RNA–Protein interactions for RNA: ENST00000611950.1

PCDHGC3-202, Transcript of protocadherin gamma subfamily C, 3, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGC3, Length 2,849 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-202ENST00000611950 RND3P61587 244 aa9.03□□□□□ -0.96
PCDHGC3-202ENST00000611950 RSG1Q9BU20 258 aa9.03□□□□□ -0.96
PCDHGC3-202ENST00000611950 LYRM2Q9NU23 88 aaPredicted RBP9.03□□□□□ -0.96
PCDHGC3-202ENST00000611950 TNFRSF13BO14836 293 aaPredicted RBP9.03□□□□□ -0.96
PCDHGC3-202ENST00000611950 PAFAH1B2P68402 229 aa9.03□□□□□ -0.96
PCDHGC3-202ENST00000611950 IL13RA2Q14627 380 aa9.03□□□□□ -0.96
PCDHGC3-202ENST00000611950 CEACAM21Q3KPI0 293 aa9.03□□□□□ -0.96
PCDHGC3-202ENST00000611950 FER1L6-AS1Q8NA97 138 aa9.03□□□□□ -0.96
PCDHGC3-202ENST00000611950 LYPD6BQ8NI32 183 aa9.03□□□□□ -0.96
PCDHGC3-202ENST00000611950 CT55Q8WUE5 264 aa9.03□□□□□ -0.96
PCDHGC3-202ENST00000611950 COL27A1Q8IZC6 1860 aaPredicted RBP9.03□□□□□ -0.96
PCDHGC3-202ENST00000611950 SPTA1P02549 2419 aa9.02□□□□□ -0.96
PCDHGC3-202ENST00000611950 CADP27708 2225 aa9.02□□□□□ -0.96
PCDHGC3-202ENST00000611950 RBFOX3A6NFN3 312 aa9.02□□□□□ -0.97
PCDHGC3-202ENST00000611950 ZNF705FA8MVS1 300 aaPredicted RBP9.02□□□□□ -0.97
PCDHGC3-202ENST00000611950 H3BQ15 152 aa9.02□□□□□ -0.97
PCDHGC3-202ENST00000611950 ZNF705DP0CH99 300 aaPredicted RBP9.02□□□□□ -0.97
PCDHGC3-202ENST00000611950 ZNF705BP0CI00 300 aaPredicted RBP9.02□□□□□ -0.97
PCDHGC3-202ENST00000611950 TAS2R30P59541 319 aa9.02□□□□□ -0.97
PCDHGC3-202ENST00000611950 PLP1P60201 277 aa9.02□□□□□ -0.97
PCDHGC3-202ENST00000611950 SRSF6Q13247 344 aaKnown RBP9.02□□□□□ -0.97
PCDHGC3-202ENST00000611950 P2RY6Q15077 328 aa9.02□□□□□ -0.97
PCDHGC3-202ENST00000611950 FAM53AQ6NSI3 398 aaPredicted RBP9.02□□□□□ -0.97
PCDHGC3-202ENST00000611950 FAM71F2Q6NXP2 309 aa9.02□□□□□ -0.97
PCDHGC3-202ENST00000611950 LCN15Q6UWW0 184 aa9.02□□□□□ -0.97
PCDHGC3-202ENST00000611950 PSMF1Q92530 271 aa9.02□□□□□ -0.97
PCDHGC3-202ENST00000611950 RAB39BQ96DA2 213 aa9.02□□□□□ -0.97
PCDHGC3-202ENST00000611950 PBDC1Q9BVG4 233 aa9.02□□□□□ -0.97
PCDHGC3-202ENST00000611950 PRORYQ9H606 182 aa9.02□□□□□ -0.97
PCDHGC3-202ENST00000611950 GNG13Q9P2W3 67 aa9.02□□□□□ -0.97
PCDHGC3-202ENST00000611950 HECTD1Q9ULT8 2610 aa9.02□□□□□ -0.97
PCDHGC3-202ENST00000611950 SYNGR4O95473 234 aa9.02□□□□□ -0.97
PCDHGC3-202ENST00000611950 CDS2O95674 445 aa9.02□□□□□ -0.97
PCDHGC3-202ENST00000611950 PSG2P11465 335 aa9.02□□□□□ -0.97
PCDHGC3-202ENST00000611950 PLA2G2AP14555 144 aa9.02□□□□□ -0.97
PCDHGC3-202ENST00000611950 MPV17LQ2QL34 196 aa9.02□□□□□ -0.97
PCDHGC3-202ENST00000611950 MOGAT3Q86VF5 341 aa9.02□□□□□ -0.97
PCDHGC3-202ENST00000611950 ODF3L1Q8IXM7 274 aa9.02□□□□□ -0.97
PCDHGC3-202ENST00000611950 SIGLEC12Q96PQ1 595 aa9.02□□□□□ -0.97
PCDHGC3-202ENST00000611950 VSIRQ9H7M9 311 aa9.02□□□□□ -0.97
PCDHGC3-202ENST00000611950 OR1A1Q9P1Q5 309 aa9.02□□□□□ -0.97
PCDHGC3-202ENST00000611950 ERRFI1Q9UJM3 462 aaPredicted RBP9.02□□□□□ -0.97
PCDHGC3-202ENST00000611950 ROS1P08922 2347 aa9.02□□□□□ -0.97
PCDHGC3-202ENST00000611950 PPOXP50336 477 aa9.01□□□□□ -0.97
PCDHGC3-202ENST00000611950 GFRA1P56159 465 aa9.01□□□□□ -0.97
PCDHGC3-202ENST00000611950 OR8B8Q15620 311 aa9.01□□□□□ -0.97
PCDHGC3-202ENST00000611950 LTC4SQ16873 150 aa9.01□□□□□ -0.97
PCDHGC3-202ENST00000611950 CLEC12BQ2HXU8 276 aa9.01□□□□□ -0.97
PCDHGC3-202ENST00000611950 DCAF12Q5T6F0 453 aa9.01□□□□□ -0.97
PCDHGC3-202ENST00000611950 SPSB3Q6PJ21 355 aa9.01□□□□□ -0.97
PCDHGC3-202ENST00000611950 ZNF843Q8N446 348 aa9.01□□□□□ -0.97
PCDHGC3-202ENST00000611950 LOXL2Q9Y4K0 774 aa9.01□□□□□ -0.97
PCDHGC3-202ENST00000611950 TOX4O94842 621 aa9.01□□□□□ -0.97
PCDHGC3-202ENST00000611950 TFF1P04155 84 aa9.01□□□□□ -0.97
PCDHGC3-202ENST00000611950 MAGEA5P43359 124 aa9.01□□□□□ -0.97
PCDHGC3-202ENST00000611950 GPR6P46095 362 aaPredicted RBP9.01□□□□□ -0.97
PCDHGC3-202ENST00000611950 IL22RA1Q8N6P7 574 aa9.01□□□□□ -0.97
PCDHGC3-202ENST00000611950 APH1AQ96BI3 265 aa9.01□□□□□ -0.97
PCDHGC3-202ENST00000611950 ZNF391Q9UJN7 358 aa9.01□□□□□ -0.97
PCDHGC3-202ENST00000611950 KCNS2Q9ULS6 477 aa9.01□□□□□ -0.97
PCDHGC3-202ENST00000611950 CA6P23280 308 aa9□□□□□ -0.97
PCDHGC3-202ENST00000611950 RPL23AP62750 156 aaKnown RBP9□□□□□ -0.97
PCDHGC3-202ENST00000611950 PMS2P11Q13670 270 aa9□□□□□ -0.97
PCDHGC3-202ENST00000611950 ZNF266Q14584 549 aa9□□□□□ -0.97
PCDHGC3-202ENST00000611950 TMEM211Q6ICI0 200 aa9□□□□□ -0.97
PCDHGC3-202ENST00000611950 TEX43Q6ZNM6 134 aa9□□□□□ -0.97
PCDHGC3-202ENST00000611950 Q9N2K0 584 aa9□□□□□ -0.97
PCDHGC3-202ENST00000611950 TMEM160Q9NX00 188 aa9□□□□□ -0.97
PCDHGC3-202ENST00000611950 SIRPB1O00241 398 aa9□□□□□ -0.97
PCDHGC3-202ENST00000611950 SERPINA7P05543 415 aa9□□□□□ -0.97
PCDHGC3-202ENST00000611950 Q6ZRM9 215 aa9□□□□□ -0.97
PCDHGC3-202ENST00000611950 ZNF429Q86V71 674 aa9□□□□□ -0.97
PCDHGC3-202ENST00000611950 ZDHHC23Q8IYP9 409 aa9□□□□□ -0.97
PCDHGC3-202ENST00000611950 LRTM2Q8N967 370 aa9□□□□□ -0.97
PCDHGC3-202ENST00000611950 C5orf17Q8NAS9 161 aa9□□□□□ -0.97
PCDHGC3-202ENST00000611950 ZDHHC16Q969W1 377 aa9□□□□□ -0.97
PCDHGC3-202ENST00000611950 ZNF665Q9H7R5 613 aa9□□□□□ -0.97
PCDHGC3-202ENST00000611950 PLEKHF2Q9H8W4 249 aa9□□□□□ -0.97
PCDHGC3-202ENST00000611950 BET1LQ9NYM9 111 aa9□□□□□ -0.97
PCDHGC3-202ENST00000611950 DEFA4P12838 97 aa8.99□□□□□ -0.97
PCDHGC3-202ENST00000611950 TNFRSF1AP19438 455 aa8.99□□□□□ -0.97
PCDHGC3-202ENST00000611950 PCBD1P61457 104 aa8.99□□□□□ -0.97
PCDHGC3-202ENST00000611950 RTP5Q14D33 572 aa8.99□□□□□ -0.97
PCDHGC3-202ENST00000611950 TMEM183BQ1AE95 376 aa8.99□□□□□ -0.97
PCDHGC3-202ENST00000611950 NHLRC2Q8NBF2 726 aa8.99□□□□□ -0.97
PCDHGC3-202ENST00000611950 TAAR3PQ9P1P4 343 aa8.99□□□□□ -0.97
PCDHGC3-202ENST00000611950 WSB1Q9Y6I7 421 aa8.99□□□□□ -0.97
PCDHGC3-202ENST00000611950 A0A087WWC5 75 aa8.99□□□□□ -0.97
PCDHGC3-202ENST00000611950 S1PR2O95136 353 aa8.99□□□□□ -0.97
PCDHGC3-202ENST00000611950 SERPINE2P07093 398 aa8.99□□□□□ -0.97
PCDHGC3-202ENST00000611950 ACP1P24666 158 aa8.99□□□□□ -0.97
PCDHGC3-202ENST00000611950 PNPLA5Q7Z6Z6 429 aaPredicted RBP8.99□□□□□ -0.97
PCDHGC3-202ENST00000611950 CXorf67Q86X51 503 aaPredicted RBP8.99□□□□□ -0.97
PCDHGC3-202ENST00000611950 SPACA3Q8IXA5 215 aa8.99□□□□□ -0.97
PCDHGC3-202ENST00000611950 MKXQ8IYA7 352 aa8.99□□□□□ -0.97
PCDHGC3-202ENST00000611950 SAXO1Q8IYX7 474 aa8.99□□□□□ -0.97
PCDHGC3-202ENST00000611950 SNIP1Q8TAD8 396 aaKnown RBP8.99□□□□□ -0.97
PCDHGC3-202ENST00000611950 CHRDL1Q9BU40 450 aa8.99□□□□□ -0.97
PCDHGC3-202ENST00000611950 IL36GQ9NZH8 169 aa8.99□□□□□ -0.97
PCDHGC3-202ENST00000611950 CACNG5Q9UF02 275 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms