RNA–Protein interactions for RNA: ENST00000592604.5

SMARCA4-219, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 1 (best)

Gene SMARCA4, Length 2,940 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-219ENST00000592604 MPV17P39210 176 aa12.34□□□□□ -0.43
SMARCA4-219ENST00000592604 HTD2P86397 168 aa12.34□□□□□ -0.43
SMARCA4-219ENST00000592604 PDLIM3Q53GG5 364 aaPredicted RBP12.34□□□□□ -0.43
SMARCA4-219ENST00000592604 KLF14Q8TD94 323 aaPredicted RBP12.34□□□□□ -0.43
SMARCA4-219ENST00000592604 AHCTF1Q8WYP5 2266 aa12.34□□□□□ -0.43
SMARCA4-219ENST00000592604 IGHV3-43A0A0B4J1X8 118 aa12.34□□□□□ -0.43
SMARCA4-219ENST00000592604 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.34□□□□□ -0.43
SMARCA4-219ENST00000592604 KLRC4-KLRK1H3BQV0 150 aa12.34□□□□□ -0.43
SMARCA4-219ENST00000592604 HPRT1P00492 218 aa12.34□□□□□ -0.43
SMARCA4-219ENST00000592604 ADH4P08319 380 aa12.34□□□□□ -0.43
SMARCA4-219ENST00000592604 IGHV3-43DP0DP04 118 aa12.34□□□□□ -0.43
SMARCA4-219ENST00000592604 DUTP33316 252 aaKnown RBP12.34□□□□□ -0.43
SMARCA4-219ENST00000592604 VDAC2P45880 294 aaPredicted RBP12.34□□□□□ -0.43
SMARCA4-219ENST00000592604 CDKN1BP46527 198 aa12.34□□□□□ -0.43
SMARCA4-219ENST00000592604 S100A7AQ86SG5 101 aa12.34□□□□□ -0.43
SMARCA4-219ENST00000592604 MDS2Q8NDY4 140 aa12.34□□□□□ -0.43
SMARCA4-219ENST00000592604 OR10G8Q8NGN5 311 aa12.34□□□□□ -0.43
SMARCA4-219ENST00000592604 OCC1Q8TAD7 63 aa12.34□□□□□ -0.43
SMARCA4-219ENST00000592604 MGST2Q99735 147 aa12.34□□□□□ -0.43
SMARCA4-219ENST00000592604 PROP1O75360 226 aa12.33□□□□□ -0.44
SMARCA4-219ENST00000592604 ESDP10768 282 aa12.33□□□□□ -0.44
SMARCA4-219ENST00000592604 CXorf67Q86X51 503 aaPredicted RBP12.33□□□□□ -0.44
SMARCA4-219ENST00000592604 UBALD2Q8IYN6 164 aa12.33□□□□□ -0.44
SMARCA4-219ENST00000592604 NUDT10Q8NFP7 164 aa12.33□□□□□ -0.44
SMARCA4-219ENST00000592604 WFDC12Q8WWY7 111 aa12.33□□□□□ -0.44
SMARCA4-219ENST00000592604 GMPPAQ96IJ6 420 aaPredicted RBP12.33□□□□□ -0.44
SMARCA4-219ENST00000592604 GGTLC1Q9BX51 225 aa12.33□□□□□ -0.44
SMARCA4-219ENST00000592604 CXXC4Q9H2H0 198 aa12.33□□□□□ -0.44
SMARCA4-219ENST00000592604 CBLN4Q9NTU7 201 aa12.33□□□□□ -0.44
SMARCA4-219ENST00000592604 VPS13AQ96RL7 3174 aa12.33□□□□□ -0.44
SMARCA4-219ENST00000592604 CBY3A6NI87 242 aa12.33□□□□□ -0.44
SMARCA4-219ENST00000592604 C15orf65H3BRN8 121 aa12.33□□□□□ -0.44
SMARCA4-219ENST00000592604 YPEL1O60688 119 aa12.33□□□□□ -0.44
SMARCA4-219ENST00000592604 PAFAH1B2P68402 229 aa12.33□□□□□ -0.44
SMARCA4-219ENST00000592604 TGFBR3Q03167 851 aa12.33□□□□□ -0.44
SMARCA4-219ENST00000592604 RNF151Q2KHN1 245 aa12.33□□□□□ -0.44
SMARCA4-219ENST00000592604 ZNF718Q3SXZ3 478 aa12.33□□□□□ -0.44
SMARCA4-219ENST00000592604 TCF23Q7RTU1 214 aa12.33□□□□□ -0.44
SMARCA4-219ENST00000592604 ZCCHC14Q8WYQ9 949 aaKnown RBP12.33□□□□□ -0.44
SMARCA4-219ENST00000592604 YPEL2Q96QA6 119 aa12.33□□□□□ -0.44
SMARCA4-219ENST00000592604 SEPSECSQ9HD40 501 aaKnown RBP12.33□□□□□ -0.44
SMARCA4-219ENST00000592604 C21orf140B9A014 251 aa12.32□□□□□ -0.44
SMARCA4-219ENST00000592604 IGHV1-2P23083 117 aa12.32□□□□□ -0.44
SMARCA4-219ENST00000592604 TRAT1Q6PIZ9 186 aa12.32□□□□□ -0.44
SMARCA4-219ENST00000592604 WDR82Q6UXN9 313 aa12.32□□□□□ -0.44
SMARCA4-219ENST00000592604 RFESDQ8TAC1 157 aa12.32□□□□□ -0.44
SMARCA4-219ENST00000592604 CMTM2Q8TAZ6 248 aa12.32□□□□□ -0.44
SMARCA4-219ENST00000592604 TMEM106BQ9NUM4 274 aa12.32□□□□□ -0.44
SMARCA4-219ENST00000592604 METRNQ9UJH8 293 aa12.32□□□□□ -0.44
SMARCA4-219ENST00000592604 TP53TG3Q9ULZ0 132 aa12.32□□□□□ -0.44
SMARCA4-219ENST00000592604 SCO2A0A1W2PP80 73 aa12.32□□□□□ -0.44
SMARCA4-219ENST00000592604 DEFB108AA8MXU0 73 aa12.32□□□□□ -0.44
SMARCA4-219ENST00000592604 RRHO14718 337 aa12.32□□□□□ -0.44
SMARCA4-219ENST00000592604 SPINT2O43291 252 aa12.32□□□□□ -0.44
SMARCA4-219ENST00000592604 TFF1P04155 84 aa12.32□□□□□ -0.44
SMARCA4-219ENST00000592604 HOXA4Q00056 320 aaPredicted RBP12.32□□□□□ -0.44
SMARCA4-219ENST00000592604 INO80CQ6PI98 192 aaPredicted RBP12.32□□□□□ -0.44
SMARCA4-219ENST00000592604 TPRX1Q8N7U7 411 aa12.32□□□□□ -0.44
SMARCA4-219ENST00000592604 TMEM204Q9BSN7 226 aa12.32□□□□□ -0.44
SMARCA4-219ENST00000592604 DEFB127Q9H1M4 99 aa12.32□□□□□ -0.44
SMARCA4-219ENST00000592604 MS4A5Q9H3V2 200 aa12.32□□□□□ -0.44
SMARCA4-219ENST00000592604 ZDHHC11Q9H8X9 412 aa12.32□□□□□ -0.44
SMARCA4-219ENST00000592604 FOXJ2Q9P0K8 574 aa12.32□□□□□ -0.44
SMARCA4-219ENST00000592604 GFRA3O60609 400 aa12.31□□□□□ -0.44
SMARCA4-219ENST00000592604 TDGF1P3P51864 188 aa12.31□□□□□ -0.44
SMARCA4-219ENST00000592604 ARSJQ5FYB0 599 aaPredicted RBP12.31□□□□□ -0.44
SMARCA4-219ENST00000592604 MIC13Q5XKP0 118 aa12.31□□□□□ -0.44
SMARCA4-219ENST00000592604 MRPL52Q86TS9 123 aaKnown RBP12.31□□□□□ -0.44
SMARCA4-219ENST00000592604 OR4A16Q8NH70 328 aa12.31□□□□□ -0.44
SMARCA4-219ENST00000592604 FAM216AQ8WUB2 273 aa12.31□□□□□ -0.44
SMARCA4-219ENST00000592604 TBX15Q96SF7 602 aa12.31□□□□□ -0.44
SMARCA4-219ENST00000592604 IL36BQ9NZH7 164 aa12.31□□□□□ -0.44
SMARCA4-219ENST00000592604 SPRR3Q9UBC9 169 aa12.31□□□□□ -0.44
SMARCA4-219ENST00000592604 LSM4Q9Y4Z0 139 aaKnown RBP12.31□□□□□ -0.44
SMARCA4-219ENST00000592604 FCGR3BO75015 233 aa12.31□□□□□ -0.44
SMARCA4-219ENST00000592604 PRAMEF5Q5TYX0 476 aa12.31□□□□□ -0.44
SMARCA4-219ENST00000592604 PRAMEF6Q5VXH4 476 aa12.31□□□□□ -0.44
SMARCA4-219ENST00000592604 TNFRSF14Q92956 283 aa12.31□□□□□ -0.44
SMARCA4-219ENST00000592604 HEYLQ9NQ87 328 aaPredicted RBP12.31□□□□□ -0.44
SMARCA4-219ENST00000592604 TET2Q6N021 2002 aaPredicted RBP12.31□□□□□ -0.44
SMARCA4-219ENST00000592604 TMEM265A0A087WTH1 108 aa12.31□□□□□ -0.44
SMARCA4-219ENST00000592604 CEACAM8P31997 349 aaPredicted RBP12.31□□□□□ -0.44
SMARCA4-219ENST00000592604 GPR12P47775 334 aa12.31□□□□□ -0.44
SMARCA4-219ENST00000592604 WDR73Q6P4I2 378 aa12.31□□□□□ -0.44
SMARCA4-219ENST00000592604 Q8TCH9 128 aa12.31□□□□□ -0.44
SMARCA4-219ENST00000592604 C1orf159Q96HA4 380 aa12.31□□□□□ -0.44
SMARCA4-219ENST00000592604 YTHDF2Q9Y5A9 579 aaKnown RBP12.31□□□□□ -0.44
SMARCA4-219ENST00000592604 LY96Q9Y6Y9 160 aa12.31□□□□□ -0.44
SMARCA4-219ENST00000592604 LINC00310P59036 64 aa12.3□□□□□ -0.44
SMARCA4-219ENST00000592604 TPPP2P59282 170 aa12.3□□□□□ -0.44
SMARCA4-219ENST00000592604 SMIM15Q7Z3B0 74 aa12.3□□□□□ -0.44
SMARCA4-219ENST00000592604 SDSLQ96GA7 329 aa12.3□□□□□ -0.44
SMARCA4-219ENST00000592604 TRGV5A0A0B4J1U4 118 aa12.3□□□□□ -0.44
SMARCA4-219ENST00000592604 ZNF705FA8MVS1 300 aaPredicted RBP12.3□□□□□ -0.44
SMARCA4-219ENST00000592604 AQP7O14520 342 aa12.3□□□□□ -0.44
SMARCA4-219ENST00000592604 GOSR1O95249 250 aa12.3□□□□□ -0.44
SMARCA4-219ENST00000592604 ZNF705DP0CH99 300 aaPredicted RBP12.3□□□□□ -0.44
SMARCA4-219ENST00000592604 ZNF705BP0CI00 300 aaPredicted RBP12.3□□□□□ -0.44
SMARCA4-219ENST00000592604 RELBQ01201 579 aa12.3□□□□□ -0.44
SMARCA4-219ENST00000592604 SMIM21Q3B7S5 101 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms