RNA–Protein interactions for RNA: ENST00000612417.4

CDH1-213, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 2,068 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-213ENST00000612417 PRDX2P32119 198 aa12.17□□□□□ -0.46
CDH1-213ENST00000612417 CA7P43166 264 aa12.17□□□□□ -0.46
CDH1-213ENST00000612417 NDUFA6P56556 154 aa12.17□□□□□ -0.46
CDH1-213ENST00000612417 FFAR4Q5NUL3 377 aa12.17□□□□□ -0.46
CDH1-213ENST00000612417 LRP11Q86VZ4 500 aa12.17□□□□□ -0.46
CDH1-213ENST00000612417 DMRTC2Q8IXT2 367 aaPredicted RBP12.17□□□□□ -0.46
CDH1-213ENST00000612417 DIRC2Q96SL1 478 aa12.17□□□□□ -0.46
CDH1-213ENST00000612417 JPT1Q9UK76 154 aa12.17□□□□□ -0.46
CDH1-213ENST00000612417 ITPR1Q14643 2758 aa12.17□□□□□ -0.46
CDH1-213ENST00000612417 SEC14L6B5MCN3 397 aa12.17□□□□□ -0.46
CDH1-213ENST00000612417 PHOX2AO14813 284 aa12.17□□□□□ -0.46
CDH1-213ENST00000612417 GZMHP20718 246 aa12.17□□□□□ -0.46
CDH1-213ENST00000612417 DUTP33316 252 aaKnown RBP12.17□□□□□ -0.46
CDH1-213ENST00000612417 GLRXP35754 106 aa12.17□□□□□ -0.46
CDH1-213ENST00000612417 TFF3Q07654 80 aa12.17□□□□□ -0.46
CDH1-213ENST00000612417 TMEM108Q6UXF1 575 aa12.17□□□□□ -0.46
CDH1-213ENST00000612417 RFESDQ8TAC1 157 aa12.17□□□□□ -0.46
CDH1-213ENST00000612417 R3HDM4Q96D70 268 aa12.17□□□□□ -0.46
CDH1-213ENST00000612417 DSCAML1Q8TD84 2053 aa12.16□□□□□ -0.46
CDH1-213ENST00000612417 ELOA3CA0A087WX78 387 aaPredicted RBP12.16□□□□□ -0.46
CDH1-213ENST00000612417 C15orf62A8K5M9 175 aa12.16□□□□□ -0.46
CDH1-213ENST00000612417 C17orf112F2Z3M2 114 aa12.16□□□□□ -0.46
CDH1-213ENST00000612417 SOX15O60248 233 aa12.16□□□□□ -0.46
CDH1-213ENST00000612417 KLF3P57682 345 aaPredicted RBP12.16□□□□□ -0.46
CDH1-213ENST00000612417 TMEM241Q24JQ0 296 aa12.16□□□□□ -0.46
CDH1-213ENST00000612417 PDLIM3Q53GG5 364 aaPredicted RBP12.16□□□□□ -0.46
CDH1-213ENST00000612417 NCR3LG1Q68D85 454 aa12.16□□□□□ -0.46
CDH1-213ENST00000612417 ZNF709Q8N972 641 aa12.16□□□□□ -0.46
CDH1-213ENST00000612417 OR2Z1Q8NG97 314 aa12.16□□□□□ -0.46
CDH1-213ENST00000612417 GGACTQ9BVM4 153 aa12.16□□□□□ -0.46
CDH1-213ENST00000612417 GAR1Q9NY12 217 aaKnown RBP12.16□□□□□ -0.46
CDH1-213ENST00000612417 IGKV1D-17A0A075B6S4 117 aa12.15□□□□□ -0.46
CDH1-213ENST00000612417 RBFOX2O43251 390 aaKnown RBP eCLIP12.15□□□□□ -0.46
CDH1-213ENST00000612417 YPEL1O60688 119 aa12.15□□□□□ -0.46
CDH1-213ENST00000612417 PROP1O75360 226 aa12.15□□□□□ -0.46
CDH1-213ENST00000612417 RBMXL2O75526 392 aaKnown RBP12.15□□□□□ -0.46
CDH1-213ENST00000612417 HPRT1P00492 218 aa12.15□□□□□ -0.46
CDH1-213ENST00000612417 IFNA10P01566 189 aa12.15□□□□□ -0.46
CDH1-213ENST00000612417 EGR1P18146 543 aa12.15□□□□□ -0.46
CDH1-213ENST00000612417 GPR12P47775 334 aa12.15□□□□□ -0.46
CDH1-213ENST00000612417 NKX6-1P78426 367 aaPredicted RBP12.15□□□□□ -0.46
CDH1-213ENST00000612417 MSMPQ1L6U9 139 aa12.15□□□□□ -0.46
CDH1-213ENST00000612417 TMEM249Q2WGJ8 235 aa12.15□□□□□ -0.46
CDH1-213ENST00000612417 MORN2Q502X0 79 aa12.15□□□□□ -0.46
CDH1-213ENST00000612417 SPNS3Q6ZMD2 512 aa12.15□□□□□ -0.46
CDH1-213ENST00000612417 Q8N7P7 452 aa12.15□□□□□ -0.46
CDH1-213ENST00000612417 RAB24Q969Q5 203 aa12.15□□□□□ -0.46
CDH1-213ENST00000612417 YPEL2Q96QA6 119 aa12.15□□□□□ -0.46
CDH1-213ENST00000612417 DCTN5Q9BTE1 182 aa12.15□□□□□ -0.46
CDH1-213ENST00000612417 DEFB108AA8MXU0 73 aa12.15□□□□□ -0.46
CDH1-213ENST00000612417 MGST3O14880 152 aa12.15□□□□□ -0.46
CDH1-213ENST00000612417 S100A2P29034 98 aa12.15□□□□□ -0.46
CDH1-213ENST00000612417 LINC00205P59089 165 aa12.15□□□□□ -0.46
CDH1-213ENST00000612417 SELENOVP59797 346 aa12.15□□□□□ -0.46
CDH1-213ENST00000612417 REC114Q7Z4M0 266 aa12.15□□□□□ -0.46
CDH1-213ENST00000612417 OR52E5Q8NH55 327 aa12.15□□□□□ -0.46
CDH1-213ENST00000612417 PPP1R35Q8TAP8 253 aa12.15□□□□□ -0.46
CDH1-213ENST00000612417 ABHD5Q8WTS1 349 aa12.15□□□□□ -0.46
CDH1-213ENST00000612417 SNX22Q96L94 193 aa12.15□□□□□ -0.46
CDH1-213ENST00000612417 PYGO2Q9BRQ0 406 aa12.15□□□□□ -0.46
CDH1-213ENST00000612417 C2orf88Q9BSF0 95 aa12.15□□□□□ -0.46
CDH1-213ENST00000612417 QTRT1Q9BXR0 403 aaKnown RBP12.15□□□□□ -0.46
CDH1-213ENST00000612417 GPR61Q9BZJ8 451 aa12.15□□□□□ -0.46
CDH1-213ENST00000612417 OR6C3Q9NZP0 311 aa12.15□□□□□ -0.46
CDH1-213ENST00000612417 WDR83OSQ9Y284 106 aa12.15□□□□□ -0.46
CDH1-213ENST00000612417 ADGRG4Q8IZF6 3080 aa12.15□□□□□ -0.46
CDH1-213ENST00000612417 F2RL2O00254 374 aa12.14□□□□□ -0.47
CDH1-213ENST00000612417 OR9G9P0C7N8 305 aa12.14□□□□□ -0.47
CDH1-213ENST00000612417 EDDM3AQ14507 147 aa12.14□□□□□ -0.47
CDH1-213ENST00000612417 ACOT6Q3I5F7 207 aaPredicted RBP12.14□□□□□ -0.47
CDH1-213ENST00000612417 FRZBQ92765 325 aa12.14□□□□□ -0.47
CDH1-213ENST00000612417 PARLQ9H300 379 aa12.14□□□□□ -0.47
CDH1-213ENST00000612417 TET2Q6N021 2002 aaPredicted RBP12.14□□□□□ -0.47
CDH1-213ENST00000612417 SMCO3A2RU48 225 aa12.14□□□□□ -0.47
CDH1-213ENST00000612417 TMEM8BA6NDV4 472 aa12.14□□□□□ -0.47
CDH1-213ENST00000612417 FAM90A27PA6NNH2 459 aa12.14□□□□□ -0.47
CDH1-213ENST00000612417 PPP1R2P9O14990 202 aa12.14□□□□□ -0.47
CDH1-213ENST00000612417 IGHV3-13P01766 116 aa12.14□□□□□ -0.47
CDH1-213ENST00000612417 THBDP07204 575 aa12.14□□□□□ -0.47
CDH1-213ENST00000612417 PFN1P07737 140 aaKnown RBP12.14□□□□□ -0.47
CDH1-213ENST00000612417 TRGC1P0CF51 173 aa12.14□□□□□ -0.47
CDH1-213ENST00000612417 RPL23P62829 140 aaKnown RBP12.14□□□□□ -0.47
CDH1-213ENST00000612417 HNF4GQ14541 408 aa12.14□□□□□ -0.47
CDH1-213ENST00000612417 ADIRFQ15847 76 aa12.14□□□□□ -0.47
CDH1-213ENST00000612417 BSXQ3C1V8 233 aa12.14□□□□□ -0.47
CDH1-213ENST00000612417 HIST3H2BBQ8N257 126 aa12.14□□□□□ -0.47
CDH1-213ENST00000612417 RAB1CQ92928 201 aa12.14□□□□□ -0.47
CDH1-213ENST00000612417 GNG12Q9UBI6 72 aa12.14□□□□□ -0.47
CDH1-213ENST00000612417 TANC2Q9HCD6 1990 aa12.13□□□□□ -0.47
CDH1-213ENST00000612417 ROS1P08922 2347 aa12.13□□□□□ -0.47
CDH1-213ENST00000612417 PKD1L2Q7Z442 2459 aa12.13□□□□□ -0.47
CDH1-213ENST00000612417 TCAPO15273 167 aa12.13□□□□□ -0.47
CDH1-213ENST00000612417 HMGB3O15347 200 aaKnown RBP12.13□□□□□ -0.47
CDH1-213ENST00000612417 MPDU1O75352 247 aa12.13□□□□□ -0.47
CDH1-213ENST00000612417 NDUFB7P17568 137 aa12.13□□□□□ -0.47
CDH1-213ENST00000612417 LOXL3P58215 753 aa12.13□□□□□ -0.47
CDH1-213ENST00000612417 RPP30P78346 268 aaKnown RBP12.13□□□□□ -0.47
CDH1-213ENST00000612417 BSPH1Q075Z2 132 aa12.13□□□□□ -0.47
CDH1-213ENST00000612417 PYY3Q5JQD4 70 aa12.13□□□□□ -0.47
CDH1-213ENST00000612417 GCSAMQ8N6F7 178 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms