RNA–Protein interactions for RNA: ENST00000601252.1

TIMM50-215, Transcript of translocase of inner mitochondrial membrane 50, human

TSL 5

Gene TIMM50, Length 1,737 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TIMM50-215	ENST00000601252	CA5BP1	Q8WTZ4	195 aa		11.75	□□□□□ -0.53
TIMM50-215	ENST00000601252	RAB1C	Q92928	201 aa		11.75	□□□□□ -0.53
TIMM50-215	ENST00000601252	RNASE6	Q93091	150 aa	Known RBP	11.75	□□□□□ -0.53
TIMM50-215	ENST00000601252	C12orf57	Q99622	126 aa		11.75	□□□□□ -0.53
TIMM50-215	ENST00000601252	SAP30L	Q9HAJ7	183 aa		11.75	□□□□□ -0.53
TIMM50-215	ENST00000601252	NAT8	Q9UHE5	227 aa		11.75	□□□□□ -0.53
TIMM50-215	ENST00000601252	IGSF10	Q6WRI0	2623 aa		11.75	□□□□□ -0.53
TIMM50-215	ENST00000601252	ARFGEF3	Q5TH69	2177 aa		11.75	□□□□□ -0.53
TIMM50-215	ENST00000601252	TRAV38-1	A0A0B4J264	116 aa		11.74	□□□□□ -0.53
TIMM50-215	ENST00000601252	KBTBD11-OT1	A0A1B0GTJ5	212 aa		11.74	□□□□□ -0.53
TIMM50-215	ENST00000601252	hCG_1809904	A0A1W2PP81	198 aa		11.74	□□□□□ -0.53
TIMM50-215	ENST00000601252		A0A1W2PR64	198 aa		11.74	□□□□□ -0.53
TIMM50-215	ENST00000601252		A0A1W2PRV1	198 aa		11.74	□□□□□ -0.53
TIMM50-215	ENST00000601252	ZNF729	A6NN14	1252 aa	Predicted RBP	11.74	□□□□□ -0.53
TIMM50-215	ENST00000601252	LOXL3	P58215	753 aa		11.74	□□□□□ -0.53
TIMM50-215	ENST00000601252	FFAR4	Q5NUL3	377 aa		11.74	□□□□□ -0.53
TIMM50-215	ENST00000601252	NCR3LG1	Q68D85	454 aa		11.74	□□□□□ -0.53
TIMM50-215	ENST00000601252	ZNF600	Q6ZNG1	722 aa		11.74	□□□□□ -0.53
TIMM50-215	ENST00000601252	DMRTC2	Q8IXT2	367 aa	Predicted RBP	11.74	□□□□□ -0.53
TIMM50-215	ENST00000601252	RPP25L	Q8N5L8	163 aa	Known RBP	11.74	□□□□□ -0.53
TIMM50-215	ENST00000601252	TXNDC17	Q9BRA2	123 aa		11.74	□□□□□ -0.53
TIMM50-215	ENST00000601252	IFI27L2	Q9H2X8	130 aa		11.74	□□□□□ -0.53
TIMM50-215	ENST00000601252	VSIR	Q9H7M9	311 aa		11.74	□□□□□ -0.53
TIMM50-215	ENST00000601252	GFOD1	Q9NXC2	390 aa		11.74	□□□□□ -0.53
TIMM50-215	ENST00000601252	RALY	Q9UKM9	306 aa	Known RBP	11.74	□□□□□ -0.53
TIMM50-215	ENST00000601252	ZNF727	A8MUV8	499 aa		11.74	□□□□□ -0.53
TIMM50-215	ENST00000601252	DEFB108A	A8MXU0	73 aa		11.74	□□□□□ -0.53
TIMM50-215	ENST00000601252	AP4M1	O00189	453 aa		11.74	□□□□□ -0.53
TIMM50-215	ENST00000601252	CCL21	O00585	134 aa		11.74	□□□□□ -0.53
TIMM50-215	ENST00000601252	OPN1MW	P04001	364 aa		11.74	□□□□□ -0.53
TIMM50-215	ENST00000601252	CD3E	P07766	207 aa		11.74	□□□□□ -0.53
TIMM50-215	ENST00000601252	OPN1MW2	P0DN77	364 aa		11.74	□□□□□ -0.53
TIMM50-215	ENST00000601252	OPN1MW3	P0DN78	364 aa		11.74	□□□□□ -0.53
TIMM50-215	ENST00000601252	CGB3	P0DN86	165 aa		11.74	□□□□□ -0.53
TIMM50-215	ENST00000601252	CGB7	P0DN87	165 aa		11.74	□□□□□ -0.53
TIMM50-215	ENST00000601252	SFTPC	P11686	197 aa		11.74	□□□□□ -0.53
TIMM50-215	ENST00000601252	MDK	P21741	143 aa	Predicted RBP	11.74	□□□□□ -0.53
TIMM50-215	ENST00000601252	CD1B	P29016	333 aa		11.74	□□□□□ -0.53
TIMM50-215	ENST00000601252	CCL8	P80075	99 aa		11.74	□□□□□ -0.53
TIMM50-215	ENST00000601252	EFNB3	Q15768	340 aa		11.74	□□□□□ -0.53
TIMM50-215	ENST00000601252	OR10A7	Q8NGE5	316 aa		11.74	□□□□□ -0.53
TIMM50-215	ENST00000601252	PLPPR2	Q96GM1	343 aa		11.74	□□□□□ -0.53
TIMM50-215	ENST00000601252	SDF2L1	Q9HCN8	221 aa		11.74	□□□□□ -0.53
TIMM50-215	ENST00000601252	WDR83OS	Q9Y284	106 aa		11.74	□□□□□ -0.53
TIMM50-215	ENST00000601252	HRAS	P01112	189 aa		11.73	□□□□□ -0.53
TIMM50-215	ENST00000601252	GYPA	P02724	150 aa		11.73	□□□□□ -0.53
TIMM50-215	ENST00000601252	SELL	P14151	372 aa		11.73	□□□□□ -0.53
TIMM50-215	ENST00000601252	RPS10	P46783	165 aa	Known RBP	11.73	□□□□□ -0.53
TIMM50-215	ENST00000601252	RND2	P52198	227 aa		11.73	□□□□□ -0.53
TIMM50-215	ENST00000601252	ATP5I	P56385	69 aa	Predicted RBP	11.73	□□□□□ -0.53
TIMM50-215	ENST00000601252	ELOB	Q15370	118 aa		11.73	□□□□□ -0.53
TIMM50-215	ENST00000601252	LTC4S	Q16873	150 aa		11.73	□□□□□ -0.53
TIMM50-215	ENST00000601252	C17orf58	Q2M2W7	97 aa		11.73	□□□□□ -0.53
TIMM50-215	ENST00000601252	FAM53A	Q6NSI3	398 aa	Predicted RBP	11.73	□□□□□ -0.53
TIMM50-215	ENST00000601252	CYP2G1P	Q6ZSU1	146 aa		11.73	□□□□□ -0.53
TIMM50-215	ENST00000601252	ZDHHC16	Q969W1	377 aa		11.73	□□□□□ -0.53
TIMM50-215	ENST00000601252	QTRT1	Q9BXR0	403 aa	Known RBP	11.73	□□□□□ -0.53
TIMM50-215	ENST00000601252	MS4A5	Q9H3V2	200 aa		11.73	□□□□□ -0.53
TIMM50-215	ENST00000601252	LINC00574	Q9H8X3	128 aa		11.73	□□□□□ -0.53
TIMM50-215	ENST00000601252	DYNLRB1	Q9NP97	96 aa		11.73	□□□□□ -0.53
TIMM50-215	ENST00000601252	YLPM1	P49750	1951 aa	Known RBP	11.73	□□□□□ -0.53
TIMM50-215	ENST00000601252	TMEM8B	A6NDV4	472 aa		11.72	□□□□□ -0.53
TIMM50-215	ENST00000601252	FAM90A27P	A6NNH2	459 aa		11.72	□□□□□ -0.53
TIMM50-215	ENST00000601252	C15orf62	A8K5M9	175 aa		11.72	□□□□□ -0.53
TIMM50-215	ENST00000601252	ATXN7	O15265	892 aa	Predicted RBP	11.72	□□□□□ -0.53
TIMM50-215	ENST00000601252	KBTBD11	O94819	623 aa		11.72	□□□□□ -0.53
TIMM50-215	ENST00000601252	IFNA10	P01566	189 aa		11.72	□□□□□ -0.53
TIMM50-215	ENST00000601252	IGHV2-5	P01817	119 aa		11.72	□□□□□ -0.53
TIMM50-215	ENST00000601252	APOBEC3A	P31941	199 aa	Predicted RBP	11.72	□□□□□ -0.53
TIMM50-215	ENST00000601252	CDC34	P49427	236 aa	Predicted RBP	11.72	□□□□□ -0.53
TIMM50-215	ENST00000601252	FGF8	P55075	233 aa	Predicted RBP	11.72	□□□□□ -0.53
TIMM50-215	ENST00000601252	ACSM6	Q6P461	480 aa		11.72	□□□□□ -0.53
TIMM50-215	ENST00000601252	CORO2A	Q92828	525 aa		11.72	□□□□□ -0.53
TIMM50-215	ENST00000601252	CCL13	Q99616	98 aa		11.72	□□□□□ -0.53
TIMM50-215	ENST00000601252	ENY2	Q9NPA8	101 aa		11.72	□□□□□ -0.53
TIMM50-215	ENST00000601252	HEYL	Q9NQ87	328 aa	Predicted RBP	11.72	□□□□□ -0.53
TIMM50-215	ENST00000601252	MBD3L2B	A0A1B0GVZ6	204 aa	Predicted RBP	11.72	□□□□□ -0.53
TIMM50-215	ENST00000601252	PCP4L1	A6NKN8	68 aa		11.72	□□□□□ -0.53
TIMM50-215	ENST00000601252	SEC14L6	B5MCN3	397 aa		11.72	□□□□□ -0.53
TIMM50-215	ENST00000601252		E7EQL1	145 aa		11.72	□□□□□ -0.53
TIMM50-215	ENST00000601252	FNDC10	F2Z333	226 aa		11.72	□□□□□ -0.53
TIMM50-215	ENST00000601252	OR9G9	P0C7N8	305 aa		11.72	□□□□□ -0.53
TIMM50-215	ENST00000601252	OPRK1	P41145	380 aa		11.72	□□□□□ -0.53
TIMM50-215	ENST00000601252	TMEM241	Q24JQ0	296 aa		11.72	□□□□□ -0.53
TIMM50-215	ENST00000601252	FAM216B	Q8N7L0	139 aa		11.72	□□□□□ -0.53
TIMM50-215	ENST00000601252	DEFB108B	Q8NET1	73 aa		11.72	□□□□□ -0.53
TIMM50-215	ENST00000601252	DDB2	Q92466	427 aa		11.72	□□□□□ -0.53
TIMM50-215	ENST00000601252	SMIM7	Q9BQ49	75 aa		11.72	□□□□□ -0.53
TIMM50-215	ENST00000601252	TMEM140	Q9NV12	185 aa		11.72	□□□□□ -0.53
TIMM50-215	ENST00000601252	IDI2-AS1	Q9NZ38	188 aa		11.72	□□□□□ -0.53
TIMM50-215	ENST00000601252	SMG1	Q96Q15	3661 aa	Known RBP	11.71	□□□□□ -0.54
TIMM50-215	ENST00000601252	PPIAL4E	A0A075B759	164 aa		11.71	□□□□□ -0.54
TIMM50-215	ENST00000601252	hADV38S2	A0JD32	116 aa		11.71	□□□□□ -0.54
TIMM50-215	ENST00000601252	C15orf61	A6NNL5	157 aa		11.71	□□□□□ -0.54
TIMM50-215	ENST00000601252		B9A039	149 aa		11.71	□□□□□ -0.54
TIMM50-215	ENST00000601252	PPIAL4D	F5H284	164 aa		11.71	□□□□□ -0.54
TIMM50-215	ENST00000601252	TMEM178B	H3BS89	294 aa		11.71	□□□□□ -0.54
TIMM50-215	ENST00000601252	PDE6D	O43924	150 aa		11.71	□□□□□ -0.54
TIMM50-215	ENST00000601252	VENTX	O95231	258 aa		11.71	□□□□□ -0.54
TIMM50-215	ENST00000601252	FBP1	P09467	338 aa		11.71	□□□□□ -0.54

Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms