613459 RTN4RL2Q86UN3 420 aa14.84□□□□□ -0.03
HMGXB3-206ENST00000613459 FOXJ2Q9P0K8 574 aa14.84□□□□□ -0.03
HMGXB3-206ENST00000613459 NINQ8N4C6 2090 aa14.84□□□□□ -0.03
HMGXB3-206ENST00000613459 SCN4AP35499 1836 aa14.83□□□□□ -0.03
HMGXB3-206ENST00000613459 ZP1P60852 638 aa14.83□□□□□ -0.03
HMGXB3-206ENST00000613459 SAMD13Q5VXD3 122 aa14.83□□□□□ -0.03
HMGXB3-206ENST00000613459 ASPHD2Q6ICH7 369 aa14.83□□□□□ -0.03
HMGXB3-206ENST00000613459 IL36BQ9NZH7 164 aa14.83□□□□□ -0.03
HMGXB3-206ENST00000613459 Q6AWC8 147 aa14.83□□□□□ -0.04
HMGXB3-206ENST00000613459 GPX1P07203 203 aa14.83□□□□□ -0.04
HMGXB3-206ENST00000613459 Q6ZT83 130 aa14.83□□□□□ -0.04
HMGXB3-206ENST00000613459 CENPWQ5EE01 88 aa14.83□□□□□ -0.04
HMGXB3-206ENST00000613459 IGHV1-69-2A0A0G2JMI3 117 aa14.82□□□□□ -0.04
HMGXB3-206ENST00000613459 DOCK5Q9H7D0 1870 aa14.82□□□□□ -0.04
HMGXB3-206ENST00000613459 MIA3Q5JRA6 1907 aa14.82□□□□□ -0.04
HMGXB3-206ENST00000613459 FAM131CQ96AQ9 280 aa14.82□□□□□ -0.04
HMGXB3-206ENST00000613459 ZNF414Q96IQ9 312 aa14.82□□□□□ -0.04
HMGXB3-206ENST00000613459 KCNS1Q96KK3 526 aa14.82□□□□□ -0.04
HMGXB3-206ENST00000613459 MESP2Q0VG99 397 aa14.82□□□□□ -0.04
HMGXB3-206ENST00000613459 C10orf126Q8N4M7 172 aa14.82□□□□□ -0.04
HMGXB3-206ENST00000613459 NEUROG1Q92886 237 aa14.82□□□□□ -0.04
HMGXB3-206ENST00000613459 CLDND2Q8NHS1 167 aa14.82□□□□□ -0.04
HMGXB3-206ENST00000613459 GLRXP35754 106 aa14.82□□□□□ -0.04
HMGXB3-206ENST00000613459 BIVMQ86UB2 503 aa14.82□□□□□ -0.04
HMGXB3-206ENST00000613459 C1QTNF9BB2RNN3 333 aa14.81□□□□□ -0.04
HMGXB3-206ENST00000613459 KIAA1644Q3SXP7 199 aa14.81□□□□□ -0.04
HMGXB3-206ENST00000613459 TIMM23BQ5SRD1 257 aa14.81□□□□□ -0.04
HMGXB3-206ENST00000613459 TMEM190Q8WZ59 177 aa14.81□□□□□ -0.04
HMGXB3-206ENST00000613459 C4orf51C9J302 202 aa14.81□□□□□ -0.04
HMGXB3-206ENST00000613459 PRSS2P07478 247 aa14.81□□□□□ -0.04
HMGXB3-206ENST00000613459 MEIG1Q5JSS6 88 aa14.81□□□□□ -0.04
HMGXB3-206ENST00000613459 OR11H12B2RN74 326 aa14.81□□□□□ -0.04
HMGXB3-206ENST00000613459 NKX2-8O15522 239 aa14.81□□□□□ -0.04
HMGXB3-206ENST00000613459 ATOH7Q8N100 152 aa14.81□□□□□ -0.04
HMGXB3-206ENST00000613459 OR11H1Q8NG94 326 aa14.81□□□□□ -0.04
HMGXB3-206ENST00000613459 OR11H2Q8NH07 326 aa14.81□□□□□ -0.04
HMGXB3-206ENST00000613459 SNRPCP09234 159 aaKnown RBP14.81□□□□□ -0.04
HMGXB3-206ENST00000613459 TCF23Q7RTU1 214 aa14.81□□□□□ -0.04
HMGXB3-206ENST00000613459 KLRB1Q12918 225 aa14.8□□□□□ -0.04
HMGXB3-206ENST00000613459 EAF1Q96JC9 268 aaPredicted RBP14.8□□□□□ -0.04
HMGXB3-206ENST00000613459 ALKBH7Q9BT30 221 aaPredicted RBP14.8□□□□□ -0.04
HMGXB3-206ENST00000613459 COL4A5P29400 1685 aa14.8□□□□□ -0.04
HMGXB3-206ENST00000613459 C9orf172C9J069 976 aa14.8□□□□□ -0.04
HMGXB3-206ENST00000613459 IL6RP08887 468 aaPredicted RBP14.8□□□□□ -0.04
HMGXB3-206ENST00000613459 UCP1P25874 307 aa14.8□□□□□ -0.04
HMGXB3-206ENST00000613459 SPSB2Q99619 263 aa14.8□□□□□ -0.04
HMGXB3-206ENST00000613459 WFDC6Q9BQY6 131 aa14.8□□□□□ -0.04
HMGXB3-206ENST00000613459 IFI27L2Q9H2X8 130 aa14.8□□□□□ -0.04
HMGXB3-206ENST00000613459 GEMIN7Q9H840 131 aaKnown RBP14.8□□□□□ -0.04
HMGXB3-206ENST00000613459 PCM1Q15154 2024 aa14.8□□□□□ -0.04
HMGXB3-206ENST00000613459 ZNF883P0CG24 379 aa14.8□□□□□ -0.04
HMGXB3-206ENST00000613459 TFPI2P48307 235 aa14.8□□□□□ -0.04
HMGXB3-206ENST00000613459 PLXNB2O15031 1838 aa14.8□□□□□ -0.04
HMGXB3-206ENST00000613459 ATP5LO75964 103 aa14.8□□□□□ -0.04
HMGXB3-206ENST00000613459 MRPS18CQ9Y3D5 142 aaKnown RBP14.8□□□□□ -0.04
HMGXB3-206ENST00000613459 ZNF124Q15973 351 aa14.79□□□□□ -0.04
HMGXB3-206ENST00000613459 PTPRZ1P23471 2315 aaPredicted RBP14.79□□□□□ -0.04
HMGXB3-206ENST00000613459 DNAL4O96015 105 aa14.79□□□□□ -0.04
HMGXB3-206ENST00000613459 EGR4Q05215 589 aa14.79□□□□□ -0.04
HMGXB3-206ENST00000613459 FAM159AQ6UWV7 190 aa14.79□□□□□ -0.04
HMGXB3-206ENST00000613459 CACNG8Q8WXS5 425 aa14.79□□□□□ -0.04
HMGXB3-206ENST00000613459 NPIPB3Q92617 1050 aa14.79□□□□□ -0.04
HMGXB3-206ENST00000613459 NPCDR1Q9BY65 106 aa14.79□□□□□ -0.04
HMGXB3-206ENST00000613459 A0A1W2PR77 199 aa14.79□□□□□ -0.04
HMGXB3-206ENST00000613459 CBLN1P23435 193 aa14.79□□□□□ -0.04
HMGXB3-206ENST00000613459 FHITP49789 147 aa14.79□□□□□ -0.04
HMGXB3-206ENST00000613459 ACP7Q6ZNF0 438 aa14.79□□□□□ -0.04
HMGXB3-206ENST00000613459 FMC1Q96HJ9 113 aa14.79□□□□□ -0.04
HMGXB3-206ENST00000613459 DUX5Q96PT3 197 aa14.79□□□□□ -0.04
HMGXB3-206ENST00000613459 MRPL16Q9NX20 251 aaKnown RBP14.79□□□□□ -0.04
HMGXB3-206ENST00000613459 GCSAMLQ5JQS6 135 aa14.79□□□□□ -0.04
HMGXB3-206ENST00000613459 MBNL2Q5VZF2 373 aaKnown RBP14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms