RNA–Protein interactions for RNA: ENST00000599454.5

PNKP-212, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 529 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-212ENST00000599454 TMEM61Q8N0U2 210 aa15.87■□□□□ 0.13
PNKP-212ENST00000599454 OR52B4Q8NGK2 314 aa15.87■□□□□ 0.13
PNKP-212ENST00000599454 TMEM167AQ8TBQ9 72 aa15.87■□□□□ 0.13
PNKP-212ENST00000599454 LINC00476Q8WZB0 136 aa15.87■□□□□ 0.13
PNKP-212ENST00000599454 EEF1AKMT3Q96AZ1 226 aa15.87■□□□□ 0.13
PNKP-212ENST00000599454 FYTTD1Q96QD9 318 aaKnown RBP15.87■□□□□ 0.13
PNKP-212ENST00000599454 HSD17B10Q99714 261 aaKnown RBP15.87■□□□□ 0.13
PNKP-212ENST00000599454 KLK9Q9UKQ9 250 aa15.87■□□□□ 0.13
PNKP-212ENST00000599454 TMEM213A2RRL7 107 aa15.86■□□□□ 0.13
PNKP-212ENST00000599454 CRYGCP07315 174 aa15.86■□□□□ 0.13
PNKP-212ENST00000599454 IL6RP08887 468 aaPredicted RBP15.86■□□□□ 0.13
PNKP-212ENST00000599454 ZNF735P0CB33 412 aa15.86■□□□□ 0.13
PNKP-212ENST00000599454 HIST1H1BP16401 226 aaKnown RBP15.86■□□□□ 0.13
PNKP-212ENST00000599454 MYL9P24844 172 aa15.86■□□□□ 0.13
PNKP-212ENST00000599454 OR10A3P58181 314 aa15.86■□□□□ 0.13
PNKP-212ENST00000599454 CLEC19AQ6UXS0 136 aa15.86■□□□□ 0.13
PNKP-212ENST00000599454 PUSL1Q8N0Z8 303 aaKnown RBP15.86■□□□□ 0.13
PNKP-212ENST00000599454 CCDC140Q96MF4 163 aa15.86■□□□□ 0.13
PNKP-212ENST00000599454 FANCD2OSQ96PS1 177 aa15.86■□□□□ 0.13
PNKP-212ENST00000599454 DCSTAMPQ9H295 470 aa15.86■□□□□ 0.13
PNKP-212ENST00000599454 LOC102724200A0A096LPH7 203 aaPredicted RBP15.85■□□□□ 0.13
PNKP-212ENST00000599454 J3QRK9 145 aa15.85■□□□□ 0.13
PNKP-212ENST00000599454 NDUFB8O95169 186 aa15.85■□□□□ 0.13
PNKP-212ENST00000599454 PSMB6P28072 239 aa15.85■□□□□ 0.13
PNKP-212ENST00000599454 RPL30P62888 115 aaKnown RBP15.85■□□□□ 0.13
PNKP-212ENST00000599454 OR2B11Q5JQS5 317 aa15.85■□□□□ 0.13
PNKP-212ENST00000599454 VKORC1L1Q8N0U8 176 aa15.85■□□□□ 0.13
PNKP-212ENST00000599454 CACNG8Q8WXS5 425 aa15.85■□□□□ 0.13
PNKP-212ENST00000599454 MARC2Q969Z3 335 aa15.85■□□□□ 0.13
PNKP-212ENST00000599454 OVOL2Q9BRP0 275 aa15.85■□□□□ 0.13
PNKP-212ENST00000599454 ATG5Q9H1Y0 275 aa15.85■□□□□ 0.13
PNKP-212ENST00000599454 TRAV25A0A0B4J276 109 aa15.84■□□□□ 0.13
PNKP-212ENST00000599454 ZNF320A2RRD8 509 aa15.84■□□□□ 0.13
PNKP-212ENST00000599454 IGLV2-14P01704 120 aa15.84■□□□□ 0.13
PNKP-212ENST00000599454 RAB3BP20337 219 aa15.84■□□□□ 0.13
PNKP-212ENST00000599454 NFYAP23511 347 aaPredicted RBP15.84■□□□□ 0.13
PNKP-212ENST00000599454 CNIH2Q6PI25 160 aa15.84■□□□□ 0.13
PNKP-212ENST00000599454 UXS1Q8NBZ7 420 aa15.84■□□□□ 0.13
PNKP-212ENST00000599454 MLXQ9UH92 298 aa15.84■□□□□ 0.13
PNKP-212ENST00000599454 TRBV7-1A0A0A6YYK4 115 aa15.83■□□□□ 0.12
PNKP-212ENST00000599454 HRASP01112 189 aa15.83■□□□□ 0.12
PNKP-212ENST00000599454 IGHV3-23P01764 117 aa15.83■□□□□ 0.12
PNKP-212ENST00000599454 CTRB1P17538 263 aa15.83■□□□□ 0.12
PNKP-212ENST00000599454 CRHBPP24387 322 aa15.83■□□□□ 0.12
PNKP-212ENST00000599454 TBCEQ15813 527 aaPredicted RBP15.83■□□□□ 0.12
PNKP-212ENST00000599454 CDNFQ49AH0 187 aa15.83■□□□□ 0.12
PNKP-212ENST00000599454 HACD4Q5VWC8 232 aa15.83■□□□□ 0.12
PNKP-212ENST00000599454 CTRB2Q6GPI1 263 aa15.83■□□□□ 0.12
PNKP-212ENST00000599454 C19orf35Q6ZS72 473 aa15.83■□□□□ 0.12
PNKP-212ENST00000599454 ZNF367Q7RTV3 350 aa15.83■□□□□ 0.12
PNKP-212ENST00000599454 TCTEX1D2Q8WW35 142 aa15.83■□□□□ 0.12
PNKP-212ENST00000599454 CXorf58Q96LI9 332 aa15.83■□□□□ 0.12
PNKP-212ENST00000599454 ST6GALNAC5Q9BVH7 336 aa15.83■□□□□ 0.12
PNKP-212ENST00000599454 NUPR2A6NF83 97 aa15.82■□□□□ 0.12
PNKP-212ENST00000599454 E7EUB6 86 aa15.82■□□□□ 0.12
PNKP-212ENST00000599454 AREGP15514 252 aa15.82■□□□□ 0.12
PNKP-212ENST00000599454 GALP22466 123 aa15.82■□□□□ 0.12
PNKP-212ENST00000599454 AQP4P55087 323 aa15.82■□□□□ 0.12
PNKP-212ENST00000599454 RPL8P62917 257 aaKnown RBP15.82■□□□□ 0.12
PNKP-212ENST00000599454 EIF4EBP1Q13541 118 aaPredicted RBP15.82■□□□□ 0.12
PNKP-212ENST00000599454 ZNF66Q6ZN08 573 aa15.82■□□□□ 0.12
PNKP-212ENST00000599454 WFDC3Q8IUB2 231 aa15.82■□□□□ 0.12
PNKP-212ENST00000599454 AIFM2Q9BRQ8 373 aa15.82■□□□□ 0.12
PNKP-212ENST00000599454 ELF5Q9UKW6 265 aaPredicted RBP15.82■□□□□ 0.12
PNKP-212ENST00000599454 IGLV11-55A0A075B6I3 123 aa15.81■□□□□ 0.12
PNKP-212ENST00000599454 IGKV1D-13A0A0B4J2D9 117 aa15.81■□□□□ 0.12
PNKP-212ENST00000599454 A0A1B0GW64 132 aa15.81■□□□□ 0.12
PNKP-212ENST00000599454 TRDV1A0A1B0GX56 115 aa15.81■□□□□ 0.12
PNKP-212ENST00000599454 SCGNO76038 276 aa15.81■□□□□ 0.12
PNKP-212ENST00000599454 SCAF4O95104 1147 aaKnown RBP15.81■□□□□ 0.12
PNKP-212ENST00000599454 IGKV1-13P0DP09 117 aa15.81■□□□□ 0.12
PNKP-212ENST00000599454 DEFA4P12838 97 aa15.81■□□□□ 0.12
PNKP-212ENST00000599454 MFSD4AQ8N468 514 aa15.81■□□□□ 0.12
PNKP-212ENST00000599454 OR4A5Q8NH83 315 aa15.81■□□□□ 0.12
PNKP-212ENST00000599454 NDUFB11Q9NX14 153 aa15.81■□□□□ 0.12
PNKP-212ENST00000599454 SPATA2Q9UM82 520 aa15.81■□□□□ 0.12
PNKP-212ENST00000599454 TP53TG1Q9Y2A0 90 aa15.81■□□□□ 0.12
PNKP-212ENST00000599454 CXorf65A6NEN9 183 aa15.8■□□□□ 0.12
PNKP-212ENST00000599454 LY6G6CO95867 125 aa15.8■□□□□ 0.12
PNKP-212ENST00000599454 C8orf88P0DMB2 117 aa15.8■□□□□ 0.12
PNKP-212ENST00000599454 ELLP55199 621 aaPredicted RBP15.8■□□□□ 0.12
PNKP-212ENST00000599454 TM4SF20Q53R12 229 aa15.8■□□□□ 0.12
PNKP-212ENST00000599454 BTNL8Q6UX41 500 aa15.8■□□□□ 0.12
PNKP-212ENST00000599454 RBPMS2Q6ZRY4 209 aaKnown RBP15.8■□□□□ 0.12
PNKP-212ENST00000599454 OR1L6Q8NGR2 347 aa15.8■□□□□ 0.12
PNKP-212ENST00000599454 BET1LQ9NYM9 111 aa15.8■□□□□ 0.12
PNKP-212ENST00000599454 MRPL27Q9P0M9 148 aaKnown RBP15.8■□□□□ 0.12
PNKP-212ENST00000599454 S4R3C0 116 aa15.8■□□□□ 0.12
PNKP-212ENST00000599454 CLEC3BP05452 202 aa15.79■□□□□ 0.12
PNKP-212ENST00000599454 HLA-GP17693 338 aa15.79■□□□□ 0.12
PNKP-212ENST00000599454 APOC4P55056 127 aa15.79■□□□□ 0.12
PNKP-212ENST00000599454 BRWD1-AS2P59051 145 aa15.79■□□□□ 0.12
PNKP-212ENST00000599454 MSMO1Q15800 293 aa15.79■□□□□ 0.12
PNKP-212ENST00000599454 Q6ZWC4 215 aa15.79■□□□□ 0.12
PNKP-212ENST00000599454 TAS2R8Q9NYW2 309 aa15.79■□□□□ 0.12
PNKP-212ENST00000599454 ANXA10Q9UJ72 324 aa15.79■□□□□ 0.12
PNKP-212ENST00000599454 UFC1Q9Y3C8 167 aa15.79■□□□□ 0.12
PNKP-212ENST00000599454 SELENOKQ9Y6D0 94 aa15.79■□□□□ 0.12
PNKP-212ENST00000599454 ATF4P18848 351 aaPredicted RBP15.78■□□□□ 0.12
PNKP-212ENST00000599454 BMI1P35226 326 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms