RNA–Protein interactions for RNA: ENST00000600244.5

SSBP4-207, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2

Gene SSBP4, Length 622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-207ENST00000600244 ITGB1BP1O14713 200 aa13.21□□□□□ -0.29
SSBP4-207ENST00000600244 SLC31A2O15432 143 aa13.21□□□□□ -0.29
SSBP4-207ENST00000600244 GSTZ1O43708 216 aaPredicted RBP13.21□□□□□ -0.29
SSBP4-207ENST00000600244 ZNF134P52741 427 aa13.21□□□□□ -0.29
SSBP4-207ENST00000600244 IL18Q14116 193 aa13.21□□□□□ -0.29
SSBP4-207ENST00000600244 LYSMD2Q8IV50 215 aa13.21□□□□□ -0.29
SSBP4-207ENST00000600244 SMIM4Q8WVI0 70 aa13.21□□□□□ -0.29
SSBP4-207ENST00000600244 IL1F10Q8WWZ1 152 aa13.21□□□□□ -0.29
SSBP4-207ENST00000600244 SLA2Q9H6Q3 261 aa13.21□□□□□ -0.29
SSBP4-207ENST00000600244 OR1A1Q9P1Q5 309 aa13.21□□□□□ -0.29
SSBP4-207ENST00000600244 GNG12Q9UBI6 72 aa13.21□□□□□ -0.29
SSBP4-207ENST00000600244 SLC23A1Q9UHI7 598 aa13.21□□□□□ -0.29
SSBP4-207ENST00000600244 RBMX2Q9Y388 322 aaKnown RBP13.21□□□□□ -0.29
SSBP4-207ENST00000600244 NBR2O15453 112 aa13.2□□□□□ -0.3
SSBP4-207ENST00000600244 CTXN2P0C2S0 81 aa13.2□□□□□ -0.3
SSBP4-207ENST00000600244 ZBTB25P24278 435 aa13.2□□□□□ -0.3
SSBP4-207ENST00000600244 PPP1CCP36873 323 aaKnown RBP13.2□□□□□ -0.3
SSBP4-207ENST00000600244 SSBP1Q04837 148 aaKnown RBP13.2□□□□□ -0.3
SSBP4-207ENST00000600244 CT45A1Q5HYN5 189 aa13.2□□□□□ -0.3
SSBP4-207ENST00000600244 FAM131AQ6UXB0 335 aa13.2□□□□□ -0.3
SSBP4-207ENST00000600244 NPBQ8NG41 125 aa13.2□□□□□ -0.3
SSBP4-207ENST00000600244 OR10V1Q8NGI7 309 aa13.2□□□□□ -0.3
SSBP4-207ENST00000600244 CT45A3Q8NHU0 189 aa13.2□□□□□ -0.3
SSBP4-207ENST00000600244 FCAMRQ8WWV6 532 aa13.2□□□□□ -0.3
SSBP4-207ENST00000600244 ZNF251Q9BRH9 671 aa13.2□□□□□ -0.3
SSBP4-207ENST00000600244 PARP12Q9H0J9 701 aaKnown RBP13.2□□□□□ -0.3
SSBP4-207ENST00000600244 KLK11Q9UBX7 282 aa13.2□□□□□ -0.3
SSBP4-207ENST00000600244 NDUFA3O95167 84 aa13.19□□□□□ -0.3
SSBP4-207ENST00000600244 RCVRNP35243 200 aa13.19□□□□□ -0.3
SSBP4-207ENST00000600244 CX3CL1P78423 397 aa13.19□□□□□ -0.3
SSBP4-207ENST00000600244 TMEM267Q0VDI3 215 aaPredicted RBP13.19□□□□□ -0.3
SSBP4-207ENST00000600244 AKIRIN2Q53H80 203 aa13.19□□□□□ -0.3
SSBP4-207ENST00000600244 ACTBL2Q562R1 376 aa13.19□□□□□ -0.3
SSBP4-207ENST00000600244 H1FOOQ8IZA3 346 aaPredicted RBP13.19□□□□□ -0.3
SSBP4-207ENST00000600244 MFSD4AQ8N468 514 aa13.19□□□□□ -0.3
SSBP4-207ENST00000600244 OR5AP2Q8NGF4 316 aa13.19□□□□□ -0.3
SSBP4-207ENST00000600244 AGMATQ9BSE5 352 aa13.19□□□□□ -0.3
SSBP4-207ENST00000600244 AKIP1Q9NQ31 210 aa13.19□□□□□ -0.3
SSBP4-207ENST00000600244 IFT46Q9NQC8 304 aa13.19□□□□□ -0.3
SSBP4-207ENST00000600244 MSGN1A6NI15 193 aa13.18□□□□□ -0.3
SSBP4-207ENST00000600244 LANCL1O43813 399 aa13.18□□□□□ -0.3
SSBP4-207ENST00000600244 RBBP9O75884 186 aa13.18□□□□□ -0.3
SSBP4-207ENST00000600244 CEACAM6P40199 344 aa13.18□□□□□ -0.3
SSBP4-207ENST00000600244 CD300EQ496F6 205 aaPredicted RBP13.18□□□□□ -0.3
SSBP4-207ENST00000600244 SPANXN2Q5MJ10 180 aa13.18□□□□□ -0.3
SSBP4-207ENST00000600244 ODF3L1Q8IXM7 274 aa13.18□□□□□ -0.3
SSBP4-207ENST00000600244 OR10J5Q8NHC4 309 aa13.18□□□□□ -0.3
SSBP4-207ENST00000600244 SRRQ9GZT4 340 aa13.18□□□□□ -0.3
SSBP4-207ENST00000600244 ANKRD34BA5PLL1 514 aa13.17□□□□□ -0.3
SSBP4-207ENST00000600244 BET1O15155 118 aa13.17□□□□□ -0.3
SSBP4-207ENST00000600244 TUSC2O75896 110 aa13.17□□□□□ -0.3
SSBP4-207ENST00000600244 TRGV3P03979 118 aa13.17□□□□□ -0.3
SSBP4-207ENST00000600244 FCER2P06734 321 aa13.17□□□□□ -0.3
SSBP4-207ENST00000600244 ZNF45Q02386 682 aa13.17□□□□□ -0.3
SSBP4-207ENST00000600244 DYRK1AQ13627 763 aa13.17□□□□□ -0.3
SSBP4-207ENST00000600244 CDK10Q15131 360 aa13.17□□□□□ -0.3
SSBP4-207ENST00000600244 RNASE12Q5GAN4 147 aaKnown RBP13.17□□□□□ -0.3
SSBP4-207ENST00000600244 TRIM63Q969Q1 353 aa13.17□□□□□ -0.3
SSBP4-207ENST00000600244 SDHCQ99643 169 aaPredicted RBP13.17□□□□□ -0.3
SSBP4-207ENST00000600244 GGTLC1Q9BX51 225 aa13.17□□□□□ -0.3
SSBP4-207ENST00000600244 C11orf54Q9H0W9 315 aaPredicted RBP13.17□□□□□ -0.3
SSBP4-207ENST00000600244 IFI27L2Q9H2X8 130 aa13.17□□□□□ -0.3
SSBP4-207ENST00000600244 RDH8Q9NYR8 311 aa13.17□□□□□ -0.3
SSBP4-207ENST00000600244 TP53TG1Q9Y2A0 90 aa13.17□□□□□ -0.3
SSBP4-207ENST00000600244 TAS2R46P59540 309 aa13.16□□□□□ -0.3
SSBP4-207ENST00000600244 UNQ5815/PRO19632Q6UWF5 114 aa13.16□□□□□ -0.3
SSBP4-207ENST00000600244 PPP1R27Q86WC6 154 aa13.16□□□□□ -0.3
SSBP4-207ENST00000600244 TMEM229BQ8NBD8 167 aa13.16□□□□□ -0.3
SSBP4-207ENST00000600244 EDARADDQ8WWZ3 215 aa13.16□□□□□ -0.3
SSBP4-207ENST00000600244 ABHD14AQ9BUJ0 271 aa13.16□□□□□ -0.3
SSBP4-207ENST00000600244 RNF150Q9ULK6 438 aa13.16□□□□□ -0.3
SSBP4-207ENST00000600244 FCN1O00602 326 aa13.15□□□□□ -0.3
SSBP4-207ENST00000600244 CD74P04233 296 aa13.15□□□□□ -0.3
SSBP4-207ENST00000600244 HLA-DMAP28067 261 aa13.15□□□□□ -0.3
SSBP4-207ENST00000600244 CD40LGP29965 261 aa13.15□□□□□ -0.3
SSBP4-207ENST00000600244 BMI1P35226 326 aa13.15□□□□□ -0.3
SSBP4-207ENST00000600244 ARPC4P59998 168 aa13.15□□□□□ -0.3
SSBP4-207ENST00000600244 TATDN3Q17R31 274 aa13.15□□□□□ -0.3
SSBP4-207ENST00000600244 PYDC2Q56P42 97 aa13.15□□□□□ -0.3
SSBP4-207ENST00000600244 DHRS11Q6UWP2 260 aa13.15□□□□□ -0.3
SSBP4-207ENST00000600244 GDPD1Q8N9F7 314 aa13.15□□□□□ -0.3
SSBP4-207ENST00000600244 OR2AK2Q8NG84 335 aa13.15□□□□□ -0.3
SSBP4-207ENST00000600244 GIMAP1Q8WWP7 306 aa13.15□□□□□ -0.3
SSBP4-207ENST00000600244 GAB2Q9UQC2 676 aa13.15□□□□□ -0.3
SSBP4-207ENST00000600244 PRSS29PA6NIE9 313 aa13.14□□□□□ -0.31
SSBP4-207ENST00000600244 ST8SIA5O15466 376 aa13.14□□□□□ -0.31
SSBP4-207ENST00000600244 PROP1O75360 226 aa13.14□□□□□ -0.31
SSBP4-207ENST00000600244 OR2A4O95047 310 aa13.14□□□□□ -0.31
SSBP4-207ENST00000600244 PMP2P02689 132 aa13.14□□□□□ -0.31
SSBP4-207ENST00000600244 TBPP20226 339 aa13.14□□□□□ -0.31
SSBP4-207ENST00000600244 NFYAP23511 347 aaPredicted RBP13.14□□□□□ -0.31
SSBP4-207ENST00000600244 HRH1P35367 487 aa13.14□□□□□ -0.31
SSBP4-207ENST00000600244 RFX2P48378 723 aa13.14□□□□□ -0.31
SSBP4-207ENST00000600244 LFNGQ8NES3 379 aa13.14□□□□□ -0.31
SSBP4-207ENST00000600244 OR5H2Q8NGV7 314 aa13.14□□□□□ -0.31
SSBP4-207ENST00000600244 GINS4Q9BRT9 223 aa13.14□□□□□ -0.31
SSBP4-207ENST00000600244 FAM103A1Q9BTL3 118 aaKnown RBP13.14□□□□□ -0.31
SSBP4-207ENST00000600244 TAS2R8Q9NYW2 309 aa13.14□□□□□ -0.31
SSBP4-207ENST00000600244 OR2W1Q9Y3N9 320 aa13.14□□□□□ -0.31
SSBP4-207ENST00000600244 LOC102724200A0A096LPH7 203 aaPredicted RBP13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms