RNA–Protein interactions for RNA: ENST00000606273.3

HLA-F-230, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 579 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-230ENST00000606273 TM2D3Q9BRN9 247 aa9.44□□□□□ -0.9
HLA-F-230ENST00000606273 RBM7Q9Y580 266 aaKnown RBP9.44□□□□□ -0.9
HLA-F-230ENST00000606273 RBBP9O75884 186 aa9.43□□□□□ -0.9
HLA-F-230ENST00000606273 MOSP00540 346 aa9.43□□□□□ -0.9
HLA-F-230ENST00000606273 IGKV1-16P04430 117 aa9.43□□□□□ -0.9
HLA-F-230ENST00000606273 DUTP33316 252 aaKnown RBP9.43□□□□□ -0.9
HLA-F-230ENST00000606273 BRWD1-AS2P59051 145 aa9.43□□□□□ -0.9
HLA-F-230ENST00000606273 FAAP20Q6NZ36 180 aa9.43□□□□□ -0.9
HLA-F-230ENST00000606273 ZNF645Q8N7E2 425 aa9.43□□□□□ -0.9
HLA-F-230ENST00000606273 C5orf56Q8N8D9 126 aa9.43□□□□□ -0.9
HLA-F-230ENST00000606273 Q8N9W7 124 aa9.43□□□□□ -0.9
HLA-F-230ENST00000606273 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.43□□□□□ -0.9
HLA-F-230ENST00000606273 OR5M8Q8NGP6 311 aa9.43□□□□□ -0.9
HLA-F-230ENST00000606273 DDB2Q92466 427 aa9.43□□□□□ -0.9
HLA-F-230ENST00000606273 ZNF2Q9BSG1 426 aaPredicted RBP9.43□□□□□ -0.9
HLA-F-230ENST00000606273 FXYD6Q9H0Q3 95 aa9.43□□□□□ -0.9
HLA-F-230ENST00000606273 GHITMQ9H3K2 345 aa9.43□□□□□ -0.9
HLA-F-230ENST00000606273 RBMX2Q9Y388 322 aaKnown RBP9.43□□□□□ -0.9
HLA-F-230ENST00000606273 OR5H14A6NHG9 310 aa9.42□□□□□ -0.9
HLA-F-230ENST00000606273 LINC01548A6NM66 108 aa9.42□□□□□ -0.9
HLA-F-230ENST00000606273 TNFSF12O43508 249 aa9.42□□□□□ -0.9
HLA-F-230ENST00000606273 GSTZ1O43708 216 aaPredicted RBP9.42□□□□□ -0.9
HLA-F-230ENST00000606273 LY86O95711 162 aa9.42□□□□□ -0.9
HLA-F-230ENST00000606273 CD74P04233 296 aa9.42□□□□□ -0.9
HLA-F-230ENST00000606273 TAS2R46P59540 309 aa9.42□□□□□ -0.9
HLA-F-230ENST00000606273 ACTBP60709 375 aa9.42□□□□□ -0.9
HLA-F-230ENST00000606273 ZNF818PQ6ZRF7 136 aa9.42□□□□□ -0.9
HLA-F-230ENST00000606273 TMEM17Q86X19 198 aa9.42□□□□□ -0.9
HLA-F-230ENST00000606273 C15orf40Q8WUR7 153 aa9.42□□□□□ -0.9
HLA-F-230ENST00000606273 SECTM1Q8WVN6 248 aa9.42□□□□□ -0.9
HLA-F-230ENST00000606273 MOB4Q9Y3A3 225 aa9.42□□□□□ -0.9
HLA-F-230ENST00000606273 NCBP2LA6PVI3 153 aaKnown RBP9.41□□□□□ -0.9
HLA-F-230ENST00000606273 H7C2Y5 167 aa9.41□□□□□ -0.9
HLA-F-230ENST00000606273 ZNF735P0CB33 412 aa9.41□□□□□ -0.9
HLA-F-230ENST00000606273 GNRHRP30968 328 aa9.41□□□□□ -0.9
HLA-F-230ENST00000606273 S100A5P33763 92 aa9.41□□□□□ -0.9
HLA-F-230ENST00000606273 ETV6P41212 452 aa9.41□□□□□ -0.9
HLA-F-230ENST00000606273 MRPS10P82664 201 aaKnown RBP9.41□□□□□ -0.9
HLA-F-230ENST00000606273 C9orf152Q5JTZ5 239 aa9.41□□□□□ -0.9
HLA-F-230ENST00000606273 AADACL3Q5VUY0 350 aa9.41□□□□□ -0.9
HLA-F-230ENST00000606273 FAM71E2Q8N5Q1 922 aa9.41□□□□□ -0.9
HLA-F-230ENST00000606273 TMEM229BQ8NBD8 167 aa9.41□□□□□ -0.9
HLA-F-230ENST00000606273 TRIM63Q969Q1 353 aa9.41□□□□□ -0.9
HLA-F-230ENST00000606273 MRGPRFQ96AM1 343 aa9.41□□□□□ -0.9
HLA-F-230ENST00000606273 MOB3AQ96BX8 217 aa9.41□□□□□ -0.9
HLA-F-230ENST00000606273 SDHCQ99643 169 aaPredicted RBP9.41□□□□□ -0.9
HLA-F-230ENST00000606273 HSPB9Q9BQS6 159 aa9.41□□□□□ -0.9
HLA-F-230ENST00000606273 SRRQ9GZT4 340 aa9.41□□□□□ -0.9
HLA-F-230ENST00000606273 SLC5A7Q9GZV3 580 aa9.41□□□□□ -0.9
HLA-F-230ENST00000606273 TAS2R8Q9NYW2 309 aa9.41□□□□□ -0.9
HLA-F-230ENST00000606273 WASHC3Q9Y3C0 194 aa9.41□□□□□ -0.9
HLA-F-230ENST00000606273 SRRM4A7MD48 611 aaKnown RBP9.4□□□□□ -0.9
HLA-F-230ENST00000606273 IGLV2-23P01705 113 aa9.4□□□□□ -0.9
HLA-F-230ENST00000606273 MMDQ15546 238 aa9.4□□□□□ -0.9
HLA-F-230ENST00000606273 PYDC2Q56P42 97 aa9.4□□□□□ -0.9
HLA-F-230ENST00000606273 RNASE10Q5GAN6 216 aaKnown RBP9.4□□□□□ -0.9
HLA-F-230ENST00000606273 OR2B11Q5JQS5 317 aa9.4□□□□□ -0.9
HLA-F-230ENST00000606273 STEAP1BQ6NZ63 245 aa9.4□□□□□ -0.9
HLA-F-230ENST00000606273 NPBQ8NG41 125 aa9.4□□□□□ -0.9
HLA-F-230ENST00000606273 OR6F1Q8NGZ6 308 aa9.4□□□□□ -0.9
HLA-F-230ENST00000606273 THAP7Q9BT49 309 aaPredicted RBP9.4□□□□□ -0.9
HLA-F-230ENST00000606273 SLC35D1Q9NTN3 355 aa9.4□□□□□ -0.9
HLA-F-230ENST00000606273 ALMS1Q8TCU4 4167 aa9.4□□□□□ -0.9
HLA-F-230ENST00000606273 ANKRD20A5PA0PJZ0 165 aa9.39□□□□□ -0.91
HLA-F-230ENST00000606273 FCN1O00602 326 aa9.39□□□□□ -0.91
HLA-F-230ENST00000606273 NBR2O15453 112 aa9.39□□□□□ -0.91
HLA-F-230ENST00000606273 FGF16O43320 207 aa9.39□□□□□ -0.91
HLA-F-230ENST00000606273 NDUFA3O95167 84 aa9.39□□□□□ -0.91
HLA-F-230ENST00000606273 RAB3DO95716 219 aa9.39□□□□□ -0.91
HLA-F-230ENST00000606273 MC5RP33032 325 aa9.39□□□□□ -0.91
HLA-F-230ENST00000606273 TAS2R19P59542 299 aa9.39□□□□□ -0.91
HLA-F-230ENST00000606273 HERV-K104P61576 105 aa9.39□□□□□ -0.91
HLA-F-230ENST00000606273 TSPAN5P62079 268 aa9.39□□□□□ -0.91
HLA-F-230ENST00000606273 SSBP1Q04837 148 aaKnown RBP9.39□□□□□ -0.91
HLA-F-230ENST00000606273 BAK1Q16611 211 aa9.39□□□□□ -0.91
HLA-F-230ENST00000606273 DEFB136Q30KP8 78 aa9.39□□□□□ -0.91
HLA-F-230ENST00000606273 LHFPL1Q86WI0 220 aa9.39□□□□□ -0.91
HLA-F-230ENST00000606273 OR4C16Q8NGL9 310 aa9.39□□□□□ -0.91
HLA-F-230ENST00000606273 NOL4LQ96MY1 436 aaPredicted RBP9.39□□□□□ -0.91
HLA-F-230ENST00000606273 FBXL15Q9H469 300 aa9.39□□□□□ -0.91
HLA-F-230ENST00000606273 RABL2AQ9UBK7 228 aaPredicted RBP9.39□□□□□ -0.91
HLA-F-230ENST00000606273 ZNF107Q9UII5 783 aaPredicted RBP9.39□□□□□ -0.91
HLA-F-230ENST00000606273 RABL2BQ9UNT1 228 aa9.39□□□□□ -0.91
HLA-F-230ENST00000606273 APOA2P02652 100 aa9.38□□□□□ -0.91
HLA-F-230ENST00000606273 INSL3P51460 131 aa9.38□□□□□ -0.91
HLA-F-230ENST00000606273 RPS16P62249 146 aaKnown RBP9.38□□□□□ -0.91
HLA-F-230ENST00000606273 KLF9Q13886 244 aaPredicted RBP9.38□□□□□ -0.91
HLA-F-230ENST00000606273 PSG5Q15238 335 aa9.38□□□□□ -0.91
HLA-F-230ENST00000606273 MSMO1Q15800 293 aa9.38□□□□□ -0.91
HLA-F-230ENST00000606273 MRGPRG-AS1Q2M3A8 158 aa9.38□□□□□ -0.91
HLA-F-230ENST00000606273 TMEM177Q53S58 311 aa9.38□□□□□ -0.91
HLA-F-230ENST00000606273 ACTBL2Q562R1 376 aa9.38□□□□□ -0.91
HLA-F-230ENST00000606273 KCTD9Q7L273 389 aa9.38□□□□□ -0.91
HLA-F-230ENST00000606273 PDPNQ86YL7 162 aa9.38□□□□□ -0.91
HLA-F-230ENST00000606273 Q8N402 240 aa9.38□□□□□ -0.91
HLA-F-230ENST00000606273 COMMD1Q8N668 190 aa9.38□□□□□ -0.91
HLA-F-230ENST00000606273 OR8H1Q8NGG4 311 aa9.38□□□□□ -0.91
HLA-F-230ENST00000606273 CHPT1Q8WUD6 406 aa9.38□□□□□ -0.91
HLA-F-230ENST00000606273 LIN7CQ9NUP9 197 aaKnown RBP9.38□□□□□ -0.91
HLA-F-230ENST00000606273 LINC00527Q9UJ94 153 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms