RNA–Protein interactions for RNA: ENST00000595659.5

CCDC9-202, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 356 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-202ENST00000595659 Q8N402 240 aa12.92□□□□□ -0.34
CCDC9-202ENST00000595659 NECAP1Q8NC96 275 aa12.92□□□□□ -0.34
CCDC9-202ENST00000595659 SLC25A38Q96DW6 304 aa12.92□□□□□ -0.34
CCDC9-202ENST00000595659 OR2A7Q96R45 310 aa12.92□□□□□ -0.34
CCDC9-202ENST00000595659 HSD17B10Q99714 261 aaKnown RBP12.92□□□□□ -0.34
CCDC9-202ENST00000595659 CCL28Q9NRJ3 127 aa12.92□□□□□ -0.34
CCDC9-202ENST00000595659 PEMTQ9UBM1 199 aa12.92□□□□□ -0.34
CCDC9-202ENST00000595659 DYNC2H1Q8NCM8 4307 aaKnown RBP12.92□□□□□ -0.34
CCDC9-202ENST00000595659 A0A1B0GW64 132 aa12.91□□□□□ -0.34
CCDC9-202ENST00000595659 DPPA5A6NC42 116 aa12.91□□□□□ -0.34
CCDC9-202ENST00000595659 SCGNO76038 276 aa12.91□□□□□ -0.34
CCDC9-202ENST00000595659 OR2C1O95371 312 aa12.91□□□□□ -0.34
CCDC9-202ENST00000595659 RPL27AP46776 148 aaKnown RBP12.91□□□□□ -0.34
CCDC9-202ENST00000595659 ARPC4P59998 168 aa12.91□□□□□ -0.34
CCDC9-202ENST00000595659 NEDD8Q15843 81 aa12.91□□□□□ -0.34
CCDC9-202ENST00000595659 CD300EQ496F6 205 aaPredicted RBP12.91□□□□□ -0.34
CCDC9-202ENST00000595659 ZNF773Q6PK81 442 aa12.91□□□□□ -0.34
CCDC9-202ENST00000595659 PUSL1Q8N0Z8 303 aaKnown RBP12.91□□□□□ -0.34
CCDC9-202ENST00000595659 BEST4Q8NFU0 473 aa12.91□□□□□ -0.34
CCDC9-202ENST00000595659 Q9H521 79 aa12.91□□□□□ -0.34
CCDC9-202ENST00000595659 SIGLEC8Q9NYZ4 499 aa12.91□□□□□ -0.34
CCDC9-202ENST00000595659 FBXL7Q9UJT9 491 aa12.91□□□□□ -0.34
CCDC9-202ENST00000595659 DNAH7Q8WXX0 4024 aa12.91□□□□□ -0.34
CCDC9-202ENST00000595659 KBTBD11O94819 623 aa12.9□□□□□ -0.34
CCDC9-202ENST00000595659 NDUFB8O95169 186 aa12.9□□□□□ -0.34
CCDC9-202ENST00000595659 REG1AP05451 166 aa12.9□□□□□ -0.34
CCDC9-202ENST00000595659 AREGP15514 252 aa12.9□□□□□ -0.34
CCDC9-202ENST00000595659 MECP2P51608 486 aaKnown RBP12.9□□□□□ -0.34
CCDC9-202ENST00000595659 VSTM2AQ8TAG5 236 aa12.9□□□□□ -0.34
CCDC9-202ENST00000595659 TMEM167AQ8TBQ9 72 aa12.9□□□□□ -0.34
CCDC9-202ENST00000595659 YTHDF1Q9BYJ9 559 aaKnown RBP12.9□□□□□ -0.34
CCDC9-202ENST00000595659 PLEKHA3Q9HB20 300 aa12.9□□□□□ -0.34
CCDC9-202ENST00000595659 ZNF257Q9Y2Q1 563 aa12.9□□□□□ -0.34
CCDC9-202ENST00000595659 DMRT1Q9Y5R6 373 aa12.9□□□□□ -0.34
CCDC9-202ENST00000595659 SACSQ9NZJ4 4579 aa12.89□□□□□ -0.35
CCDC9-202ENST00000595659 MEIS3P1A6NDR6 274 aa12.89□□□□□ -0.35
CCDC9-202ENST00000595659 SULT1C2O00338 296 aa12.89□□□□□ -0.35
CCDC9-202ENST00000595659 ZNF66Q6ZN08 573 aa12.89□□□□□ -0.35
CCDC9-202ENST00000595659 SLC25A42Q86VD7 318 aa12.89□□□□□ -0.35
CCDC9-202ENST00000595659 OR13F1Q8NGS4 319 aa12.89□□□□□ -0.35
CCDC9-202ENST00000595659 DYNLRB2Q8TF09 96 aa12.89□□□□□ -0.35
CCDC9-202ENST00000595659 SPATA25Q9BR10 227 aa12.89□□□□□ -0.35
CCDC9-202ENST00000595659 EDA2RQ9HAV5 297 aa12.89□□□□□ -0.35
CCDC9-202ENST00000595659 RETNQ9HD89 108 aa12.89□□□□□ -0.35
CCDC9-202ENST00000595659 SLC2A9Q9NRM0 540 aa12.89□□□□□ -0.35
CCDC9-202ENST00000595659 RYR2Q92736 4967 aa12.88□□□□□ -0.35
CCDC9-202ENST00000595659 AIREO43918 545 aa12.88□□□□□ -0.35
CCDC9-202ENST00000595659 ZNF735P0CB33 412 aa12.88□□□□□ -0.35
CCDC9-202ENST00000595659 FXYD4P59646 89 aa12.88□□□□□ -0.35
CCDC9-202ENST00000595659 CD81P60033 236 aa12.88□□□□□ -0.35
CCDC9-202ENST00000595659 GUCA2BQ16661 112 aa12.88□□□□□ -0.35
CCDC9-202ENST00000595659 CLEC19AQ6UXS0 136 aa12.88□□□□□ -0.35
CCDC9-202ENST00000595659 HOGA1Q86XE5 327 aa12.88□□□□□ -0.35
CCDC9-202ENST00000595659 SPAG16Q8N0X2 631 aa12.88□□□□□ -0.35
CCDC9-202ENST00000595659 ISOC1Q96CN7 298 aa12.88□□□□□ -0.35
CCDC9-202ENST00000595659 FANCD2OSQ96PS1 177 aa12.88□□□□□ -0.35
CCDC9-202ENST00000595659 SLC5A7Q9GZV3 580 aa12.88□□□□□ -0.35
CCDC9-202ENST00000595659 HRASLSQ9HDD0 168 aa12.88□□□□□ -0.35
CCDC9-202ENST00000595659 ETV7Q9Y603 341 aa12.88□□□□□ -0.35
CCDC9-202ENST00000595659 ZNF785A8K8V0 405 aa12.87□□□□□ -0.35
CCDC9-202ENST00000595659 NPIPB5A8MRT5 1133 aa12.87□□□□□ -0.35
CCDC9-202ENST00000595659 GGCTO75223 188 aaKnown RBP12.87□□□□□ -0.35
CCDC9-202ENST00000595659 HRASP01112 189 aa12.87□□□□□ -0.35
CCDC9-202ENST00000595659 PPYP01298 95 aa12.87□□□□□ -0.35
CCDC9-202ENST00000595659 CD7P09564 240 aa12.87□□□□□ -0.35
CCDC9-202ENST00000595659 FOLR2P14207 255 aa12.87□□□□□ -0.35
CCDC9-202ENST00000595659 PSMB6P28072 239 aa12.87□□□□□ -0.35
CCDC9-202ENST00000595659 TGFBR1P36897 503 aa12.87□□□□□ -0.35
CCDC9-202ENST00000595659 DEFB114Q30KQ6 69 aa12.87□□□□□ -0.35
CCDC9-202ENST00000595659 OR4A47Q6IF82 309 aa12.87□□□□□ -0.35
CCDC9-202ENST00000595659 DEFB125Q8N687 156 aa12.87□□□□□ -0.35
CCDC9-202ENST00000595659 CACNG8Q8WXS5 425 aa12.87□□□□□ -0.35
CCDC9-202ENST00000595659 KCTD12Q96CX2 325 aaKnown RBP12.87□□□□□ -0.35
CCDC9-202ENST00000595659 CCDC140Q96MF4 163 aa12.87□□□□□ -0.35
CCDC9-202ENST00000595659 NEURL2Q9BR09 285 aa12.87□□□□□ -0.35
CCDC9-202ENST00000595659 WFDC10AQ9H1F0 79 aa12.87□□□□□ -0.35
CCDC9-202ENST00000595659 AUNIPQ9H7T9 357 aa12.87□□□□□ -0.35
CCDC9-202ENST00000595659 ZC4H2Q9NQZ6 224 aa12.87□□□□□ -0.35
CCDC9-202ENST00000595659 DIABLOQ9NR28 239 aa12.87□□□□□ -0.35
CCDC9-202ENST00000595659 TRAV3A0A0B4J244 114 aa12.86□□□□□ -0.35
CCDC9-202ENST00000595659 C2orf70A6NJV1 201 aa12.86□□□□□ -0.35
CCDC9-202ENST00000595659 DEFA4P12838 97 aa12.86□□□□□ -0.35
CCDC9-202ENST00000595659 RPA2P15927 270 aa12.86□□□□□ -0.35
CCDC9-202ENST00000595659 HLA-GP17693 338 aa12.86□□□□□ -0.35
CCDC9-202ENST00000595659 MAS1LP35410 378 aa12.86□□□□□ -0.35
CCDC9-202ENST00000595659 ARL3P36405 182 aa12.86□□□□□ -0.35
CCDC9-202ENST00000595659 RPL8P62917 257 aaKnown RBP12.86□□□□□ -0.35
CCDC9-202ENST00000595659 OR2K2Q8NGT1 345 aa12.86□□□□□ -0.35
CCDC9-202ENST00000595659 FAM110AQ9BQ89 295 aa12.86□□□□□ -0.35
CCDC9-202ENST00000595659 TENM2Q9NT68 2774 aa12.86□□□□□ -0.35
CCDC9-202ENST00000595659 ZNF320A2RRD8 509 aa12.85□□□□□ -0.35
CCDC9-202ENST00000595659 CGB1A6NKQ9 187 aa12.85□□□□□ -0.35
CCDC9-202ENST00000595659 TPPPO94811 219 aa12.85□□□□□ -0.35
CCDC9-202ENST00000595659 CRYGCP07315 174 aa12.85□□□□□ -0.35
CCDC9-202ENST00000595659 CTRB1P17538 263 aa12.85□□□□□ -0.35
CCDC9-202ENST00000595659 KIR2DS2P43631 304 aa12.85□□□□□ -0.35
CCDC9-202ENST00000595659 SCAND1P57086 179 aa12.85□□□□□ -0.35
CCDC9-202ENST00000595659 TIMM50Q3ZCQ8 353 aa12.85□□□□□ -0.35
CCDC9-202ENST00000595659 CTRB2Q6GPI1 263 aa12.85□□□□□ -0.35
CCDC9-202ENST00000595659 TMEM17Q86X19 198 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms