RNA–Protein interactions for RNA: ENST00000607841.5

CTSA-219, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 571 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-219ENST00000607841 NDPQ00604 133 aa11.21□□□□□ -0.61
CTSA-219ENST00000607841 PJVKQ0ZLH3 352 aa11.21□□□□□ -0.61
CTSA-219ENST00000607841 TNXAQ16473 311 aa11.21□□□□□ -0.61
CTSA-219ENST00000607841 ZNF585BQ52M93 769 aa11.21□□□□□ -0.61
CTSA-219ENST00000607841 AKIRIN2Q53H80 203 aa11.21□□□□□ -0.61
CTSA-219ENST00000607841 OR4A47Q6IF82 309 aa11.21□□□□□ -0.61
CTSA-219ENST00000607841 SSX9Q7RTT3 188 aa11.21□□□□□ -0.61
CTSA-219ENST00000607841 GRPEL2Q8TAA5 225 aa11.21□□□□□ -0.61
CTSA-219ENST00000607841 R3HDM4Q96D70 268 aa11.21□□□□□ -0.61
CTSA-219ENST00000607841 TMEM68Q96MH6 324 aa11.21□□□□□ -0.61
CTSA-219ENST00000607841 C7orf50Q9BRJ6 194 aaKnown RBP11.21□□□□□ -0.61
CTSA-219ENST00000607841 RTBDNQ9BSG5 229 aaPredicted RBP11.21□□□□□ -0.61
CTSA-219ENST00000607841 WDR12Q9GZL7 423 aaKnown RBP11.21□□□□□ -0.61
CTSA-219ENST00000607841 C5orf66Q9H5L9 145 aa11.21□□□□□ -0.61
CTSA-219ENST00000607841 ZNF430Q9H8G1 570 aaPredicted RBP11.21□□□□□ -0.61
CTSA-219ENST00000607841 WSB1Q9Y6I7 421 aa11.21□□□□□ -0.61
CTSA-219ENST00000607841 TEX13DA0A0J9YY54 714 aaPredicted RBP11.2□□□□□ -0.62
CTSA-219ENST00000607841 MARCH11A6NNE9 402 aa11.2□□□□□ -0.62
CTSA-219ENST00000607841 G3V318 75 aa11.2□□□□□ -0.62
CTSA-219ENST00000607841 ARPC1BO15143 372 aaKnown RBP11.2□□□□□ -0.62
CTSA-219ENST00000607841 ATG12O94817 140 aa11.2□□□□□ -0.62
CTSA-219ENST00000607841 IGHG4P01861 327 aa11.2□□□□□ -0.62
CTSA-219ENST00000607841 ELANEP08246 267 aa11.2□□□□□ -0.62
CTSA-219ENST00000607841 CD83Q01151 205 aa11.2□□□□□ -0.62
CTSA-219ENST00000607841 CFHR3Q02985 330 aa11.2□□□□□ -0.62
CTSA-219ENST00000607841 FOXE3Q13461 319 aa11.2□□□□□ -0.62
CTSA-219ENST00000607841 ZNF846Q147U1 533 aa11.2□□□□□ -0.62
CTSA-219ENST00000607841 ECSCRQ19T08 205 aa11.2□□□□□ -0.62
CTSA-219ENST00000607841 C2orf68Q2NKX9 166 aa11.2□□□□□ -0.62
CTSA-219ENST00000607841 UNQ5815/PRO19632Q6UWF5 114 aa11.2□□□□□ -0.62
CTSA-219ENST00000607841 C10orf99Q6UWK7 81 aa11.2□□□□□ -0.62
CTSA-219ENST00000607841 NDUFA11Q86Y39 141 aa11.2□□□□□ -0.62
CTSA-219ENST00000607841 CADM3Q8N126 398 aa11.2□□□□□ -0.62
CTSA-219ENST00000607841 PHB2Q99623 299 aa11.2□□□□□ -0.62
CTSA-219ENST00000607841 CITED2Q99967 270 aaPredicted RBP11.2□□□□□ -0.62
CTSA-219ENST00000607841 ZFP57Q9NU63 452 aa11.2□□□□□ -0.62
CTSA-219ENST00000607841 TSSC4Q9Y5U2 329 aaPredicted RBP11.2□□□□□ -0.62
CTSA-219ENST00000607841 NUBP2Q9Y5Y2 271 aa11.2□□□□□ -0.62
CTSA-219ENST00000607841 ANK2Q01484 3957 aa11.2□□□□□ -0.62
CTSA-219ENST00000607841 KRASP01116 189 aa11.19□□□□□ -0.62
CTSA-219ENST00000607841 FGF2P09038 288 aa11.19□□□□□ -0.62
CTSA-219ENST00000607841 EGR2P11161 476 aaPredicted RBP11.19□□□□□ -0.62
CTSA-219ENST00000607841 PPIFP30405 207 aaKnown RBP11.19□□□□□ -0.62
CTSA-219ENST00000607841 RPL8P62917 257 aaKnown RBP11.19□□□□□ -0.62
CTSA-219ENST00000607841 MRGPRG-AS1Q2M3A8 158 aa11.19□□□□□ -0.62
CTSA-219ENST00000607841 CXorf66Q5JRM2 361 aaPredicted RBP11.19□□□□□ -0.62
CTSA-219ENST00000607841 TMEM65Q6PI78 240 aa11.19□□□□□ -0.62
CTSA-219ENST00000607841 SGPP2Q8IWX5 399 aa11.19□□□□□ -0.62
CTSA-219ENST00000607841 MINDY2Q8NBR6 621 aa11.19□□□□□ -0.62
CTSA-219ENST00000607841 LFNGQ8NES3 379 aa11.19□□□□□ -0.62
CTSA-219ENST00000607841 OR5M8Q8NGP6 311 aa11.19□□□□□ -0.62
CTSA-219ENST00000607841 SRSF12Q8WXF0 261 aaKnown RBP11.19□□□□□ -0.62
CTSA-219ENST00000607841 SPIN2AQ99865 258 aa11.19□□□□□ -0.62
CTSA-219ENST00000607841 SPIN2BQ9BPZ2 258 aa11.19□□□□□ -0.62
CTSA-219ENST00000607841 FAM103A1Q9BTL3 118 aaKnown RBP11.19□□□□□ -0.62
CTSA-219ENST00000607841 NAA60Q9H7X0 242 aa11.19□□□□□ -0.62
CTSA-219ENST00000607841 TMEM140Q9NV12 185 aa11.19□□□□□ -0.62
CTSA-219ENST00000607841 FOXA2Q9Y261 457 aaPredicted RBP11.19□□□□□ -0.62
CTSA-219ENST00000607841 KCNIP3Q9Y2W7 256 aa11.19□□□□□ -0.62
CTSA-219ENST00000607841 FBXO7Q9Y3I1 522 aa11.19□□□□□ -0.62
CTSA-219ENST00000607841 LINC00854A0A1B0GVQ3 168 aa11.18□□□□□ -0.62
CTSA-219ENST00000607841 A0A1W2PN81 502 aa11.18□□□□□ -0.62
CTSA-219ENST00000607841 MSGN1A6NI15 193 aa11.18□□□□□ -0.62
CTSA-219ENST00000607841 CRYM-AS1A6NIL9 109 aa11.18□□□□□ -0.62
CTSA-219ENST00000607841 UPK2O00526 184 aa11.18□□□□□ -0.62
CTSA-219ENST00000607841 SNAPC5O75971 98 aa11.18□□□□□ -0.62
CTSA-219ENST00000607841 HLA-GP17693 338 aa11.18□□□□□ -0.62
CTSA-219ENST00000607841 G6PCP35575 357 aa11.18□□□□□ -0.62
CTSA-219ENST00000607841 CHRNA7P36544 502 aa11.18□□□□□ -0.62
CTSA-219ENST00000607841 SSBP2P81877 361 aaPredicted RBP11.18□□□□□ -0.62
CTSA-219ENST00000607841 DHODHQ02127 395 aa11.18□□□□□ -0.62
CTSA-219ENST00000607841 RBMS2Q15434 407 aaKnown RBP11.18□□□□□ -0.62
CTSA-219ENST00000607841 TRIM16LQ309B1 348 aa11.18□□□□□ -0.62
CTSA-219ENST00000607841 TCTEX1D4Q5JR98 221 aa11.18□□□□□ -0.62
CTSA-219ENST00000607841 KHDC1LQ5JSQ8 128 aa11.18□□□□□ -0.62
CTSA-219ENST00000607841 TP53RKQ96S44 253 aa11.18□□□□□ -0.62
CTSA-219ENST00000607841 TSC22D3Q99576 134 aa11.18□□□□□ -0.62
CTSA-219ENST00000607841 VSIG4Q9Y279 399 aa11.18□□□□□ -0.62
CTSA-219ENST00000607841 IGLV1-40P01703 118 aa11.17□□□□□ -0.62
CTSA-219ENST00000607841 IL6RP08887 468 aaPredicted RBP11.17□□□□□ -0.62
CTSA-219ENST00000607841 ANXA3P12429 323 aa11.17□□□□□ -0.62
CTSA-219ENST00000607841 UCP1P25874 307 aa11.17□□□□□ -0.62
CTSA-219ENST00000607841 PSMB8P28062 276 aa11.17□□□□□ -0.62
CTSA-219ENST00000607841 RPL27AP46776 148 aaKnown RBP11.17□□□□□ -0.62
CTSA-219ENST00000607841 NSUN5P1Q3KNT7 163 aa11.17□□□□□ -0.62
CTSA-219ENST00000607841 SP6Q3SY56 376 aa11.17□□□□□ -0.62
CTSA-219ENST00000607841 C19orf54Q5BKX5 351 aa11.17□□□□□ -0.62
CTSA-219ENST00000607841 H2BFWTQ7Z2G1 175 aa11.17□□□□□ -0.62
CTSA-219ENST00000607841 RNF152Q8N8N0 203 aa11.17□□□□□ -0.62
CTSA-219ENST00000607841 COMMD5Q9GZQ3 224 aa11.17□□□□□ -0.62
CTSA-219ENST00000607841 FKBP11Q9NYL4 201 aa11.17□□□□□ -0.62
CTSA-219ENST00000607841 PIGBOS1A0A0B4J2F0 54 aa11.16□□□□□ -0.62
CTSA-219ENST00000607841 OR5AC1P0C628 307 aa11.16□□□□□ -0.62
CTSA-219ENST00000607841 PF4V1P10720 104 aa11.16□□□□□ -0.62
CTSA-219ENST00000607841 AKR1C4P17516 323 aa11.16□□□□□ -0.62
CTSA-219ENST00000607841 SLC6A1P30531 599 aa11.16□□□□□ -0.62
CTSA-219ENST00000607841 TMED4Q7Z7H5 227 aa11.16□□□□□ -0.62
CTSA-219ENST00000607841 SLC25A42Q86VD7 318 aa11.16□□□□□ -0.62
CTSA-219ENST00000607841 ADAD2Q8NCV1 583 aaKnown RBP11.16□□□□□ -0.62
CTSA-219ENST00000607841 OR4F17Q8NGA8 305 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms