RNA–Protein interactions for RNA: ENST00000593564.2

LSM4-202, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 656 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-202ENST00000593564 KBTBD11O94819 623 aa18.03■□□□□ 0.48
LSM4-202ENST00000593564 IL6RP08887 468 aaPredicted RBP18.03■□□□□ 0.48
LSM4-202ENST00000593564 RBMY1DP0C7P1 496 aaKnown RBP18.03■□□□□ 0.48
LSM4-202ENST00000593564 EIF4EBP1Q13541 118 aaPredicted RBP18.03■□□□□ 0.48
LSM4-202ENST00000593564 PUSL1Q8N0Z8 303 aaKnown RBP18.03■□□□□ 0.48
LSM4-202ENST00000593564 TMEM167AQ8TBQ9 72 aa18.03■□□□□ 0.48
LSM4-202ENST00000593564 OR2A7Q96R45 310 aa18.03■□□□□ 0.48
LSM4-202ENST00000593564 FAM110AQ9BQ89 295 aa18.03■□□□□ 0.48
LSM4-202ENST00000593564 VCX3BQ9H321 246 aa18.03■□□□□ 0.48
LSM4-202ENST00000593564 FBXL7Q9UJT9 491 aa18.03■□□□□ 0.48
LSM4-202ENST00000593564 HLA-AP01891 365 aaKnown RBP18.02■□□□□ 0.48
LSM4-202ENST00000593564 MAS1LP35410 378 aa18.02■□□□□ 0.48
LSM4-202ENST00000593564 RPL27AP46776 148 aaKnown RBP18.02■□□□□ 0.48
LSM4-202ENST00000593564 HSPA13P48723 471 aa18.02■□□□□ 0.48
LSM4-202ENST00000593564 NUDCD2Q8WVJ2 157 aa18.02■□□□□ 0.48
LSM4-202ENST00000593564 CNBD2Q96M20 576 aa18.02■□□□□ 0.48
LSM4-202ENST00000593564 SRD5A3Q9H8P0 318 aa18.02■□□□□ 0.48
LSM4-202ENST00000593564 SLC2A9Q9NRM0 540 aa18.02■□□□□ 0.48
LSM4-202ENST00000593564 SMIM30A4D0T7 59 aa18.01■□□□□ 0.47
LSM4-202ENST00000593564 DPPA5A6NC42 116 aa18.01■□□□□ 0.47
LSM4-202ENST00000593564 TMEM235A6NFC5 223 aa18.01■□□□□ 0.47
LSM4-202ENST00000593564 NOTOA8MTQ0 251 aa18.01■□□□□ 0.47
LSM4-202ENST00000593564 OR11H12B2RN74 326 aa18.01■□□□□ 0.47
LSM4-202ENST00000593564 SCGNO76038 276 aa18.01■□□□□ 0.47
LSM4-202ENST00000593564 JTBO76095 146 aa18.01■□□□□ 0.47
LSM4-202ENST00000593564 OR2C1O95371 312 aa18.01■□□□□ 0.47
LSM4-202ENST00000593564 ZNF735P0CB33 412 aa18.01■□□□□ 0.47
LSM4-202ENST00000593564 EDN2P20800 178 aa18.01■□□□□ 0.47
LSM4-202ENST00000593564 GUCA2BQ16661 112 aa18.01■□□□□ 0.47
LSM4-202ENST00000593564 C19orf35Q6ZS72 473 aa18.01■□□□□ 0.47
LSM4-202ENST00000593564 GPHB5Q86YW7 130 aa18.01■□□□□ 0.47
LSM4-202ENST00000593564 TCTEX1D2Q8WW35 142 aa18.01■□□□□ 0.47
LSM4-202ENST00000593564 WFDC10AQ9H1F0 79 aa18.01■□□□□ 0.47
LSM4-202ENST00000593564 A0A1B0GW64 132 aa18■□□□□ 0.47
LSM4-202ENST00000593564 E7EUB6 86 aa18■□□□□ 0.47
LSM4-202ENST00000593564 CRYGCP07315 174 aa18■□□□□ 0.47
LSM4-202ENST00000593564 BRWD1-AS2P59051 145 aa18■□□□□ 0.47
LSM4-202ENST00000593564 GNG2P59768 71 aa18■□□□□ 0.47
LSM4-202ENST00000593564 KLK9Q2XQG4 91 aa18■□□□□ 0.47
LSM4-202ENST00000593564 IZUMO2Q6UXV1 221 aa18■□□□□ 0.47
LSM4-202ENST00000593564 CCDC140Q96MF4 163 aa18■□□□□ 0.47
LSM4-202ENST00000593564 FANCD2OSQ96PS1 177 aa18■□□□□ 0.47
LSM4-202ENST00000593564 FYTTD1Q96QD9 318 aaKnown RBP18■□□□□ 0.47
LSM4-202ENST00000593564 ANXA10Q9UJ72 324 aa18■□□□□ 0.47
LSM4-202ENST00000593564 KLK9Q9UKQ9 250 aa18■□□□□ 0.47
LSM4-202ENST00000593564 SPATA2Q9UM82 520 aa18■□□□□ 0.47
LSM4-202ENST00000593564 ALMS1Q8TCU4 4167 aa17.99■□□□□ 0.47
LSM4-202ENST00000593564 FGF9P31371 208 aaPredicted RBP17.99■□□□□ 0.47
LSM4-202ENST00000593564 MFSD4AQ8N468 514 aa17.99■□□□□ 0.47
LSM4-202ENST00000593564 WDR89Q96FK6 387 aaPredicted RBP17.99■□□□□ 0.47
LSM4-202ENST00000593564 TAS2R8Q9NYW2 309 aa17.99■□□□□ 0.47
LSM4-202ENST00000593564 SSX5O60225 188 aa17.98■□□□□ 0.47
LSM4-202ENST00000593564 NDUFB8O95169 186 aa17.98■□□□□ 0.47
LSM4-202ENST00000593564 DHFRP00374 187 aa17.98■□□□□ 0.47
LSM4-202ENST00000593564 IGHV3-23P01764 117 aa17.98■□□□□ 0.47
LSM4-202ENST00000593564 AREGP15514 252 aa17.98■□□□□ 0.47
LSM4-202ENST00000593564 CBLN1P23435 193 aa17.98■□□□□ 0.47
LSM4-202ENST00000593564 PSMB6P28072 239 aa17.98■□□□□ 0.47
LSM4-202ENST00000593564 ARL3P36405 182 aa17.98■□□□□ 0.47
LSM4-202ENST00000593564 ZNF66Q6ZN08 573 aa17.98■□□□□ 0.47
LSM4-202ENST00000593564 TXNL4BQ9NX01 149 aaKnown RBP17.98■□□□□ 0.47
LSM4-202ENST00000593564 MRPS14O60783 128 aaKnown RBP17.97■□□□□ 0.47
LSM4-202ENST00000593564 HRASP01112 189 aa17.97■□□□□ 0.47
LSM4-202ENST00000593564 CTRB1P17538 263 aa17.97■□□□□ 0.47
LSM4-202ENST00000593564 GABARAPL2P60520 117 aa17.97■□□□□ 0.47
LSM4-202ENST00000593564 UBE2UQ5VVX9 321 aa17.97■□□□□ 0.47
LSM4-202ENST00000593564 CTRB2Q6GPI1 263 aa17.97■□□□□ 0.47
LSM4-202ENST00000593564 CLEC19AQ6UXS0 136 aa17.97■□□□□ 0.47
LSM4-202ENST00000593564 SLC16A13Q7RTY0 426 aa17.97■□□□□ 0.47
LSM4-202ENST00000593564 TPRA1Q86W33 373 aa17.97■□□□□ 0.47
LSM4-202ENST00000593564 EEF1AKMT3Q96AZ1 226 aa17.97■□□□□ 0.47
LSM4-202ENST00000593564 TMEM213A2RRL7 107 aa17.96■□□□□ 0.47
LSM4-202ENST00000593564 A8MWP6 167 aa17.96■□□□□ 0.47
LSM4-202ENST00000593564 HIST1H1BP16401 226 aaKnown RBP17.96■□□□□ 0.47
LSM4-202ENST00000593564 RPL8P62917 257 aaKnown RBP17.96■□□□□ 0.47
LSM4-202ENST00000593564 MSMO1Q15800 293 aa17.96■□□□□ 0.47
LSM4-202ENST00000593564 FAM106AQ4KMX7 169 aa17.96■□□□□ 0.47
LSM4-202ENST00000593564 CACNG8Q8WXS5 425 aa17.96■□□□□ 0.47
LSM4-202ENST00000593564 DAPK2Q9UIK4 370 aa17.96■□□□□ 0.47
LSM4-202ENST00000593564 HLA-GP17693 338 aa17.95■□□□□ 0.46
LSM4-202ENST00000593564 ZNF57Q68EA5 555 aaPredicted RBP17.95■□□□□ 0.46
LSM4-202ENST00000593564 SSX9Q7RTT3 188 aa17.95■□□□□ 0.46
LSM4-202ENST00000593564 TMEM61Q8N0U2 210 aa17.95■□□□□ 0.46
LSM4-202ENST00000593564 OR4A5Q8NH83 315 aa17.95■□□□□ 0.46
LSM4-202ENST00000593564 LGALS14Q8TCE9 139 aa17.95■□□□□ 0.46
LSM4-202ENST00000593564 GPHA2Q96T91 129 aa17.95■□□□□ 0.46
LSM4-202ENST00000593564 S4R3C0 116 aa17.95■□□□□ 0.46
LSM4-202ENST00000593564 IGLV11-55A0A075B6I3 123 aa17.94■□□□□ 0.46
LSM4-202ENST00000593564 ZNF320A2RRD8 509 aa17.94■□□□□ 0.46
LSM4-202ENST00000593564 OR4A47Q6IF82 309 aa17.94■□□□□ 0.46
LSM4-202ENST00000593564 SFXN4Q6P4A7 337 aa17.94■□□□□ 0.46
LSM4-202ENST00000593564 AIFM2Q9BRQ8 373 aa17.94■□□□□ 0.46
LSM4-202ENST00000593564 RHBDL2Q9NX52 303 aa17.94■□□□□ 0.46
LSM4-202ENST00000593564 BET1LQ9NYM9 111 aa17.94■□□□□ 0.46
LSM4-202ENST00000593564 MLXQ9UH92 298 aa17.94■□□□□ 0.46
LSM4-202ENST00000593564 RAB26Q9ULW5 256 aa17.94■□□□□ 0.46
LSM4-202ENST00000593564 RRP15Q9Y3B9 282 aaKnown RBP17.94■□□□□ 0.46
LSM4-202ENST00000593564 MYOD1P15172 320 aa17.93■□□□□ 0.46
LSM4-202ENST00000593564 PSMB9P28065 219 aa17.93■□□□□ 0.46
LSM4-202ENST00000593564 UXS1Q8NBZ7 420 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms