RNA–Protein interactions for RNA: ENST00000611614.4

COPS7B-223, Transcript of COP9 signalosome subunit 7B, human

TSL 3 BASIC

Gene COPS7B, Length 2,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
COPS7B-223	ENST00000611614	IL19	Q9UHD0	177 aa		11.51	□□□□□ -0.57
COPS7B-223	ENST00000611614	KIAA2026	Q5HYC2	2103 aa		11.51	□□□□□ -0.57
COPS7B-223	ENST00000611614	PLCE1	Q9P212	2302 aa		11.5	□□□□□ -0.57
COPS7B-223	ENST00000611614	ZG16	O60844	167 aa		11.5	□□□□□ -0.57
COPS7B-223	ENST00000611614	PAX5	Q02548	391 aa		11.5	□□□□□ -0.57
COPS7B-223	ENST00000611614	ZNF816	Q0VGE8	651 aa	Predicted RBP	11.5	□□□□□ -0.57
COPS7B-223	ENST00000611614	TMEM241	Q24JQ0	296 aa		11.5	□□□□□ -0.57
COPS7B-223	ENST00000611614	CD177	Q8N6Q3	437 aa		11.5	□□□□□ -0.57
COPS7B-223	ENST00000611614	OR4X1	Q8NH49	305 aa		11.5	□□□□□ -0.57
COPS7B-223	ENST00000611614	ACY3	Q96HD9	319 aa		11.5	□□□□□ -0.57
COPS7B-223	ENST00000611614	SNX22	Q96L94	193 aa		11.5	□□□□□ -0.57
COPS7B-223	ENST00000611614	ACTR3C	Q9C0K3	210 aa	Predicted RBP	11.5	□□□□□ -0.57
COPS7B-223	ENST00000611614	SLC31A2	O15432	143 aa		11.5	□□□□□ -0.57
COPS7B-223	ENST00000611614	KBTBD11	O94819	623 aa		11.5	□□□□□ -0.57
COPS7B-223	ENST00000611614	KRAS	P01116	189 aa		11.5	□□□□□ -0.57
COPS7B-223	ENST00000611614	PFN1	P07737	140 aa	Known RBP	11.5	□□□□□ -0.57
COPS7B-223	ENST00000611614	PRDX2	P32119	198 aa		11.5	□□□□□ -0.57
COPS7B-223	ENST00000611614	SSTR5	P35346	364 aa		11.5	□□□□□ -0.57
COPS7B-223	ENST00000611614	G6PC	P35575	357 aa		11.5	□□□□□ -0.57
COPS7B-223	ENST00000611614	CDSN	Q15517	529 aa		11.5	□□□□□ -0.57
COPS7B-223	ENST00000611614	TMEM14EP	Q6UXP3	125 aa		11.5	□□□□□ -0.57
COPS7B-223	ENST00000611614	TPRX1	Q8N7U7	411 aa		11.5	□□□□□ -0.57
COPS7B-223	ENST00000611614	OR1P1	Q8NH06	330 aa		11.5	□□□□□ -0.57
COPS7B-223	ENST00000611614	RHOV	Q96L33	236 aa		11.5	□□□□□ -0.57
COPS7B-223	ENST00000611614	OR5B12	Q96R08	314 aa		11.5	□□□□□ -0.57
COPS7B-223	ENST00000611614	SMIM7	Q9BQ49	75 aa		11.5	□□□□□ -0.57
COPS7B-223	ENST00000611614	C17orf98	A8MV24	154 aa		11.49	□□□□□ -0.57
COPS7B-223	ENST00000611614	SHISA9	B4DS77	424 aa		11.49	□□□□□ -0.57
COPS7B-223	ENST00000611614	SPINT2	O43291	252 aa		11.49	□□□□□ -0.57
COPS7B-223	ENST00000611614	ZNF737	O75373	536 aa		11.49	□□□□□ -0.57
COPS7B-223	ENST00000611614	TNFRSF1A	P19438	455 aa		11.49	□□□□□ -0.57
COPS7B-223	ENST00000611614	BRWD1-AS2	P59051	145 aa		11.49	□□□□□ -0.57
COPS7B-223	ENST00000611614	ZNF66	Q6ZN08	573 aa		11.49	□□□□□ -0.57
COPS7B-223	ENST00000611614	ITLN1	Q8WWA0	313 aa		11.49	□□□□□ -0.57
COPS7B-223	ENST00000611614	VSIR	Q9H7M9	311 aa		11.49	□□□□□ -0.57
COPS7B-223	ENST00000611614	CTNNBIP1	Q9NSA3	81 aa	Predicted RBP	11.49	□□□□□ -0.57
COPS7B-223	ENST00000611614	SLC39A9	Q9NUM3	307 aa		11.49	□□□□□ -0.57
COPS7B-223	ENST00000611614	ICE1	Q9Y2F5	2266 aa		11.49	□□□□□ -0.57
COPS7B-223	ENST00000611614	S1PR2	O95136	353 aa		11.49	□□□□□ -0.57
COPS7B-223	ENST00000611614	CLDN1	O95832	211 aa		11.49	□□□□□ -0.57
COPS7B-223	ENST00000611614	GCG	P01275	180 aa		11.49	□□□□□ -0.57
COPS7B-223	ENST00000611614	IGHV1-46	P01743	117 aa		11.49	□□□□□ -0.57
COPS7B-223	ENST00000611614	MB	P02144	154 aa		11.49	□□□□□ -0.57
COPS7B-223	ENST00000611614	APOBEC3A	P31941	199 aa	Predicted RBP	11.49	□□□□□ -0.57
COPS7B-223	ENST00000611614	TAS2R60	P59551	318 aa		11.49	□□□□□ -0.57
COPS7B-223	ENST00000611614	HTD2	P86397	168 aa		11.49	□□□□□ -0.57
COPS7B-223	ENST00000611614	SLC38A11	Q08AI6	406 aa		11.49	□□□□□ -0.57
COPS7B-223	ENST00000611614	ATP6V1F	Q16864	119 aa		11.49	□□□□□ -0.57
COPS7B-223	ENST00000611614	C21orf62-AS1	Q17RA5	79 aa		11.49	□□□□□ -0.57
COPS7B-223	ENST00000611614		Q3ZCU0	254 aa		11.49	□□□□□ -0.57
COPS7B-223	ENST00000611614	BTNL3	Q6UXE8	466 aa		11.49	□□□□□ -0.57
COPS7B-223	ENST00000611614	MOGAT3	Q86VF5	341 aa		11.49	□□□□□ -0.57
COPS7B-223	ENST00000611614	TAF15	Q92804	592 aa	Known RBP eCLIP	11.49	□□□□□ -0.57
COPS7B-223	ENST00000611614	OR4C12	Q96R67	309 aa		11.49	□□□□□ -0.57
COPS7B-223	ENST00000611614	C2orf88	Q9BSF0	95 aa		11.49	□□□□□ -0.57
COPS7B-223	ENST00000611614	DYNLRB1	Q9NP97	96 aa		11.49	□□□□□ -0.57
COPS7B-223	ENST00000611614	IGHV3-43	A0A0B4J1X8	118 aa		11.48	□□□□□ -0.57
COPS7B-223	ENST00000611614	ODAM	A1E959	279 aa		11.48	□□□□□ -0.57
COPS7B-223	ENST00000611614	LRRC30	A6NM36	301 aa		11.48	□□□□□ -0.57
COPS7B-223	ENST00000611614	SRRM5	B3KS81	715 aa		11.48	□□□□□ -0.57
COPS7B-223	ENST00000611614	C15orf65	H3BRN8	121 aa		11.48	□□□□□ -0.57
COPS7B-223	ENST00000611614	RAB29	O14966	203 aa		11.48	□□□□□ -0.57
COPS7B-223	ENST00000611614	ADH4	P08319	380 aa		11.48	□□□□□ -0.57
COPS7B-223	ENST00000611614	IGHV3-43D	P0DP04	118 aa		11.48	□□□□□ -0.57
COPS7B-223	ENST00000611614	IRF2	P14316	349 aa		11.48	□□□□□ -0.57
COPS7B-223	ENST00000611614	EGR1	P18146	543 aa		11.48	□□□□□ -0.57
COPS7B-223	ENST00000611614	FGF8	P55075	233 aa	Predicted RBP	11.48	□□□□□ -0.57
COPS7B-223	ENST00000611614	MEF2B	Q02080	365 aa	Predicted RBP	11.48	□□□□□ -0.57
COPS7B-223	ENST00000611614	BSX	Q3C1V8	233 aa		11.48	□□□□□ -0.57
COPS7B-223	ENST00000611614	C16orf82	Q7Z2V1	217 aa		11.48	□□□□□ -0.57
COPS7B-223	ENST00000611614	FAM90A1	Q86YD7	464 aa		11.48	□□□□□ -0.57
COPS7B-223	ENST00000611614	RFESD	Q8TAC1	157 aa		11.48	□□□□□ -0.57
COPS7B-223	ENST00000611614	LHX4	Q969G2	390 aa		11.48	□□□□□ -0.57
COPS7B-223	ENST00000611614	RAB24	Q969Q5	203 aa		11.48	□□□□□ -0.57
COPS7B-223	ENST00000611614	MANBAL	Q9NQG1	85 aa		11.48	□□□□□ -0.57
COPS7B-223	ENST00000611614	C17orf100	A8MU93	164 aa		11.48	□□□□□ -0.57
COPS7B-223	ENST00000611614		E7EQL1	145 aa		11.48	□□□□□ -0.57
COPS7B-223	ENST00000611614		H7BYZ3	331 aa		11.48	□□□□□ -0.57
COPS7B-223	ENST00000611614	CFHR2	P36980	270 aa		11.48	□□□□□ -0.57
COPS7B-223	ENST00000611614	GATA4	P43694	442 aa		11.48	□□□□□ -0.57
COPS7B-223	ENST00000611614	PSMB3	P49720	205 aa		11.48	□□□□□ -0.57
COPS7B-223	ENST00000611614	FAM3B	P58499	235 aa	Predicted RBP	11.48	□□□□□ -0.57
COPS7B-223	ENST00000611614	ADIRF	Q15847	76 aa		11.48	□□□□□ -0.57
COPS7B-223	ENST00000611614	SSX7	Q7RTT5	188 aa		11.48	□□□□□ -0.57
COPS7B-223	ENST00000611614	ANAPC16	Q96DE5	110 aa		11.48	□□□□□ -0.57
COPS7B-223	ENST00000611614	HSD17B10	Q99714	261 aa	Known RBP	11.48	□□□□□ -0.57
COPS7B-223	ENST00000611614	SSX3	Q99909	188 aa		11.48	□□□□□ -0.57
COPS7B-223	ENST00000611614	MS4A5	Q9H3V2	200 aa		11.48	□□□□□ -0.57
COPS7B-223	ENST00000611614	PSG11	Q9UQ72	335 aa		11.48	□□□□□ -0.57
COPS7B-223	ENST00000611614	LAMP3	Q9UQV4	416 aa		11.48	□□□□□ -0.57
COPS7B-223	ENST00000611614	ANKHD1	Q8IWZ3	2542 aa	Known RBP	11.47	□□□□□ -0.57
COPS7B-223	ENST00000611614	PPP5D1	E7EU14	171 aa		11.47	□□□□□ -0.57
COPS7B-223	ENST00000611614	AMBP	P02760	352 aa		11.47	□□□□□ -0.57
COPS7B-223	ENST00000611614	PDLIM4	P50479	330 aa		11.47	□□□□□ -0.57
COPS7B-223	ENST00000611614	TFF3	Q07654	80 aa		11.47	□□□□□ -0.57
COPS7B-223	ENST00000611614	BEND2	Q8NDZ0	799 aa		11.47	□□□□□ -0.57
COPS7B-223	ENST00000611614	ITLN2	Q8WWU7	325 aa	Predicted RBP	11.47	□□□□□ -0.57
COPS7B-223	ENST00000611614	DCTN5	Q9BTE1	182 aa		11.47	□□□□□ -0.57
COPS7B-223	ENST00000611614	GAB2	Q9UQC2	676 aa		11.47	□□□□□ -0.57
COPS7B-223	ENST00000611614	IGKV1D-17	A0A075B6S4	117 aa		11.47	□□□□□ -0.57

Retrieved 100 of 20,778 RNA–protein pairs in 152.5 ms