RNA–Protein interactions for RNA: ENST00000597811.5

XRCC1-206, Transcript of X-ray repair cross complementing 1, humanhuman

TSL 5

Gene XRCC1, Length 809 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-206ENST00000597811 DNAH9Q9NYC9 4486 aa12.05□□□□□ -0.48
XRCC1-206ENST00000597811 MSGN1A6NI15 193 aa12.04□□□□□ -0.48
XRCC1-206ENST00000597811 DISC1C4P0D8 188 aa12.04□□□□□ -0.48
XRCC1-206ENST00000597811 AKAIN1P0CW23 69 aa12.04□□□□□ -0.48
XRCC1-206ENST00000597811 RPA2P15927 270 aa12.04□□□□□ -0.48
XRCC1-206ENST00000597811 RAB9AP51151 201 aa12.04□□□□□ -0.48
XRCC1-206ENST00000597811 ERVK-16P61578 105 aa12.04□□□□□ -0.48
XRCC1-206ENST00000597811 MEF2DQ14814 521 aa12.04□□□□□ -0.48
XRCC1-206ENST00000597811 FAAP20Q6NZ36 180 aa12.04□□□□□ -0.48
XRCC1-206ENST00000597811 MINDY2Q8NBR6 621 aa12.04□□□□□ -0.48
XRCC1-206ENST00000597811 OR4D10Q8NGI6 311 aa12.04□□□□□ -0.48
XRCC1-206ENST00000597811 OR5M8Q8NGP6 311 aa12.04□□□□□ -0.48
XRCC1-206ENST00000597811 SRSF12Q8WXF0 261 aaKnown RBP12.04□□□□□ -0.48
XRCC1-206ENST00000597811 DUX3Q96PT4 197 aa12.04□□□□□ -0.48
XRCC1-206ENST00000597811 RSRP1Q9BUV0 290 aa12.04□□□□□ -0.48
XRCC1-206ENST00000597811 KLK15Q9H2R5 256 aa12.04□□□□□ -0.48
XRCC1-206ENST00000597811 AURKAIP1Q9NWT8 199 aaPredicted RBP12.04□□□□□ -0.48
XRCC1-206ENST00000597811 COL7A1Q02388 2944 aa12.04□□□□□ -0.48
XRCC1-206ENST00000597811 DPPA5A6NC42 116 aa12.03□□□□□ -0.48
XRCC1-206ENST00000597811 RBFOX2O43251 390 aaKnown RBP eCLIP12.03□□□□□ -0.48
XRCC1-206ENST00000597811 KBTBD11O94819 623 aa12.03□□□□□ -0.48
XRCC1-206ENST00000597811 S1PR2O95136 353 aa12.03□□□□□ -0.48
XRCC1-206ENST00000597811 IGLV1-40P01703 118 aa12.03□□□□□ -0.48
XRCC1-206ENST00000597811 NQO2P16083 231 aa12.03□□□□□ -0.48
XRCC1-206ENST00000597811 F2RP25116 425 aa12.03□□□□□ -0.48
XRCC1-206ENST00000597811 SLC6A1P30531 599 aa12.03□□□□□ -0.48
XRCC1-206ENST00000597811 LPAR6P43657 344 aa12.03□□□□□ -0.48
XRCC1-206ENST00000597811 CDX1P47902 265 aaPredicted RBP12.03□□□□□ -0.48
XRCC1-206ENST00000597811 CRIP2P52943 208 aaPredicted RBP12.03□□□□□ -0.48
XRCC1-206ENST00000597811 UCP3P55916 312 aa12.03□□□□□ -0.48
XRCC1-206ENST00000597811 BRWD1-AS2P59051 145 aa12.03□□□□□ -0.48
XRCC1-206ENST00000597811 TPPP2P59282 170 aa12.03□□□□□ -0.48
XRCC1-206ENST00000597811 TAS2R31P59538 309 aa12.03□□□□□ -0.48
XRCC1-206ENST00000597811 DEFB136Q30KP8 78 aa12.03□□□□□ -0.48
XRCC1-206ENST00000597811 TBC1D26Q86UD7 250 aa12.03□□□□□ -0.48
XRCC1-206ENST00000597811 LINC00482Q8N8I6 264 aa12.03□□□□□ -0.48
XRCC1-206ENST00000597811 FYTTD1Q96QD9 318 aaKnown RBP12.03□□□□□ -0.48
XRCC1-206ENST00000597811 COA4Q9NYJ1 87 aa12.03□□□□□ -0.48
XRCC1-206ENST00000597811 VSIG4Q9Y279 399 aa12.03□□□□□ -0.48
XRCC1-206ENST00000597811 GSTZ1O43708 216 aaPredicted RBP12.02□□□□□ -0.49
XRCC1-206ENST00000597811 SOX15O60248 233 aa12.02□□□□□ -0.49
XRCC1-206ENST00000597811 TRGV3P03979 118 aa12.02□□□□□ -0.49
XRCC1-206ENST00000597811 CD74P04233 296 aa12.02□□□□□ -0.49
XRCC1-206ENST00000597811 PI3P19957 117 aa12.02□□□□□ -0.49
XRCC1-206ENST00000597811 SPANXN2Q5MJ10 180 aa12.02□□□□□ -0.49
XRCC1-206ENST00000597811 OR4A47Q6IF82 309 aa12.02□□□□□ -0.49
XRCC1-206ENST00000597811 RNF152Q8N8N0 203 aa12.02□□□□□ -0.49
XRCC1-206ENST00000597811 TERB2Q8NHR7 220 aa12.02□□□□□ -0.49
XRCC1-206ENST00000597811 ZFAND1Q8TCF1 268 aa12.02□□□□□ -0.49
XRCC1-206ENST00000597811 MRAPQ8TCY5 172 aa12.02□□□□□ -0.49
XRCC1-206ENST00000597811 C4orf3Q8WVX3 66 aa12.02□□□□□ -0.49
XRCC1-206ENST00000597811 RCC1LQ96I51 464 aaKnown RBP12.02□□□□□ -0.49
XRCC1-206ENST00000597811 UBE2E2Q96LR5 201 aa12.02□□□□□ -0.49
XRCC1-206ENST00000597811 TMEM68Q96MH6 324 aa12.02□□□□□ -0.49
XRCC1-206ENST00000597811 SPIN2AQ99865 258 aa12.02□□□□□ -0.49
XRCC1-206ENST00000597811 SPIN2BQ9BPZ2 258 aa12.02□□□□□ -0.49
XRCC1-206ENST00000597811 THAP7Q9BT49 309 aaPredicted RBP12.02□□□□□ -0.49
XRCC1-206ENST00000597811 PLEKHA2Q9HB19 425 aa12.02□□□□□ -0.49
XRCC1-206ENST00000597811 MCUBQ9NWR8 336 aa12.02□□□□□ -0.49
XRCC1-206ENST00000597811 CCL24O00175 119 aa12.01□□□□□ -0.49
XRCC1-206ENST00000597811 KRASP01116 189 aa12.01□□□□□ -0.49
XRCC1-206ENST00000597811 MYCNOSP40205 109 aa12.01□□□□□ -0.49
XRCC1-206ENST00000597811 RPL27AP46776 148 aaKnown RBP12.01□□□□□ -0.49
XRCC1-206ENST00000597811 RPL8P62917 257 aaKnown RBP12.01□□□□□ -0.49
XRCC1-206ENST00000597811 SSBP2P81877 361 aaPredicted RBP12.01□□□□□ -0.49
XRCC1-206ENST00000597811 C10orf55Q5SWW7 151 aa12.01□□□□□ -0.49
XRCC1-206ENST00000597811 MRPL41Q8IXM3 137 aaKnown RBP12.01□□□□□ -0.49
XRCC1-206ENST00000597811 PUSL1Q8N0Z8 303 aaKnown RBP12.01□□□□□ -0.49
XRCC1-206ENST00000597811 Q8N402 240 aa12.01□□□□□ -0.49
XRCC1-206ENST00000597811 ZNF491Q8N8L2 437 aa12.01□□□□□ -0.49
XRCC1-206ENST00000597811 OR4C16Q8NGL9 310 aa12.01□□□□□ -0.49
XRCC1-206ENST00000597811 OR4A5Q8NH83 315 aa12.01□□□□□ -0.49
XRCC1-206ENST00000597811 TMEM167AQ8TBQ9 72 aa12.01□□□□□ -0.49
XRCC1-206ENST00000597811 MARCH1Q8TCQ1 289 aa12.01□□□□□ -0.49
XRCC1-206ENST00000597811 DPF1Q92782 380 aa12.01□□□□□ -0.49
XRCC1-206ENST00000597811 SLA2Q9H6Q3 261 aa12.01□□□□□ -0.49
XRCC1-206ENST00000597811 GNB4Q9HAV0 340 aa12.01□□□□□ -0.49
XRCC1-206ENST00000597811 SLC2A9Q9NRM0 540 aa12.01□□□□□ -0.49
XRCC1-206ENST00000597811 COMMD9Q9P000 198 aa12.01□□□□□ -0.49
XRCC1-206ENST00000597811 COPZ2Q9P299 210 aa12.01□□□□□ -0.49
XRCC1-206ENST00000597811 C14orf166Q9Y224 244 aaKnown RBP12.01□□□□□ -0.49
XRCC1-206ENST00000597811 C13orf42A0A1B0GVH6 325 aa12□□□□□ -0.49
XRCC1-206ENST00000597811 IGHV3-11P01762 117 aa12□□□□□ -0.49
XRCC1-206ENST00000597811 SERPINE2P07093 398 aa12□□□□□ -0.49
XRCC1-206ENST00000597811 MAS1LP35410 378 aa12□□□□□ -0.49
XRCC1-206ENST00000597811 G6PCP35575 357 aa12□□□□□ -0.49
XRCC1-206ENST00000597811 INPP1P49441 399 aa12□□□□□ -0.49
XRCC1-206ENST00000597811 PIGPP57054 158 aa12□□□□□ -0.49
XRCC1-206ENST00000597811 MRGPRG-AS1Q2M3A8 158 aa12□□□□□ -0.49
XRCC1-206ENST00000597811 C19orf54Q5BKX5 351 aa12□□□□□ -0.49
XRCC1-206ENST00000597811 LHFPL1Q86WI0 220 aa12□□□□□ -0.49
XRCC1-206ENST00000597811 CCDC71LQ8N9Z2 235 aa12□□□□□ -0.49
XRCC1-206ENST00000597811 OR11H1Q8NG94 326 aa12□□□□□ -0.49
XRCC1-206ENST00000597811 ZNF486Q96H40 463 aaPredicted RBP12□□□□□ -0.49
XRCC1-206ENST00000597811 RAX2Q96IS3 184 aa12□□□□□ -0.49
XRCC1-206ENST00000597811 COMMD5Q9GZQ3 224 aa12□□□□□ -0.49
XRCC1-206ENST00000597811 TMEM140Q9NV12 185 aa12□□□□□ -0.49
XRCC1-206ENST00000597811 BET1LQ9NYM9 111 aa12□□□□□ -0.49
XRCC1-206ENST00000597811 ANKRD20A5PA0PJZ0 165 aa11.99□□□□□ -0.49
XRCC1-206ENST00000597811 HMX3A6NHT5 357 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms