RNA–Protein interactions for RNA: ENST00000599165.5

LIG1-217, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-217ENST00000599165 ZNF429Q86V71 674 aa9.29□□□□□ -0.92
LIG1-217ENST00000599165 TMEM17Q86X19 198 aa9.29□□□□□ -0.92
LIG1-217ENST00000599165 SPAG16Q8N0X2 631 aa9.29□□□□□ -0.92
LIG1-217ENST00000599165 ZBTB34Q8NCN2 500 aa9.29□□□□□ -0.92
LIG1-217ENST00000599165 MOB3AQ96BX8 217 aa9.29□□□□□ -0.92
LIG1-217ENST00000599165 OR2A7Q96R45 310 aa9.29□□□□□ -0.92
LIG1-217ENST00000599165 PHB2Q99623 299 aa9.29□□□□□ -0.92
LIG1-217ENST00000599165 COA4Q9NYJ1 87 aa9.29□□□□□ -0.92
LIG1-217ENST00000599165 EHFQ9NZC4 300 aa9.29□□□□□ -0.92
LIG1-217ENST00000599165 TENM3Q9P273 2699 aa9.28□□□□□ -0.92
LIG1-217ENST00000599165 C13orf42A0A1B0GVH6 325 aa9.28□□□□□ -0.92
LIG1-217ENST00000599165 SAP30O75446 220 aa9.28□□□□□ -0.92
LIG1-217ENST00000599165 AREGP15514 252 aa9.28□□□□□ -0.92
LIG1-217ENST00000599165 CD40LGP29965 261 aa9.28□□□□□ -0.92
LIG1-217ENST00000599165 PRSS3P35030 304 aa9.28□□□□□ -0.92
LIG1-217ENST00000599165 RHOGP84095 191 aa9.28□□□□□ -0.92
LIG1-217ENST00000599165 KLK9Q2XQG4 91 aa9.28□□□□□ -0.92
LIG1-217ENST00000599165 OR4A47Q6IF82 309 aa9.28□□□□□ -0.92
LIG1-217ENST00000599165 SSX9Q7RTT3 188 aa9.28□□□□□ -0.92
LIG1-217ENST00000599165 CMTM3Q96MX0 182 aa9.28□□□□□ -0.92
LIG1-217ENST00000599165 FANCD2OSQ96PS1 177 aa9.28□□□□□ -0.92
LIG1-217ENST00000599165 RANGRFQ9HD47 186 aaPredicted RBP9.28□□□□□ -0.92
LIG1-217ENST00000599165 IFT46Q9NQC8 304 aa9.28□□□□□ -0.92
LIG1-217ENST00000599165 BET1LQ9NYM9 111 aa9.28□□□□□ -0.92
LIG1-217ENST00000599165 KLK9Q9UKQ9 250 aa9.28□□□□□ -0.92
LIG1-217ENST00000599165 A0A0G2JLM5 398 aa9.27□□□□□ -0.93
LIG1-217ENST00000599165 BMPR1BO00238 502 aa9.27□□□□□ -0.93
LIG1-217ENST00000599165 S1PR2O95136 353 aa9.27□□□□□ -0.93
LIG1-217ENST00000599165 IGLV1-51P01701 117 aa9.27□□□□□ -0.93
LIG1-217ENST00000599165 CRYGCP07315 174 aa9.27□□□□□ -0.93
LIG1-217ENST00000599165 HRH1P35367 487 aa9.27□□□□□ -0.93
LIG1-217ENST00000599165 KIR2DS2P43631 304 aa9.27□□□□□ -0.93
LIG1-217ENST00000599165 GPR107Q5VW38 600 aa9.27□□□□□ -0.93
LIG1-217ENST00000599165 OR51H1Q8NH63 302 aa9.27□□□□□ -0.93
LIG1-217ENST00000599165 USMG5Q96IX5 58 aa9.27□□□□□ -0.93
LIG1-217ENST00000599165 SPIN2AQ99865 258 aa9.27□□□□□ -0.93
LIG1-217ENST00000599165 SPIN2BQ9BPZ2 258 aa9.27□□□□□ -0.93
LIG1-217ENST00000599165 ZNF2Q9BSG1 426 aaPredicted RBP9.27□□□□□ -0.93
LIG1-217ENST00000599165 SLC2A9Q9NRM0 540 aa9.27□□□□□ -0.93
LIG1-217ENST00000599165 PEF1Q9UBV8 284 aaKnown RBP9.27□□□□□ -0.93
LIG1-217ENST00000599165 ZMAT5Q9UDW3 170 aaKnown RBP9.27□□□□□ -0.93
LIG1-217ENST00000599165 NPIPB5A8MRT5 1133 aa9.26□□□□□ -0.93
LIG1-217ENST00000599165 UPK2O00526 184 aa9.26□□□□□ -0.93
LIG1-217ENST00000599165 CREBL2O60519 120 aaPredicted RBP9.26□□□□□ -0.93
LIG1-217ENST00000599165 PGLYRP1O75594 196 aaPredicted RBP9.26□□□□□ -0.93
LIG1-217ENST00000599165 OR2J3O76001 311 aa9.26□□□□□ -0.93
LIG1-217ENST00000599165 ZP3P21754 424 aa9.26□□□□□ -0.93
LIG1-217ENST00000599165 HLA-DMAP28067 261 aa9.26□□□□□ -0.93
LIG1-217ENST00000599165 RPL27AP46776 148 aaKnown RBP9.26□□□□□ -0.93
LIG1-217ENST00000599165 RORCP51449 518 aa9.26□□□□□ -0.93
LIG1-217ENST00000599165 SYNJ2BPP57105 145 aa9.26□□□□□ -0.93
LIG1-217ENST00000599165 TAS2R31P59538 309 aa9.26□□□□□ -0.93
LIG1-217ENST00000599165 OR2B8PP59922 312 aa9.26□□□□□ -0.93
LIG1-217ENST00000599165 CD69Q07108 199 aa9.26□□□□□ -0.93
LIG1-217ENST00000599165 ZNF585BQ52M93 769 aa9.26□□□□□ -0.93
LIG1-217ENST00000599165 ADAMTSL5Q6ZMM2 481 aa9.26□□□□□ -0.93
LIG1-217ENST00000599165 SNX29P2Q8IUI4 249 aa9.26□□□□□ -0.93
LIG1-217ENST00000599165 OR5H2Q8NGV7 314 aa9.26□□□□□ -0.93
LIG1-217ENST00000599165 VSTM2AQ8TAG5 236 aa9.26□□□□□ -0.93
LIG1-217ENST00000599165 MIXL1Q9H2W2 232 aa9.26□□□□□ -0.93
LIG1-217ENST00000599165 ZNF257Q9Y2Q1 563 aa9.26□□□□□ -0.93
LIG1-217ENST00000599165 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.25□□□□□ -0.93
LIG1-217ENST00000599165 IGLC7A0M8Q6 106 aa9.25□□□□□ -0.93
LIG1-217ENST00000599165 FAM223BA6NKX1 122 aa9.25□□□□□ -0.93
LIG1-217ENST00000599165 MPPED1O15442 326 aa9.25□□□□□ -0.93
LIG1-217ENST00000599165 ACTL6BO94805 426 aa9.25□□□□□ -0.93
LIG1-217ENST00000599165 NDUFB8O95169 186 aa9.25□□□□□ -0.93
LIG1-217ENST00000599165 HPRT1P00492 218 aa9.25□□□□□ -0.93
LIG1-217ENST00000599165 HRASP01112 189 aa9.25□□□□□ -0.93
LIG1-217ENST00000599165 RLN1P04808 185 aa9.25□□□□□ -0.93
LIG1-217ENST00000599165 CSN3P07498 182 aa9.25□□□□□ -0.93
LIG1-217ENST00000599165 GP9P14770 177 aa9.25□□□□□ -0.93
LIG1-217ENST00000599165 CTRB1P17538 263 aa9.25□□□□□ -0.93
LIG1-217ENST00000599165 HLA-GP17693 338 aa9.25□□□□□ -0.93
LIG1-217ENST00000599165 MAS1LP35410 378 aa9.25□□□□□ -0.93
LIG1-217ENST00000599165 MECP2P51608 486 aaKnown RBP9.25□□□□□ -0.93
LIG1-217ENST00000599165 TAS2R46P59540 309 aa9.25□□□□□ -0.93
LIG1-217ENST00000599165 HERV-K104P61576 105 aa9.25□□□□□ -0.93
LIG1-217ENST00000599165 RPL8P62917 257 aaKnown RBP9.25□□□□□ -0.93
LIG1-217ENST00000599165 CATR1Q13166 79 aa9.25□□□□□ -0.93
LIG1-217ENST00000599165 EXOSC2Q13868 293 aaKnown RBP9.25□□□□□ -0.93
LIG1-217ENST00000599165 SPCS2Q15005 226 aa9.25□□□□□ -0.93
LIG1-217ENST00000599165 VAX1Q5SQQ9 334 aa9.25□□□□□ -0.93
LIG1-217ENST00000599165 AADACL3Q5VUY0 350 aa9.25□□□□□ -0.93
LIG1-217ENST00000599165 CTRB2Q6GPI1 263 aa9.25□□□□□ -0.93
LIG1-217ENST00000599165 FAM223AQ8IWN6 122 aa9.25□□□□□ -0.93
LIG1-217ENST00000599165 Q8N1Y9 231 aa9.25□□□□□ -0.93
LIG1-217ENST00000599165 OR9G4Q8NGQ1 327 aa9.25□□□□□ -0.93
LIG1-217ENST00000599165 CCDC140Q96MF4 163 aa9.25□□□□□ -0.93
LIG1-217ENST00000599165 FYTTD1Q96QD9 318 aaKnown RBP9.25□□□□□ -0.93
LIG1-217ENST00000599165 THAP7Q9BT49 309 aaPredicted RBP9.25□□□□□ -0.93
LIG1-217ENST00000599165 MRPS26Q9BYN8 205 aaKnown RBP9.25□□□□□ -0.93
LIG1-217ENST00000599165 PLEKHA2Q9HB19 425 aa9.25□□□□□ -0.93
LIG1-217ENST00000599165 SCPEP1Q9HB40 452 aa9.25□□□□□ -0.93
LIG1-217ENST00000599165 TMEM140Q9NV12 185 aa9.25□□□□□ -0.93
LIG1-217ENST00000599165 IGLV11-55A0A075B6I3 123 aa9.24□□□□□ -0.93
LIG1-217ENST00000599165 REG1AP05451 166 aa9.24□□□□□ -0.93
LIG1-217ENST00000599165 RPA2P15927 270 aa9.24□□□□□ -0.93
LIG1-217ENST00000599165 NQO2P16083 231 aa9.24□□□□□ -0.93
LIG1-217ENST00000599165 ZNF182P17025 639 aaPredicted RBP9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms