RNA–Protein interactions for RNA: ENST00000598471.1

UPF1-206, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 3

Gene UPF1, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-206ENST00000598471 UPK2O00526 184 aa12.39□□□□□ -0.43
UPF1-206ENST00000598471 NBR2O15453 112 aa12.39□□□□□ -0.43
UPF1-206ENST00000598471 ST8SIA3O43173 380 aa12.39□□□□□ -0.43
UPF1-206ENST00000598471 SLC25A17O43808 307 aa12.39□□□□□ -0.43
UPF1-206ENST00000598471 PITX3O75364 302 aa12.39□□□□□ -0.43
UPF1-206ENST00000598471 KBTBD11O94819 623 aa12.39□□□□□ -0.43
UPF1-206ENST00000598471 IGLV2-23P01705 113 aa12.39□□□□□ -0.43
UPF1-206ENST00000598471 OR9G9P0C7N8 305 aa12.39□□□□□ -0.43
UPF1-206ENST00000598471 PLGLAQ15195 96 aa12.39□□□□□ -0.43
UPF1-206ENST00000598471 PSG5Q15238 335 aa12.39□□□□□ -0.43
UPF1-206ENST00000598471 IZUMO4Q1ZYL8 232 aa12.39□□□□□ -0.43
UPF1-206ENST00000598471 LRRC37A5PQ49AS3 106 aa12.39□□□□□ -0.43
UPF1-206ENST00000598471 FAM120AOSQ5T036 256 aa12.39□□□□□ -0.43
UPF1-206ENST00000598471 Q6ZRM9 215 aa12.39□□□□□ -0.43
UPF1-206ENST00000598471 THAP6Q8TBB0 222 aa12.39□□□□□ -0.43
UPF1-206ENST00000598471 TMEM167AQ8TBQ9 72 aa12.39□□□□□ -0.43
UPF1-206ENST00000598471 FKBP11Q9NYL4 201 aa12.39□□□□□ -0.43
UPF1-206ENST00000598471 POMT1Q9Y6A1 747 aa12.39□□□□□ -0.43
UPF1-206ENST00000598471 FLNAP21333 2647 aaKnown RBP12.38□□□□□ -0.43
UPF1-206ENST00000598471 ABCA1O95477 2261 aa12.38□□□□□ -0.43
UPF1-206ENST00000598471 C15orf61A6NNL5 157 aa12.38□□□□□ -0.43
UPF1-206ENST00000598471 MED6O75586 246 aa12.38□□□□□ -0.43
UPF1-206ENST00000598471 C1QBP02746 253 aa12.38□□□□□ -0.43
UPF1-206ENST00000598471 HNRNPCP07910 306 aaKnown RBP eCLIP12.38□□□□□ -0.43
UPF1-206ENST00000598471 FGF2P09038 288 aa12.38□□□□□ -0.43
UPF1-206ENST00000598471 PVALBP20472 110 aaPredicted RBP12.38□□□□□ -0.43
UPF1-206ENST00000598471 CD24P25063 80 aa12.38□□□□□ -0.43
UPF1-206ENST00000598471 OR2B8PP59922 312 aa12.38□□□□□ -0.43
UPF1-206ENST00000598471 RELBQ01201 579 aa12.38□□□□□ -0.43
UPF1-206ENST00000598471 CD300CQ08708 224 aa12.38□□□□□ -0.43
UPF1-206ENST00000598471 IL15RAQ13261 267 aa12.38□□□□□ -0.43
UPF1-206ENST00000598471 SCGB2A2Q13296 93 aa12.38□□□□□ -0.43
UPF1-206ENST00000598471 RAB32Q13637 225 aa12.38□□□□□ -0.43
UPF1-206ENST00000598471 HNF4GQ14541 408 aa12.38□□□□□ -0.43
UPF1-206ENST00000598471 ZNF429Q86V71 674 aa12.38□□□□□ -0.43
UPF1-206ENST00000598471 WDR89Q96FK6 387 aaPredicted RBP12.38□□□□□ -0.43
UPF1-206ENST00000598471 SSX3Q99909 188 aa12.38□□□□□ -0.43
UPF1-206ENST00000598471 TMEM160Q9NX00 188 aa12.38□□□□□ -0.43
UPF1-206ENST00000598471 METTL1Q9UBP6 276 aaKnown RBP12.38□□□□□ -0.43
UPF1-206ENST00000598471 PITPNC1Q9UKF7 332 aa12.38□□□□□ -0.43
UPF1-206ENST00000598471 FOXA2Q9Y261 457 aaPredicted RBP12.38□□□□□ -0.43
UPF1-206ENST00000598471 LSM5Q9Y4Y9 91 aaKnown RBP12.38□□□□□ -0.43
UPF1-206ENST00000598471 SMLR1H3BR10 107 aa12.37□□□□□ -0.43
UPF1-206ENST00000598471 RRHO14718 337 aa12.37□□□□□ -0.43
UPF1-206ENST00000598471 ACTL6BO94805 426 aa12.37□□□□□ -0.43
UPF1-206ENST00000598471 MPC2O95563 127 aa12.37□□□□□ -0.43
UPF1-206ENST00000598471 LY6G6DO95868 133 aa12.37□□□□□ -0.43
UPF1-206ENST00000598471 IFNA17P01571 189 aa12.37□□□□□ -0.43
UPF1-206ENST00000598471 MBPP02686 304 aaPredicted RBP12.37□□□□□ -0.43
UPF1-206ENST00000598471 IL6RP08887 468 aaPredicted RBP12.37□□□□□ -0.43
UPF1-206ENST00000598471 RPL8P62917 257 aaKnown RBP12.37□□□□□ -0.43
UPF1-206ENST00000598471 DEFB112Q30KQ8 113 aa12.37□□□□□ -0.43
UPF1-206ENST00000598471 MMD2Q8IY49 270 aa12.37□□□□□ -0.43
UPF1-206ENST00000598471 Q8N6K4 173 aa12.37□□□□□ -0.43
UPF1-206ENST00000598471 NPBQ8NG41 125 aa12.37□□□□□ -0.43
UPF1-206ENST00000598471 ZDHHC16Q969W1 377 aa12.37□□□□□ -0.43
UPF1-206ENST00000598471 RITA1Q96K30 269 aa12.37□□□□□ -0.43
UPF1-206ENST00000598471 HSPB7Q9UBY9 170 aa12.37□□□□□ -0.43
UPF1-206ENST00000598471 NSG2Q9Y328 171 aa12.37□□□□□ -0.43
UPF1-206ENST00000598471 CELSR1Q9NYQ6 3014 aa12.36□□□□□ -0.43
UPF1-206ENST00000598471 TRAV3A0A0B4J244 114 aa12.36□□□□□ -0.43
UPF1-206ENST00000598471 BTBD17A6NE02 478 aa12.36□□□□□ -0.43
UPF1-206ENST00000598471 NCBP2LA6PVI3 153 aaKnown RBP12.36□□□□□ -0.43
UPF1-206ENST00000598471 K7EPK0 472 aa12.36□□□□□ -0.43
UPF1-206ENST00000598471 L7N2F9 121 aa12.36□□□□□ -0.43
UPF1-206ENST00000598471 NXPH3O95157 252 aa12.36□□□□□ -0.43
UPF1-206ENST00000598471 NDUFA3O95167 84 aa12.36□□□□□ -0.43
UPF1-206ENST00000598471 CNTFRP26992 372 aa12.36□□□□□ -0.43
UPF1-206ENST00000598471 MAS1LP35410 378 aa12.36□□□□□ -0.43
UPF1-206ENST00000598471 SPCS3P61009 180 aa12.36□□□□□ -0.43
UPF1-206ENST00000598471 VAMP2P63027 116 aa12.36□□□□□ -0.43
UPF1-206ENST00000598471 ID3Q02535 119 aa12.36□□□□□ -0.43
UPF1-206ENST00000598471 TNFRSF9Q07011 255 aa12.36□□□□□ -0.43
UPF1-206ENST00000598471 AARDQ4LEZ3 155 aa12.36□□□□□ -0.43
UPF1-206ENST00000598471 CXorf66Q5JRM2 361 aaPredicted RBP12.36□□□□□ -0.43
UPF1-206ENST00000598471 C11orf87Q6NUJ2 197 aa12.36□□□□□ -0.43
UPF1-206ENST00000598471 PRSS54Q6PEW0 395 aa12.36□□□□□ -0.43
UPF1-206ENST00000598471 BCL6BQ8N143 479 aaPredicted RBP12.36□□□□□ -0.43
UPF1-206ENST00000598471 FAM71E2Q8N5Q1 922 aa12.36□□□□□ -0.43
UPF1-206ENST00000598471 OR5B3Q8NH48 314 aa12.36□□□□□ -0.43
UPF1-206ENST00000598471 OR52E5Q8NH55 327 aa12.36□□□□□ -0.43
UPF1-206ENST00000598471 OR5R1Q8NH85 324 aa12.36□□□□□ -0.43
UPF1-206ENST00000598471 RBMXL1Q96E39 390 aaKnown RBP12.36□□□□□ -0.43
UPF1-206ENST00000598471 HYLS1Q96M11 299 aa12.36□□□□□ -0.43
UPF1-206ENST00000598471 CLCC1Q96S66 551 aa12.36□□□□□ -0.43
UPF1-206ENST00000598471 QTRT1Q9BXR0 403 aaKnown RBP12.36□□□□□ -0.43
UPF1-206ENST00000598471 COMMD5Q9GZQ3 224 aa12.36□□□□□ -0.43
UPF1-206ENST00000598471 FBXL15Q9H469 300 aa12.36□□□□□ -0.43
UPF1-206ENST00000598471 TMEM14BQ9NUH8 114 aa12.36□□□□□ -0.43
UPF1-206ENST00000598471 SIGLEC9Q9Y336 463 aa12.36□□□□□ -0.43
UPF1-206ENST00000598471 OR51B2Q9Y5P1 312 aa12.36□□□□□ -0.43
UPF1-206ENST00000598471 HIVEP1P15822 2718 aa12.36□□□□□ -0.43
UPF1-206ENST00000598471 F8P00451 2351 aa12.35□□□□□ -0.43
UPF1-206ENST00000598471 ACANP16112 2415 aa12.35□□□□□ -0.43
UPF1-206ENST00000598471 FXYD6-FXYD2A0A087WZ82 144 aa12.35□□□□□ -0.43
UPF1-206ENST00000598471 TRAV14DV4A0A0A6YYC5 116 aa12.35□□□□□ -0.43
UPF1-206ENST00000598471 CEBPZOSA8MTT3 80 aa12.35□□□□□ -0.43
UPF1-206ENST00000598471 H3BUX3 64 aa12.35□□□□□ -0.43
UPF1-206ENST00000598471 SYNGR2O43760 224 aa12.35□□□□□ -0.43
UPF1-206ENST00000598471 DEDDO75618 318 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms