RNA–Protein interactions for RNA: ENST00000597776.1

LSM4-205, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, human

TSL 2

Gene LSM4, Length 446 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LSM4-205	ENST00000597776	OR11H12	B2RN74	326 aa		7.93	□□□□□ -1.14
LSM4-205	ENST00000597776	SSX5	O60225	188 aa		7.93	□□□□□ -1.14
LSM4-205	ENST00000597776	KBTBD11	O94819	623 aa		7.93	□□□□□ -1.14
LSM4-205	ENST00000597776	NDUFB8	O95169	186 aa		7.93	□□□□□ -1.14
LSM4-205	ENST00000597776	IL6R	P08887	468 aa	Predicted RBP	7.93	□□□□□ -1.14
LSM4-205	ENST00000597776	MYOD1	P15172	320 aa		7.93	□□□□□ -1.14
LSM4-205	ENST00000597776	AREG	P15514	252 aa		7.93	□□□□□ -1.14
LSM4-205	ENST00000597776	CD36	P16671	472 aa		7.93	□□□□□ -1.14
LSM4-205	ENST00000597776	RPL27A	P46776	148 aa	Known RBP	7.93	□□□□□ -1.14
LSM4-205	ENST00000597776	BRWD1-AS2	P59051	145 aa		7.93	□□□□□ -1.14
LSM4-205	ENST00000597776	EIF4EBP1	Q13541	118 aa	Predicted RBP	7.93	□□□□□ -1.14
LSM4-205	ENST00000597776	SLC25A42	Q86VD7	318 aa		7.93	□□□□□ -1.14
LSM4-205	ENST00000597776	LAX1	Q8IWV1	398 aa		7.93	□□□□□ -1.14
LSM4-205	ENST00000597776	OR4S2	Q8NH73	311 aa		7.93	□□□□□ -1.14
LSM4-205	ENST00000597776	KCTD12	Q96CX2	325 aa	Known RBP	7.93	□□□□□ -1.14
LSM4-205	ENST00000597776	CCDC140	Q96MF4	163 aa		7.93	□□□□□ -1.14
LSM4-205	ENST00000597776	OR2A7	Q96R45	310 aa		7.93	□□□□□ -1.14
LSM4-205	ENST00000597776	CENPO	Q9BU64	300 aa		7.93	□□□□□ -1.14
LSM4-205	ENST00000597776	OR51E2	Q9H255	320 aa		7.93	□□□□□ -1.14
LSM4-205	ENST00000597776	SLC2A8	Q9NY64	477 aa		7.93	□□□□□ -1.14
LSM4-205	ENST00000597776	TAS2R8	Q9NYW2	309 aa		7.93	□□□□□ -1.14
LSM4-205	ENST00000597776	ALMS1	Q8TCU4	4167 aa		7.93	□□□□□ -1.14
LSM4-205	ENST00000597776	DPPA5	A6NC42	116 aa		7.92	□□□□□ -1.14
LSM4-205	ENST00000597776	NPIPB5	A8MRT5	1133 aa		7.92	□□□□□ -1.14
LSM4-205	ENST00000597776	GGCT	O75223	188 aa	Known RBP	7.92	□□□□□ -1.14
LSM4-205	ENST00000597776	REG1A	P05451	166 aa		7.92	□□□□□ -1.14
LSM4-205	ENST00000597776	CTXN2	P0C2S0	81 aa		7.92	□□□□□ -1.14
LSM4-205	ENST00000597776	KIR2DS2	P43631	304 aa		7.92	□□□□□ -1.14
LSM4-205	ENST00000597776	GNG2	P59768	71 aa		7.92	□□□□□ -1.14
LSM4-205	ENST00000597776	ARL6IP1	Q15041	203 aa		7.92	□□□□□ -1.14
LSM4-205	ENST00000597776	CNIH2	Q6PI25	160 aa		7.92	□□□□□ -1.14
LSM4-205	ENST00000597776	CLEC19A	Q6UXS0	136 aa		7.92	□□□□□ -1.14
LSM4-205	ENST00000597776	SSX9	Q7RTT3	188 aa		7.92	□□□□□ -1.14
LSM4-205	ENST00000597776	PUSL1	Q8N0Z8	303 aa	Known RBP	7.92	□□□□□ -1.14
LSM4-205	ENST00000597776	TMEM167A	Q8TBQ9	72 aa		7.92	□□□□□ -1.14
LSM4-205	ENST00000597776	FANCD2OS	Q96PS1	177 aa		7.92	□□□□□ -1.14
LSM4-205	ENST00000597776	HSD17B10	Q99714	261 aa	Known RBP	7.92	□□□□□ -1.14
LSM4-205	ENST00000597776	ZC4H2	Q9NQZ6	224 aa		7.92	□□□□□ -1.14
LSM4-205	ENST00000597776	SLC2A9	Q9NRM0	540 aa		7.92	□□□□□ -1.14
LSM4-205	ENST00000597776	DAPK2	Q9UIK4	370 aa		7.92	□□□□□ -1.14
LSM4-205	ENST00000597776	BLOC1S6	Q9UL45	172 aa		7.92	□□□□□ -1.14
LSM4-205	ENST00000597776	TMEM213	A2RRL7	107 aa		7.91	□□□□□ -1.14
LSM4-205	ENST00000597776	ERICH4	A6NGS2	130 aa		7.91	□□□□□ -1.14
LSM4-205	ENST00000597776	NOTO	A8MTQ0	251 aa		7.91	□□□□□ -1.14
LSM4-205	ENST00000597776	LGALS9	O00182	355 aa		7.91	□□□□□ -1.14
LSM4-205	ENST00000597776	TNFSF12	O43508	249 aa		7.91	□□□□□ -1.14
LSM4-205	ENST00000597776	SLC22A5	O76082	557 aa		7.91	□□□□□ -1.14
LSM4-205	ENST00000597776	JTB	O76095	146 aa		7.91	□□□□□ -1.14
LSM4-205	ENST00000597776	ZNF735	P0CB33	412 aa		7.91	□□□□□ -1.14
LSM4-205	ENST00000597776	PTHLH	P12272	177 aa		7.91	□□□□□ -1.14
LSM4-205	ENST00000597776	GAL	P22466	123 aa		7.91	□□□□□ -1.14
LSM4-205	ENST00000597776	CBLN1	P23435	193 aa		7.91	□□□□□ -1.14
LSM4-205	ENST00000597776	ARL3	P36405	182 aa		7.91	□□□□□ -1.14
LSM4-205	ENST00000597776	TMEM61	Q8N0U2	210 aa		7.91	□□□□□ -1.14
LSM4-205	ENST00000597776	MFSD4A	Q8N468	514 aa		7.91	□□□□□ -1.14
LSM4-205	ENST00000597776	VSTM2A	Q8TAG5	236 aa		7.91	□□□□□ -1.14
LSM4-205	ENST00000597776	LGALS14	Q8TCE9	139 aa		7.91	□□□□□ -1.14
LSM4-205	ENST00000597776	DCSTAMP	Q9H295	470 aa		7.91	□□□□□ -1.14
LSM4-205	ENST00000597776	TXNL4B	Q9NX01	149 aa	Known RBP	7.91	□□□□□ -1.14
LSM4-205	ENST00000597776	TECR	Q9NZ01	308 aa	Known RBP	7.91	□□□□□ -1.14
LSM4-205	ENST00000597776	MLX	Q9UH92	298 aa		7.91	□□□□□ -1.14
LSM4-205	ENST00000597776	ANXA10	Q9UJ72	324 aa		7.91	□□□□□ -1.14
LSM4-205	ENST00000597776	ZNF320	A2RRD8	509 aa		7.9	□□□□□ -1.14
LSM4-205	ENST00000597776	MFSD2B	A6NFX1	497 aa		7.9	□□□□□ -1.14
LSM4-205	ENST00000597776	CGB1	A6NKQ9	187 aa		7.9	□□□□□ -1.14
LSM4-205	ENST00000597776	SCAF4	O95104	1147 aa	Known RBP	7.9	□□□□□ -1.14
LSM4-205	ENST00000597776	FCER2	P06734	321 aa		7.9	□□□□□ -1.14
LSM4-205	ENST00000597776	CRYGC	P07315	174 aa		7.9	□□□□□ -1.14
LSM4-205	ENST00000597776	PSMB9	P28065	219 aa		7.9	□□□□□ -1.14
LSM4-205	ENST00000597776	PSMB6	P28072	239 aa		7.9	□□□□□ -1.14
LSM4-205	ENST00000597776	HSPA13	P48723	471 aa		7.9	□□□□□ -1.14
LSM4-205	ENST00000597776	FAM209B	Q5JX69	171 aa		7.9	□□□□□ -1.14
LSM4-205	ENST00000597776	GPHB5	Q86YW7	130 aa		7.9	□□□□□ -1.14
LSM4-205	ENST00000597776	SECTM1	Q8WVN6	248 aa		7.9	□□□□□ -1.14
LSM4-205	ENST00000597776	VCX3B	Q9H321	246 aa		7.9	□□□□□ -1.14
LSM4-205	ENST00000597776	RRP15	Q9Y3B9	282 aa	Known RBP	7.9	□□□□□ -1.14
LSM4-205	ENST00000597776	DEFA4	P12838	97 aa		7.89	□□□□□ -1.15
LSM4-205	ENST00000597776	CTRB1	P17538	263 aa		7.89	□□□□□ -1.15
LSM4-205	ENST00000597776	HLA-G	P17693	338 aa		7.89	□□□□□ -1.15
LSM4-205	ENST00000597776	FGF9	P31371	208 aa	Predicted RBP	7.89	□□□□□ -1.15
LSM4-205	ENST00000597776	MAS1L	P35410	378 aa		7.89	□□□□□ -1.15
LSM4-205	ENST00000597776	RPL8	P62917	257 aa	Known RBP	7.89	□□□□□ -1.15
LSM4-205	ENST00000597776	TIMM50	Q3ZCQ8	353 aa		7.89	□□□□□ -1.15
LSM4-205	ENST00000597776	TM4SF20	Q53R12	229 aa		7.89	□□□□□ -1.15
LSM4-205	ENST00000597776	UBE2U	Q5VVX9	321 aa		7.89	□□□□□ -1.15
LSM4-205	ENST00000597776	ZNF57	Q68EA5	555 aa	Predicted RBP	7.89	□□□□□ -1.15
LSM4-205	ENST00000597776	CTRB2	Q6GPI1	263 aa		7.89	□□□□□ -1.15
LSM4-205	ENST00000597776	OR4A47	Q6IF82	309 aa		7.89	□□□□□ -1.15
LSM4-205	ENST00000597776	SFXN4	Q6P4A7	337 aa		7.89	□□□□□ -1.15
LSM4-205	ENST00000597776	BTNL8	Q6UX41	500 aa		7.89	□□□□□ -1.15
LSM4-205	ENST00000597776	UNQ9165/PRO28630	Q6UXU0	137 aa		7.89	□□□□□ -1.15
LSM4-205	ENST00000597776	ZNF66	Q6ZN08	573 aa		7.89	□□□□□ -1.15
LSM4-205	ENST00000597776	GVQW1	Q8N7I0	195 aa		7.89	□□□□□ -1.15
LSM4-205	ENST00000597776	UXS1	Q8NBZ7	420 aa		7.89	□□□□□ -1.15
LSM4-205	ENST00000597776	OR13F1	Q8NGS4	319 aa		7.89	□□□□□ -1.15
LSM4-205	ENST00000597776	IL17D	Q8TAD2	202 aa		7.89	□□□□□ -1.15
LSM4-205	ENST00000597776	EEF1AKMT3	Q96AZ1	226 aa		7.89	□□□□□ -1.15
LSM4-205	ENST00000597776	HRASLS	Q9HDD0	168 aa		7.89	□□□□□ -1.15
LSM4-205	ENST00000597776	CCL28	Q9NRJ3	127 aa		7.89	□□□□□ -1.15
LSM4-205	ENST00000597776	RHBDL2	Q9NX52	303 aa		7.89	□□□□□ -1.15

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