RNA–Protein interactions for RNA: ENST00000606752.1

USP6NL-204, Transcript of USP6 N-terminal like, humanhuman

TSL 1 (best)

Gene USP6NL, Length 1,823 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-204ENST00000606752 SPANXN5Q5MJ07 72 aa17.45■□□□□ 0.38
USP6NL-204ENST00000606752 PUSL1Q8N0Z8 303 aaKnown RBP17.45■□□□□ 0.38
USP6NL-204ENST00000606752 ZDHHC16Q969W1 377 aa17.45■□□□□ 0.38
USP6NL-204ENST00000606752 ITGB1BP2Q9UKP3 347 aa17.45■□□□□ 0.38
USP6NL-204ENST00000606752 RPS10-NUDT3A0A1W2PQS6 291 aa17.44■□□□□ 0.38
USP6NL-204ENST00000606752 SAA1P0DJI8 122 aaPredicted RBP17.44■□□□□ 0.38
USP6NL-204ENST00000606752 CEACAM3P40198 252 aa17.44■□□□□ 0.38
USP6NL-204ENST00000606752 TPTE2P1Q5T6R2 138 aa17.44■□□□□ 0.38
USP6NL-204ENST00000606752 MOB3BQ86TA1 216 aa17.44■□□□□ 0.38
USP6NL-204ENST00000606752 TMEM217Q8N7C4 229 aa17.44■□□□□ 0.38
USP6NL-204ENST00000606752 OR5C1Q8NGR4 320 aa17.44■□□□□ 0.38
USP6NL-204ENST00000606752 MS4A7Q9GZW8 240 aaPredicted RBP17.44■□□□□ 0.38
USP6NL-204ENST00000606752 NUP50Q9UKX7 468 aa17.44■□□□□ 0.38
USP6NL-204ENST00000606752 PRNDQ9UKY0 176 aa17.44■□□□□ 0.38
USP6NL-204ENST00000606752 TACC2O95359 2948 aa17.44■□□□□ 0.38
USP6NL-204ENST00000606752 ATP6V1G1O75348 118 aa17.44■□□□□ 0.38
USP6NL-204ENST00000606752 TOX4O94842 621 aa17.44■□□□□ 0.38
USP6NL-204ENST00000606752 DYNLT3P51808 116 aa17.44■□□□□ 0.38
USP6NL-204ENST00000606752 DVL1P1P54792 670 aaPredicted RBP17.44■□□□□ 0.38
USP6NL-204ENST00000606752 LDLRAD2Q5SZI1 272 aa17.44■□□□□ 0.38
USP6NL-204ENST00000606752 IGHV3-72A0A0B4J1Y9 119 aa17.43■□□□□ 0.38
USP6NL-204ENST00000606752 RNASEK-C17orf49H0YIS7 233 aa17.43■□□□□ 0.38
USP6NL-204ENST00000606752 HOXB4P17483 251 aaPredicted RBP17.43■□□□□ 0.38
USP6NL-204ENST00000606752 LGALS7P47929 136 aa17.43■□□□□ 0.38
USP6NL-204ENST00000606752 KRTAP10-9P60411 292 aa17.43■□□□□ 0.38
USP6NL-204ENST00000606752 HSPE1P61604 102 aaKnown RBP17.43■□□□□ 0.38
USP6NL-204ENST00000606752 TMEM267Q0VDI3 215 aaPredicted RBP17.43■□□□□ 0.38
USP6NL-204ENST00000606752 CLINT1Q14677 625 aa17.43■□□□□ 0.38
USP6NL-204ENST00000606752 SPINK9Q5DT21 86 aa17.43■□□□□ 0.38
USP6NL-204ENST00000606752 OR1S2Q8NGQ3 325 aa17.43■□□□□ 0.38
USP6NL-204ENST00000606752 METTL15P1P0C7V9 234 aa17.42■□□□□ 0.38
USP6NL-204ENST00000606752 ZNF266Q14584 549 aa17.42■□□□□ 0.38
USP6NL-204ENST00000606752 EIF5AL1Q6IS14 154 aaKnown RBP17.42■□□□□ 0.38
USP6NL-204ENST00000606752 TMEM14EPQ6UXP3 125 aa17.42■□□□□ 0.38
USP6NL-204ENST00000606752 VSTM2AQ8TAG5 236 aa17.42■□□□□ 0.38
USP6NL-204ENST00000606752 PCNPQ8WW12 178 aaKnown RBP17.42■□□□□ 0.38
USP6NL-204ENST00000606752 ARV1Q9H2C2 271 aa17.42■□□□□ 0.38
USP6NL-204ENST00000606752 SLC25A32Q9H2D1 315 aa17.42■□□□□ 0.38
USP6NL-204ENST00000606752 FKBP11Q9NYL4 201 aa17.42■□□□□ 0.38
USP6NL-204ENST00000606752 TCF19Q9Y242 345 aa17.42■□□□□ 0.38
USP6NL-204ENST00000606752 STRAPQ9Y3F4 350 aaKnown RBP17.42■□□□□ 0.38
USP6NL-204ENST00000606752 KBTBD11O94819 623 aa17.42■□□□□ 0.38
USP6NL-204ENST00000606752 FAM74A1Q5RGS3 127 aa17.42■□□□□ 0.38
USP6NL-204ENST00000606752 PDZD9Q8IXQ8 264 aa17.42■□□□□ 0.38
USP6NL-204ENST00000606752 OR4A5Q8NH83 315 aa17.42■□□□□ 0.38
USP6NL-204ENST00000606752 CLCC1Q96S66 551 aa17.42■□□□□ 0.38
USP6NL-204ENST00000606752 LPAR2Q9HBW0 351 aa17.42■□□□□ 0.38
USP6NL-204ENST00000606752 ZNF257Q9Y2Q1 563 aa17.42■□□□□ 0.38
USP6NL-204ENST00000606752 A0A1W2PPI3 338 aa17.41■□□□□ 0.38
USP6NL-204ENST00000606752 IGLV2-23P01705 113 aa17.41■□□□□ 0.38
USP6NL-204ENST00000606752 CLEC12BQ2HXU8 276 aa17.41■□□□□ 0.38
USP6NL-204ENST00000606752 STPG2Q8N412 459 aa17.41■□□□□ 0.38
USP6NL-204ENST00000606752 TMED6Q8WW62 240 aa17.41■□□□□ 0.38
USP6NL-204ENST00000606752 PSMG3-AS1Q96PY0 264 aa17.41■□□□□ 0.38
USP6NL-204ENST00000606752 TBX15Q96SF7 602 aa17.41■□□□□ 0.38
USP6NL-204ENST00000606752 HIPK2Q9H2X6 1198 aa17.41■□□□□ 0.38
USP6NL-204ENST00000606752 OR51B2Q9Y5P1 312 aa17.41■□□□□ 0.38
USP6NL-204ENST00000606752 ASH1LQ9NR48 2969 aaKnown RBP17.41■□□□□ 0.38
USP6NL-204ENST00000606752 WNK2Q9Y3S1 2297 aa17.41■□□□□ 0.38
USP6NL-204ENST00000606752 NMBP08949 121 aa17.4■□□□□ 0.38
USP6NL-204ENST00000606752 USF1P22415 310 aaPredicted RBP17.4■□□□□ 0.38
USP6NL-204ENST00000606752 VDAC2P45880 294 aaPredicted RBP17.4■□□□□ 0.38
USP6NL-204ENST00000606752 HBG1P69891 147 aa17.4■□□□□ 0.38
USP6NL-204ENST00000606752 HBG2P69892 147 aa17.4■□□□□ 0.38
USP6NL-204ENST00000606752 MINOS1Q5TGZ0 78 aa17.4■□□□□ 0.38
USP6NL-204ENST00000606752 LHFPL4Q7Z7J7 247 aa17.4■□□□□ 0.38
USP6NL-204ENST00000606752 OR4C12Q96R67 309 aa17.4■□□□□ 0.38
USP6NL-204ENST00000606752 MINOS1-NBL1R4GNA1 71 aa17.4■□□□□ 0.38
USP6NL-204ENST00000606752 A0A1W2PRD5 423 aa17.4■□□□□ 0.38
USP6NL-204ENST00000606752 A0A1W2PRF3 423 aa17.4■□□□□ 0.38
USP6NL-204ENST00000606752 A0A1W2PRM7 423 aa17.4■□□□□ 0.38
USP6NL-204ENST00000606752 FGF2P09038 288 aa17.4■□□□□ 0.38
USP6NL-204ENST00000606752 SLC25A16P16260 332 aa17.4■□□□□ 0.38
USP6NL-204ENST00000606752 ARL16Q0P5N6 197 aa17.4■□□□□ 0.38
USP6NL-204ENST00000606752 VMA21Q3ZAQ7 101 aa17.4■□□□□ 0.38
USP6NL-204ENST00000606752 TMEM167AQ8TBQ9 72 aa17.4■□□□□ 0.38
USP6NL-204ENST00000606752 RITA1Q96K30 269 aa17.4■□□□□ 0.38
USP6NL-204ENST00000606752 ATP5SQ99766 215 aa17.4■□□□□ 0.38
USP6NL-204ENST00000606752 GINS3Q9BRX5 216 aa17.4■□□□□ 0.38
USP6NL-204ENST00000606752 HILPDAQ9Y5L2 63 aa17.4■□□□□ 0.38
USP6NL-204ENST00000606752 DFFBO76075 338 aa17.39■□□□□ 0.37
USP6NL-204ENST00000606752 UBE2E1P51965 193 aa17.39■□□□□ 0.37
USP6NL-204ENST00000606752 LGALS4P56470 323 aa17.39■□□□□ 0.37
USP6NL-204ENST00000606752 RPP30P78346 268 aaKnown RBP17.39■□□□□ 0.37
USP6NL-204ENST00000606752 PAX8Q06710 450 aa17.39■□□□□ 0.37
USP6NL-204ENST00000606752 HAPLN4Q86UW8 402 aa17.39■□□□□ 0.37
USP6NL-204ENST00000606752 TSNAXQ99598 290 aaKnown RBP17.39■□□□□ 0.37
USP6NL-204ENST00000606752 HEYLQ9NQ87 328 aaPredicted RBP17.39■□□□□ 0.37
USP6NL-204ENST00000606752 BEX4Q9NWD9 120 aaPredicted RBP17.39■□□□□ 0.37
USP6NL-204ENST00000606752 FBN2P35556 2912 aa17.39■□□□□ 0.37
USP6NL-204ENST00000606752 LINC00862A6NCI5 91 aa17.38■□□□□ 0.37
USP6NL-204ENST00000606752 HOXA1P49639 335 aaPredicted RBP17.38■□□□□ 0.37
USP6NL-204ENST00000606752 RPL8P62917 257 aaKnown RBP17.38■□□□□ 0.37
USP6NL-204ENST00000606752 OR5B3Q8NH48 314 aa17.38■□□□□ 0.37
USP6NL-204ENST00000606752 RNF5Q99942 180 aa17.38■□□□□ 0.37
USP6NL-204ENST00000606752 PTPN13Q12923 2485 aa17.38■□□□□ 0.37
USP6NL-204ENST00000606752 TEX50A0A1B0GTY4 177 aa17.37■□□□□ 0.37
USP6NL-204ENST00000606752 OOSP1A8MZH6 123 aa17.37■□□□□ 0.37
USP6NL-204ENST00000606752 TIMM23O14925 209 aa17.37■□□□□ 0.37
USP6NL-204ENST00000606752 FBXO24O75426 580 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms