RNA–Protein interactions for RNA: ENST00000597928.5

USHBP1-207, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 2

Gene USHBP1, Length 3,598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-207ENST00000597928 FAM90A12PA8MX19 464 aa10.36□□□□□ -0.75
USHBP1-207ENST00000597928 FAM90A5PA8MXJ8 464 aa10.36□□□□□ -0.75
USHBP1-207ENST00000597928 FAM90A23PA8MXZ1 464 aa10.36□□□□□ -0.75
USHBP1-207ENST00000597928 FAM90A15PP0C7V4 464 aa10.36□□□□□ -0.75
USHBP1-207ENST00000597928 FAM90A13PP0C7W8 464 aa10.36□□□□□ -0.75
USHBP1-207ENST00000597928 FAM90A14PP0C7W9 464 aa10.36□□□□□ -0.75
USHBP1-207ENST00000597928 FAM90A24PP0C7X0 464 aa10.36□□□□□ -0.75
USHBP1-207ENST00000597928 RPL23P62829 140 aaKnown RBP10.36□□□□□ -0.75
USHBP1-207ENST00000597928 FAM90A2PQ658T7 463 aa10.36□□□□□ -0.75
USHBP1-207ENST00000597928 SAXO1Q8IYX7 474 aa10.36□□□□□ -0.75
USHBP1-207ENST00000597928 CISD2Q8N5K1 135 aaKnown RBP10.36□□□□□ -0.75
USHBP1-207ENST00000597928 DDA1Q9BW61 102 aa10.36□□□□□ -0.75
USHBP1-207ENST00000597928 DECR2Q9NUI1 292 aa10.36□□□□□ -0.75
USHBP1-207ENST00000597928 RYDENQ9NUL5 291 aaKnown RBP10.36□□□□□ -0.75
USHBP1-207ENST00000597928 TMEM140Q9NV12 185 aa10.36□□□□□ -0.75
USHBP1-207ENST00000597928 CPAMD8Q8IZJ3 1885 aa10.36□□□□□ -0.75
USHBP1-207ENST00000597928 SCO2A0A1W2PP80 73 aa10.36□□□□□ -0.75
USHBP1-207ENST00000597928 HOXA5P20719 270 aa10.36□□□□□ -0.75
USHBP1-207ENST00000597928 CBLN1P23435 193 aa10.36□□□□□ -0.75
USHBP1-207ENST00000597928 SUMO1P63165 101 aaKnown RBP10.36□□□□□ -0.75
USHBP1-207ENST00000597928 DAZAP2Q15038 168 aaPredicted RBP10.36□□□□□ -0.75
USHBP1-207ENST00000597928 UTF1Q5T230 341 aa10.36□□□□□ -0.75
USHBP1-207ENST00000597928 TOMM20LQ6UXN7 152 aa10.36□□□□□ -0.75
USHBP1-207ENST00000597928 OR10X1Q8NGY0 326 aa10.36□□□□□ -0.75
USHBP1-207ENST00000597928 CIB3Q96Q77 187 aaPredicted RBP10.36□□□□□ -0.75
USHBP1-207ENST00000597928 CACNA1AO00555 2505 aa10.36□□□□□ -0.75
USHBP1-207ENST00000597928 TRGV10A0A0A0MS01 117 aa10.35□□□□□ -0.75
USHBP1-207ENST00000597928 SERF2P84101 59 aa10.35□□□□□ -0.75
USHBP1-207ENST00000597928 ODF3L1Q8IXM7 274 aa10.35□□□□□ -0.75
USHBP1-207ENST00000597928 KIR3DL3Q8N743 410 aa10.35□□□□□ -0.75
USHBP1-207ENST00000597928 MS4A5Q9H3V2 200 aa10.35□□□□□ -0.75
USHBP1-207ENST00000597928 ANKHD1Q8IWZ3 2542 aaKnown RBP10.35□□□□□ -0.75
USHBP1-207ENST00000597928 WT1P19544 449 aaPredicted RBP10.35□□□□□ -0.75
USHBP1-207ENST00000597928 DOLPP1Q86YN1 238 aa10.35□□□□□ -0.75
USHBP1-207ENST00000597928 CD177Q8N6Q3 437 aa10.35□□□□□ -0.75
USHBP1-207ENST00000597928 CISD1Q9NZ45 108 aaKnown RBP10.35□□□□□ -0.75
USHBP1-207ENST00000597928 FCN1O00602 326 aa10.35□□□□□ -0.75
USHBP1-207ENST00000597928 ORM2P19652 201 aa10.35□□□□□ -0.75
USHBP1-207ENST00000597928 PAX6P26367 422 aa10.35□□□□□ -0.75
USHBP1-207ENST00000597928 CAMPP49913 170 aa10.35□□□□□ -0.75
USHBP1-207ENST00000597928 CD81P60033 236 aa10.35□□□□□ -0.75
USHBP1-207ENST00000597928 RPP30P78346 268 aaKnown RBP10.35□□□□□ -0.75
USHBP1-207ENST00000597928 INO80CQ6PI98 192 aaPredicted RBP10.35□□□□□ -0.75
USHBP1-207ENST00000597928 Q6ZT83 130 aa10.35□□□□□ -0.75
USHBP1-207ENST00000597928 SSBP3Q9BWW4 388 aaPredicted RBP10.35□□□□□ -0.75
USHBP1-207ENST00000597928 COMMD5Q9GZQ3 224 aa10.35□□□□□ -0.75
USHBP1-207ENST00000597928 HCP5Q6MZN7 132 aa10.34□□□□□ -0.75
USHBP1-207ENST00000597928 PAM16Q9Y3D7 125 aa10.34□□□□□ -0.75
USHBP1-207ENST00000597928 FOXH1O75593 365 aa10.34□□□□□ -0.75
USHBP1-207ENST00000597928 COX5BP10606 129 aa10.34□□□□□ -0.75
USHBP1-207ENST00000597928 KIR2DL2P43627 348 aaPredicted RBP10.34□□□□□ -0.75
USHBP1-207ENST00000597928 RBMXL3Q8N7X1 1067 aaKnown RBP10.34□□□□□ -0.75
USHBP1-207ENST00000597928 KLF2Q9Y5W3 355 aaPredicted RBP10.34□□□□□ -0.75
USHBP1-207ENST00000597928 DUXBA0A1W2PPF3 345 aa10.34□□□□□ -0.75
USHBP1-207ENST00000597928 A8MXE2 369 aa10.34□□□□□ -0.75
USHBP1-207ENST00000597928 TNFSF4P23510 183 aa10.34□□□□□ -0.75
USHBP1-207ENST00000597928 NPY1RP25929 384 aa10.34□□□□□ -0.75
USHBP1-207ENST00000597928 CHRNB4P30926 498 aa10.34□□□□□ -0.75
USHBP1-207ENST00000597928 LSM10Q969L4 123 aaKnown RBP10.34□□□□□ -0.75
USHBP1-207ENST00000597928 MS4A10Q96PG2 267 aa10.34□□□□□ -0.75
USHBP1-207ENST00000597928 KALRNO60229 2985 aa10.33□□□□□ -0.76
USHBP1-207ENST00000597928 DMXL1Q9Y485 3027 aa10.33□□□□□ -0.76
USHBP1-207ENST00000597928 IGHV2OR16-5A0A0B4J2B6 119 aa10.33□□□□□ -0.76
USHBP1-207ENST00000597928 CGAP01215 116 aa10.33□□□□□ -0.76
USHBP1-207ENST00000597928 MBP02144 154 aa10.33□□□□□ -0.76
USHBP1-207ENST00000597928 CYC1P08574 325 aa10.33□□□□□ -0.76
USHBP1-207ENST00000597928 CCL3L1P16619 93 aa10.33□□□□□ -0.76
USHBP1-207ENST00000597928 IGFBP2P18065 325 aa10.33□□□□□ -0.76
USHBP1-207ENST00000597928 COX7A1P24310 79 aa10.33□□□□□ -0.76
USHBP1-207ENST00000597928 CRYBB3P26998 211 aa10.33□□□□□ -0.76
USHBP1-207ENST00000597928 PNRC1Q12796 327 aaPredicted RBP10.33□□□□□ -0.76
USHBP1-207ENST00000597928 PEAR1Q5VY43 1037 aaPredicted RBP10.33□□□□□ -0.76
USHBP1-207ENST00000597928 SLC35D1Q9NTN3 355 aa10.33□□□□□ -0.76
USHBP1-207ENST00000597928 CALYQ9NYX4 217 aa10.33□□□□□ -0.76
USHBP1-207ENST00000597928 NAT8BQ9UHF3 227 aa10.33□□□□□ -0.76
USHBP1-207ENST00000597928 TCF19Q9Y242 345 aa10.33□□□□□ -0.76
USHBP1-207ENST00000597928 J3QR06 171 aa10.33□□□□□ -0.76
USHBP1-207ENST00000597928 CA1P00915 261 aaPredicted RBP10.33□□□□□ -0.76
USHBP1-207ENST00000597928 TMEM11P17152 192 aa10.33□□□□□ -0.76
USHBP1-207ENST00000597928 OPRK1P41145 380 aa10.33□□□□□ -0.76
USHBP1-207ENST00000597928 UNQ6494/PRO21346Q6UXR6 183 aa10.33□□□□□ -0.76
USHBP1-207ENST00000597928 MISP3Q96FF7 219 aa10.33□□□□□ -0.76
USHBP1-207ENST00000597928 SIRT7Q9NRC8 400 aa10.33□□□□□ -0.76
USHBP1-207ENST00000597928 CLCF1Q9UBD9 225 aa10.33□□□□□ -0.76
USHBP1-207ENST00000597928 PIGBOS1A0A0B4J2F0 54 aa10.32□□□□□ -0.76
USHBP1-207ENST00000597928 KBTBD11O94819 623 aa10.32□□□□□ -0.76
USHBP1-207ENST00000597928 OR10W1Q8NGF6 305 aa10.32□□□□□ -0.76
USHBP1-207ENST00000597928 BTF3L4Q96K17 158 aa10.32□□□□□ -0.76
USHBP1-207ENST00000597928 CBLN4Q9NTU7 201 aa10.32□□□□□ -0.76
USHBP1-207ENST00000597928 OR6C3Q9NZP0 311 aa10.32□□□□□ -0.76
USHBP1-207ENST00000597928 S4R3C0 116 aa10.32□□□□□ -0.76
USHBP1-207ENST00000597928 NAV3Q8IVL0 2385 aa10.32□□□□□ -0.76
USHBP1-207ENST00000597928 OR10J1P30954 320 aa10.32□□□□□ -0.76
USHBP1-207ENST00000597928 TCTAP57738 103 aa10.32□□□□□ -0.76
USHBP1-207ENST00000597928 C10orf55Q5SWW7 151 aa10.32□□□□□ -0.76
USHBP1-207ENST00000597928 OR8I2Q8N0Y5 310 aa10.32□□□□□ -0.76
USHBP1-207ENST00000597928 ATOH7Q8N100 152 aa10.32□□□□□ -0.76
USHBP1-207ENST00000597928 TMEM18Q96B42 140 aa10.32□□□□□ -0.76
USHBP1-207ENST00000597928 IGHV1-18A0A0C4DH31 117 aa10.32□□□□□ -0.76
USHBP1-207ENST00000597928 MT-CO2P00403 227 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms