RNA–Protein interactions for RNA: ENST00000611869.4

TCF3-220, Transcript of transcription factor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TCF3, Length 4,409 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-220ENST00000611869 ZNF525Q8N782 197 aa11.01□□□□□ -0.65
TCF3-220ENST00000611869 SIGLECL1Q8N7X8 197 aa11.01□□□□□ -0.65
TCF3-220ENST00000611869 OR4F17Q8NGA8 305 aa11.01□□□□□ -0.65
TCF3-220ENST00000611869 RNF138Q8WVD3 245 aa11.01□□□□□ -0.65
TCF3-220ENST00000611869 ANAPC16Q96DE5 110 aa11.01□□□□□ -0.65
TCF3-220ENST00000611869 PSMG3Q9BT73 122 aaPredicted RBP11.01□□□□□ -0.65
TCF3-220ENST00000611869 ELOVL5Q9NYP7 299 aa11.01□□□□□ -0.65
TCF3-220ENST00000611869 WASHC3Q9Y3C0 194 aa11.01□□□□□ -0.65
TCF3-220ENST00000611869 GATCO43716 136 aaKnown RBP11.01□□□□□ -0.65
TCF3-220ENST00000611869 TRGC2P03986 189 aa11.01□□□□□ -0.65
TCF3-220ENST00000611869 REG1AP05451 166 aa11.01□□□□□ -0.65
TCF3-220ENST00000611869 LINC00869P0C866 280 aa11.01□□□□□ -0.65
TCF3-220ENST00000611869 CCL3L1P16619 93 aa11.01□□□□□ -0.65
TCF3-220ENST00000611869 GPR6P46095 362 aaPredicted RBP11.01□□□□□ -0.65
TCF3-220ENST00000611869 ARF6P62330 175 aa11.01□□□□□ -0.65
TCF3-220ENST00000611869 LRRC75BQ2VPJ9 315 aa11.01□□□□□ -0.65
TCF3-220ENST00000611869 ALPK3Q96L96 1907 aa11.01□□□□□ -0.65
TCF3-220ENST00000611869 CAMPP49913 170 aa11.01□□□□□ -0.65
TCF3-220ENST00000611869 GAMTQ14353 236 aa11.01□□□□□ -0.65
TCF3-220ENST00000611869 WDR25Q64LD2 544 aaPredicted RBP11.01□□□□□ -0.65
TCF3-220ENST00000611869 CYYR1Q96J86 154 aa11.01□□□□□ -0.65
TCF3-220ENST00000611869 HTTP42858 3142 aa11□□□□□ -0.65
TCF3-220ENST00000611869 SPG11Q96JI7 2443 aa11□□□□□ -0.65
TCF3-220ENST00000611869 GNG7O60262 68 aa11□□□□□ -0.65
TCF3-220ENST00000611869 PMS2P11Q13670 270 aa11□□□□□ -0.65
TCF3-220ENST00000611869 ZNF343Q6P1L6 599 aa11□□□□□ -0.65
TCF3-220ENST00000611869 SGMS2Q8NHU3 365 aa11□□□□□ -0.65
TCF3-220ENST00000611869 BARX1Q9HBU1 254 aaPredicted RBP11□□□□□ -0.65
TCF3-220ENST00000611869 C17orf100A8MU93 164 aa11□□□□□ -0.65
TCF3-220ENST00000611869 DNASE2O00115 360 aaPredicted RBP11□□□□□ -0.65
TCF3-220ENST00000611869 MC5RP33032 325 aa11□□□□□ -0.65
TCF3-220ENST00000611869 RANP62826 216 aaKnown RBP11□□□□□ -0.65
TCF3-220ENST00000611869 HERPUD1Q15011 391 aa11□□□□□ -0.65
TCF3-220ENST00000611869 ZNF596Q8TC21 504 aa11□□□□□ -0.65
TCF3-220ENST00000611869 HIST1H2BAQ96A08 127 aa11□□□□□ -0.65
TCF3-220ENST00000611869 CHRDL1Q9BU40 450 aa11□□□□□ -0.65
TCF3-220ENST00000611869 REG4Q9BYZ8 158 aa11□□□□□ -0.65
TCF3-220ENST00000611869 CRIM1Q9NZV1 1036 aa11□□□□□ -0.65
TCF3-220ENST00000611869 SEC14L6B5MCN3 397 aa11□□□□□ -0.65
TCF3-220ENST00000611869 ARL14EPLP0DKL9 152 aa11□□□□□ -0.65
TCF3-220ENST00000611869 PMCHP20382 165 aa11□□□□□ -0.65
TCF3-220ENST00000611869 DHRS7BQ6IAN0 325 aaPredicted RBP11□□□□□ -0.65
TCF3-220ENST00000611869 OR9G1Q8NH87 305 aa11□□□□□ -0.65
TCF3-220ENST00000611869 TMUB1Q9BVT8 246 aa11□□□□□ -0.65
TCF3-220ENST00000611869 NPCDR1Q9BY65 106 aa11□□□□□ -0.65
TCF3-220ENST00000611869 LIME1Q9H400 295 aa11□□□□□ -0.65
TCF3-220ENST00000611869 THYN1Q9P016 225 aa11□□□□□ -0.65
TCF3-220ENST00000611869 TGIF2-C20orf24A0A0A6YYL0 155 aa11□□□□□ -0.65
TCF3-220ENST00000611869 PPIAL4CA0A0B4J2A2 164 aa11□□□□□ -0.65
TCF3-220ENST00000611869 MLNRO43193 412 aa11□□□□□ -0.65
TCF3-220ENST00000611869 IGHG3P01860 377 aa11□□□□□ -0.65
TCF3-220ENST00000611869 PPIAL4GP0DN37 164 aa11□□□□□ -0.65
TCF3-220ENST00000611869 RND2P52198 227 aa11□□□□□ -0.65
TCF3-220ENST00000611869 KRTDAPP60985 99 aa11□□□□□ -0.65
TCF3-220ENST00000611869 CCL20P78556 96 aa11□□□□□ -0.65
TCF3-220ENST00000611869 PRB3Q04118 309 aaPredicted RBP11□□□□□ -0.65
TCF3-220ENST00000611869 RNF2Q99496 336 aa11□□□□□ -0.65
TCF3-220ENST00000611869 RASL11BQ9BPW5 248 aa11□□□□□ -0.65
TCF3-220ENST00000611869 ZNF586Q9NXT0 402 aa11□□□□□ -0.65
TCF3-220ENST00000611869 SERTM2A0A1B0GWG4 89 aa10.99□□□□□ -0.65
TCF3-220ENST00000611869 ZNF785A8K8V0 405 aa10.99□□□□□ -0.65
TCF3-220ENST00000611869 NDUFA2O43678 99 aa10.99□□□□□ -0.65
TCF3-220ENST00000611869 CA2P00918 260 aa10.99□□□□□ -0.65
TCF3-220ENST00000611869 FAM3BP58499 235 aaPredicted RBP10.99□□□□□ -0.65
TCF3-220ENST00000611869 OR4A47Q6IF82 309 aa10.99□□□□□ -0.65
TCF3-220ENST00000611869 AAMDCQ9H7C9 122 aa10.99□□□□□ -0.65
TCF3-220ENST00000611869 ZNF98A6NK75 572 aa10.99□□□□□ -0.65
TCF3-220ENST00000611869 HSBP1O75506 76 aa10.99□□□□□ -0.65
TCF3-220ENST00000611869 SRSF4Q08170 494 aaKnown RBP10.99□□□□□ -0.65
TCF3-220ENST00000611869 OR5I1Q13606 314 aa10.99□□□□□ -0.65
TCF3-220ENST00000611869 RPEL1Q2QD12 228 aa10.99□□□□□ -0.65
TCF3-220ENST00000611869 MORN2Q502X0 79 aa10.99□□□□□ -0.65
TCF3-220ENST00000611869 OR4C13Q8NGP0 309 aa10.99□□□□□ -0.65
TCF3-220ENST00000611869 PARLQ9H300 379 aa10.99□□□□□ -0.65
TCF3-220ENST00000611869 METTL1Q9UBP6 276 aaKnown RBP10.99□□□□□ -0.65
TCF3-220ENST00000611869 LOC102723971A0A1B0GUV8 181 aa10.99□□□□□ -0.65
TCF3-220ENST00000611869 SRRM5B3KS81 715 aa10.99□□□□□ -0.65
TCF3-220ENST00000611869 ERVFRD-1P60508 538 aa10.99□□□□□ -0.65
TCF3-220ENST00000611869 HOXA4Q00056 320 aaPredicted RBP10.99□□□□□ -0.65
TCF3-220ENST00000611869 ZNF506Q5JVG8 444 aa10.99□□□□□ -0.65
TCF3-220ENST00000611869 MRPL54Q6P161 138 aaKnown RBP10.99□□□□□ -0.65
TCF3-220ENST00000611869 Q6P435 159 aa10.99□□□□□ -0.65
TCF3-220ENST00000611869 SMIM15Q7Z3B0 74 aa10.99□□□□□ -0.65
TCF3-220ENST00000611869 SPACA3Q8IXA5 215 aa10.99□□□□□ -0.65
TCF3-220ENST00000611869 SLC25A15Q9Y619 301 aa10.99□□□□□ -0.65
TCF3-220ENST00000611869 DENND4AQ7Z401 1863 aa10.98□□□□□ -0.65
TCF3-220ENST00000611869 PCSK4Q6UW60 755 aa10.98□□□□□ -0.65
TCF3-220ENST00000611869 P2RX4Q99571 388 aa10.98□□□□□ -0.65
TCF3-220ENST00000611869 COA4Q9NYJ1 87 aa10.98□□□□□ -0.65
TCF3-220ENST00000611869 SRP19P09132 144 aaKnown RBP10.98□□□□□ -0.65
TCF3-220ENST00000611869 APOBEC3AP31941 199 aaPredicted RBP10.98□□□□□ -0.65
TCF3-220ENST00000611869 LINC00205P59089 165 aa10.98□□□□□ -0.65
TCF3-220ENST00000611869 RPL30P62888 115 aaKnown RBP10.98□□□□□ -0.65
TCF3-220ENST00000611869 SLC35B1P78383 322 aa10.98□□□□□ -0.65
TCF3-220ENST00000611869 NMSQ5H8A3 153 aa10.98□□□□□ -0.65
TCF3-220ENST00000611869 MUC22E2RYF6 1773 aaPredicted RBP10.98□□□□□ -0.65
TCF3-220ENST00000611869 B9A039 149 aa10.98□□□□□ -0.65
TCF3-220ENST00000611869 MMD2Q8IY49 270 aa10.98□□□□□ -0.65
TCF3-220ENST00000611869 PRO1933Q9H354 126 aa10.98□□□□□ -0.65
TCF3-220ENST00000611869 IGKV1-6A0A0C4DH72 117 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms