RNA–Protein interactions for RNA: ENST00000593053.1

PRKCSH-218, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 5

Gene PRKCSH, Length 588 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-218ENST00000593053 VSTM2AQ8TAG5 236 aa10.01□□□□□ -0.81
PRKCSH-218ENST00000593053 OR2A7Q96R45 310 aa10.01□□□□□ -0.81
PRKCSH-218ENST00000593053 AKIP1Q9NQ31 210 aa10.01□□□□□ -0.81
PRKCSH-218ENST00000593053 CCL28Q9NRJ3 127 aa10.01□□□□□ -0.81
PRKCSH-218ENST00000593053 ADAM30Q9UKF2 790 aa10.01□□□□□ -0.81
PRKCSH-218ENST00000593053 MEIS3P1A6NDR6 274 aa10□□□□□ -0.81
PRKCSH-218ENST00000593053 HMX3A6NHT5 357 aa10□□□□□ -0.81
PRKCSH-218ENST00000593053 FAM223BA6NKX1 122 aa10□□□□□ -0.81
PRKCSH-218ENST00000593053 KBTBD11O94819 623 aa10□□□□□ -0.81
PRKCSH-218ENST00000593053 PPYP01298 95 aa10□□□□□ -0.81
PRKCSH-218ENST00000593053 FRMD6-AS1P0C7T7 363 aa10□□□□□ -0.81
PRKCSH-218ENST00000593053 ZNF45Q02386 682 aa10□□□□□ -0.81
PRKCSH-218ENST00000593053 ATP5G2Q06055 141 aa10□□□□□ -0.81
PRKCSH-218ENST00000593053 EXOSC2Q13868 293 aaKnown RBP10□□□□□ -0.81
PRKCSH-218ENST00000593053 RPEL1Q2QD12 228 aa10□□□□□ -0.81
PRKCSH-218ENST00000593053 IL34Q6ZMJ4 242 aa10□□□□□ -0.81
PRKCSH-218ENST00000593053 SSX9Q7RTT3 188 aa10□□□□□ -0.81
PRKCSH-218ENST00000593053 FAM223AQ8IWN6 122 aa10□□□□□ -0.81
PRKCSH-218ENST00000593053 TTC9CQ8N5M4 171 aa10□□□□□ -0.81
PRKCSH-218ENST00000593053 TMEM167AQ8TBQ9 72 aa10□□□□□ -0.81
PRKCSH-218ENST00000593053 SNAPC3Q92966 411 aa10□□□□□ -0.81
PRKCSH-218ENST00000593053 NBEAL2Q6ZNJ1 2754 aa9.99□□□□□ -0.81
PRKCSH-218ENST00000593053 TRBV9A0A0B4J1U6 114 aa9.99□□□□□ -0.81
PRKCSH-218ENST00000593053 TEX22C9J3V5 150 aa9.99□□□□□ -0.81
PRKCSH-218ENST00000593053 NOL3O60936 208 aaKnown RBP9.99□□□□□ -0.81
PRKCSH-218ENST00000593053 TMEM127O75204 238 aa9.99□□□□□ -0.81
PRKCSH-218ENST00000593053 OR2J3O76001 311 aa9.99□□□□□ -0.81
PRKCSH-218ENST00000593053 RPS19P39019 145 aaKnown RBP9.99□□□□□ -0.81
PRKCSH-218ENST00000593053 KIR2DS2P43631 304 aa9.99□□□□□ -0.81
PRKCSH-218ENST00000593053 CBX5P45973 191 aa9.99□□□□□ -0.81
PRKCSH-218ENST00000593053 RPL27AP46776 148 aaKnown RBP9.99□□□□□ -0.81
PRKCSH-218ENST00000593053 FXYD4P59646 89 aa9.99□□□□□ -0.81
PRKCSH-218ENST00000593053 MSMO1Q15800 293 aa9.99□□□□□ -0.81
PRKCSH-218ENST00000593053 TATDN3Q17R31 274 aa9.99□□□□□ -0.81
PRKCSH-218ENST00000593053 C19orf35Q6ZS72 473 aa9.99□□□□□ -0.81
PRKCSH-218ENST00000593053 SLC25A42Q86VD7 318 aa9.99□□□□□ -0.81
PRKCSH-218ENST00000593053 CROCCP3Q8IVE0 287 aa9.99□□□□□ -0.81
PRKCSH-218ENST00000593053 PUSL1Q8N0Z8 303 aaKnown RBP9.99□□□□□ -0.81
PRKCSH-218ENST00000593053 FYTTD1Q96QD9 318 aaKnown RBP9.99□□□□□ -0.81
PRKCSH-218ENST00000593053 SLC5A7Q9GZV3 580 aa9.99□□□□□ -0.81
PRKCSH-218ENST00000593053 HUWE1Q7Z6Z7 4374 aaKnown RBP9.98□□□□□ -0.81
PRKCSH-218ENST00000593053 BMPR1BO00238 502 aa9.98□□□□□ -0.81
PRKCSH-218ENST00000593053 XRCC3O43542 346 aa9.98□□□□□ -0.81
PRKCSH-218ENST00000593053 HRASP01112 189 aa9.98□□□□□ -0.81
PRKCSH-218ENST00000593053 CSN3P07498 182 aa9.98□□□□□ -0.81
PRKCSH-218ENST00000593053 IL6RP08887 468 aaPredicted RBP9.98□□□□□ -0.81
PRKCSH-218ENST00000593053 TMEM17Q86X19 198 aa9.98□□□□□ -0.81
PRKCSH-218ENST00000593053 SPAG16Q8N0X2 631 aa9.98□□□□□ -0.81
PRKCSH-218ENST00000593053 Q8N1Y9 231 aa9.98□□□□□ -0.81
PRKCSH-218ENST00000593053 SAMD12Q8N8I0 201 aa9.98□□□□□ -0.81
PRKCSH-218ENST00000593053 NECAP1Q8NC96 275 aa9.98□□□□□ -0.81
PRKCSH-218ENST00000593053 ZBTB34Q8NCN2 500 aa9.98□□□□□ -0.81
PRKCSH-218ENST00000593053 OR5AP2Q8NGF4 316 aa9.98□□□□□ -0.81
PRKCSH-218ENST00000593053 GIMAP1Q8WWP7 306 aa9.98□□□□□ -0.81
PRKCSH-218ENST00000593053 S100A16Q96FQ6 103 aaKnown RBP9.98□□□□□ -0.81
PRKCSH-218ENST00000593053 SLIRPQ9GZT3 109 aaKnown RBP9.98□□□□□ -0.81
PRKCSH-218ENST00000593053 IFT46Q9NQC8 304 aa9.98□□□□□ -0.81
PRKCSH-218ENST00000593053 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.97□□□□□ -0.81
PRKCSH-218ENST00000593053 A0A1B0GW64 132 aa9.97□□□□□ -0.81
PRKCSH-218ENST00000593053 E7EUB6 86 aa9.97□□□□□ -0.81
PRKCSH-218ENST00000593053 H0Y980 276 aa9.97□□□□□ -0.81
PRKCSH-218ENST00000593053 SULT1C2O00338 296 aa9.97□□□□□ -0.81
PRKCSH-218ENST00000593053 IGHV4-30-4P0DP06 118 aa9.97□□□□□ -0.81
PRKCSH-218ENST00000593053 MYOD1P15172 320 aa9.97□□□□□ -0.81
PRKCSH-218ENST00000593053 AREGP15514 252 aa9.97□□□□□ -0.81
PRKCSH-218ENST00000593053 MAS1LP35410 378 aa9.97□□□□□ -0.81
PRKCSH-218ENST00000593053 TAS2R20P59543 309 aa9.97□□□□□ -0.81
PRKCSH-218ENST00000593053 RPL8P62917 257 aaKnown RBP9.97□□□□□ -0.81
PRKCSH-218ENST00000593053 C15orf32Q32M92 178 aa9.97□□□□□ -0.81
PRKCSH-218ENST00000593053 UBE2NLQ5JXB2 153 aa9.97□□□□□ -0.81
PRKCSH-218ENST00000593053 RCHY1Q96PM5 261 aa9.97□□□□□ -0.81
PRKCSH-218ENST00000593053 SLC2A9Q9NRM0 540 aa9.97□□□□□ -0.81
PRKCSH-218ENST00000593053 ZNF257Q9Y2Q1 563 aa9.97□□□□□ -0.81
PRKCSH-218ENST00000593053 STAB2Q8WWQ8 2551 aa9.97□□□□□ -0.81
PRKCSH-218ENST00000593053 SORL1Q92673 2214 aa9.97□□□□□ -0.81
PRKCSH-218ENST00000593053 NPIPB5A8MRT5 1133 aa9.96□□□□□ -0.82
PRKCSH-218ENST00000593053 RBFOX2O43251 390 aaKnown RBP eCLIP9.96□□□□□ -0.821e-7■■■■■ 31.4
PRKCSH-218ENST00000593053 ZNF735P0CB33 412 aa9.96□□□□□ -0.82
PRKCSH-218ENST00000593053 HLA-GP17693 338 aa9.96□□□□□ -0.82
PRKCSH-218ENST00000593053 HERV-K104P61576 105 aa9.96□□□□□ -0.82
PRKCSH-218ENST00000593053 CATR1Q13166 79 aa9.96□□□□□ -0.82
PRKCSH-218ENST00000593053 TMEM69Q5SWH9 247 aa9.96□□□□□ -0.82
PRKCSH-218ENST00000593053 OR4A47Q6IF82 309 aa9.96□□□□□ -0.82
PRKCSH-218ENST00000593053 ZNF818PQ6ZRF7 136 aa9.96□□□□□ -0.82
PRKCSH-218ENST00000593053 SGPP2Q8IWX5 399 aa9.96□□□□□ -0.82
PRKCSH-218ENST00000593053 OR51H1Q8NH63 302 aa9.96□□□□□ -0.82
PRKCSH-218ENST00000593053 TSC22D3Q99576 134 aa9.96□□□□□ -0.82
PRKCSH-218ENST00000593053 AIFM2Q9BRQ8 373 aa9.96□□□□□ -0.82
PRKCSH-218ENST00000593053 NXF2Q9GZY0 626 aaKnown RBP9.96□□□□□ -0.82
PRKCSH-218ENST00000593053 HRASLSQ9HDD0 168 aa9.96□□□□□ -0.82
PRKCSH-218ENST00000593053 SIGLEC8Q9NYZ4 499 aa9.96□□□□□ -0.82
PRKCSH-218ENST00000593053 EHFQ9NZC4 300 aa9.96□□□□□ -0.82
PRKCSH-218ENST00000593053 PEMTQ9UBM1 199 aa9.96□□□□□ -0.82
PRKCSH-218ENST00000593053 FBXL7Q9UJT9 491 aa9.96□□□□□ -0.82
PRKCSH-218ENST00000593053 RYR3Q15413 4870 aa9.95□□□□□ -0.82
PRKCSH-218ENST00000593053 PPP5D1E7EU14 171 aa9.95□□□□□ -0.82
PRKCSH-218ENST00000593053 NDUFB8O95169 186 aa9.95□□□□□ -0.82
PRKCSH-218ENST00000593053 IGHV3-23P01764 117 aa9.95□□□□□ -0.82
PRKCSH-218ENST00000593053 HLA-AP01891 365 aaKnown RBP9.95□□□□□ -0.82
PRKCSH-218ENST00000593053 PMP2P02689 132 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms