RNA–Protein interactions for RNA: ENST00000592412.5

CIRBP-238, Transcript of cold inducible RNA binding protein, human

TSL 4

Gene CIRBP, Length 532 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIRBP-238	ENST00000592412	BTNL8	Q6UX41	500 aa		13.61	□□□□□ -0.23
CIRBP-238	ENST00000592412		Q6ZS49	121 aa		13.61	□□□□□ -0.23
CIRBP-238	ENST00000592412	SLC25A42	Q86VD7	318 aa		13.61	□□□□□ -0.23
CIRBP-238	ENST00000592412	WFDC3	Q8IUB2	231 aa		13.61	□□□□□ -0.23
CIRBP-238	ENST00000592412	UXS1	Q8NBZ7	420 aa		13.61	□□□□□ -0.23
CIRBP-238	ENST00000592412	OR10R2	Q8NGX6	335 aa		13.61	□□□□□ -0.23
CIRBP-238	ENST00000592412	CCDC90B	Q9GZT6	254 aa		13.61	□□□□□ -0.23
CIRBP-238	ENST00000592412	ELF5	Q9UKW6	265 aa	Predicted RBP	13.61	□□□□□ -0.23
CIRBP-238	ENST00000592412	BLOC1S6	Q9UL45	172 aa		13.61	□□□□□ -0.23
CIRBP-238	ENST00000592412		V9GY05	133 aa		13.61	□□□□□ -0.23
CIRBP-238	ENST00000592412		A0A075B6Q4	140 aa		13.6	□□□□□ -0.23
CIRBP-238	ENST00000592412	NUPR2	A6NF83	97 aa		13.6	□□□□□ -0.23
CIRBP-238	ENST00000592412		J3QRK9	145 aa		13.6	□□□□□ -0.23
CIRBP-238	ENST00000592412	CREBL2	O60519	120 aa	Predicted RBP	13.6	□□□□□ -0.23
CIRBP-238	ENST00000592412	ARL6IP5	O75915	188 aa		13.6	□□□□□ -0.23
CIRBP-238	ENST00000592412	CRYGC	P07315	174 aa		13.6	□□□□□ -0.23
CIRBP-238	ENST00000592412	AREG	P15514	252 aa		13.6	□□□□□ -0.23
CIRBP-238	ENST00000592412	HIST1H1D	P16402	221 aa	Known RBP	13.6	□□□□□ -0.23
CIRBP-238	ENST00000592412	RYR1	P21817	5038 aa		13.6	□□□□□ -0.23
CIRBP-238	ENST00000592412	FABP5	Q01469	135 aa		13.6	□□□□□ -0.23
CIRBP-238	ENST00000592412	TM4SF20	Q53R12	229 aa		13.6	□□□□□ -0.23
CIRBP-238	ENST00000592412	CEMP1	Q6PRD7	247 aa	Predicted RBP	13.6	□□□□□ -0.23
CIRBP-238	ENST00000592412	UNQ9165/PRO28630	Q6UXU0	137 aa		13.6	□□□□□ -0.23
CIRBP-238	ENST00000592412	LYG2	Q86SG7	212 aa		13.6	□□□□□ -0.23
CIRBP-238	ENST00000592412	ZNF645	Q8N7E2	425 aa		13.6	□□□□□ -0.23
CIRBP-238	ENST00000592412	OR51E2	Q9H255	320 aa		13.6	□□□□□ -0.23
CIRBP-238	ENST00000592412	KBTBD11	O94819	623 aa		13.59	□□□□□ -0.23
CIRBP-238	ENST00000592412	ZNF735	P0CB33	412 aa		13.59	□□□□□ -0.23
CIRBP-238	ENST00000592412	EIF4EBP1	Q13541	118 aa	Predicted RBP	13.59	□□□□□ -0.23
CIRBP-238	ENST00000592412	KCTD9	Q7L273	389 aa		13.59	□□□□□ -0.23
CIRBP-238	ENST00000592412	PRSS48	Q7RTY5	328 aa		13.59	□□□□□ -0.23
CIRBP-238	ENST00000592412	PUSL1	Q8N0Z8	303 aa	Known RBP	13.59	□□□□□ -0.23
CIRBP-238	ENST00000592412	DCUN1D5	Q9BTE7	237 aa		13.59	□□□□□ -0.23
CIRBP-238	ENST00000592412	SLC2A9	Q9NRM0	540 aa		13.59	□□□□□ -0.23
CIRBP-238	ENST00000592412	FAT2	Q9NYQ8	4349 aa		13.58	□□□□□ -0.23
CIRBP-238	ENST00000592412	DNAH2	Q9P225	4427 aa		13.58	□□□□□ -0.24
CIRBP-238	ENST00000592412	IGKV1D-13	A0A0B4J2D9	117 aa		13.58	□□□□□ -0.24
CIRBP-238	ENST00000592412	ZNF320	A2RRD8	509 aa		13.58	□□□□□ -0.24
CIRBP-238	ENST00000592412	MFSD2B	A6NFX1	497 aa		13.58	□□□□□ -0.24
CIRBP-238	ENST00000592412	CGB1	A6NKQ9	187 aa		13.58	□□□□□ -0.24
CIRBP-238	ENST00000592412	HSMCR30	P0CW71	290 aa		13.58	□□□□□ -0.24
CIRBP-238	ENST00000592412	C8orf88	P0DMB2	117 aa		13.58	□□□□□ -0.24
CIRBP-238	ENST00000592412	IGKV1-13	P0DP09	117 aa		13.58	□□□□□ -0.24
CIRBP-238	ENST00000592412	MYOD1	P15172	320 aa		13.58	□□□□□ -0.24
CIRBP-238	ENST00000592412	CTRB1	P17538	263 aa		13.58	□□□□□ -0.24
CIRBP-238	ENST00000592412	RPL27A	P46776	148 aa	Known RBP	13.58	□□□□□ -0.24
CIRBP-238	ENST00000592412	OR10A3	P58181	314 aa		13.58	□□□□□ -0.24
CIRBP-238	ENST00000592412	CTRB2	Q6GPI1	263 aa		13.58	□□□□□ -0.24
CIRBP-238	ENST00000592412	TMEM167A	Q8TBQ9	72 aa		13.58	□□□□□ -0.24
CIRBP-238	ENST00000592412	FYTTD1	Q96QD9	318 aa	Known RBP	13.58	□□□□□ -0.24
CIRBP-238	ENST00000592412	RBMX2	Q9Y388	322 aa	Known RBP	13.58	□□□□□ -0.24
CIRBP-238	ENST00000592412	HLA-DQB1	P01920	261 aa		13.57	□□□□□ -0.24
CIRBP-238	ENST00000592412	NFYA	P23511	347 aa	Predicted RBP	13.57	□□□□□ -0.24
CIRBP-238	ENST00000592412	PSMB6	P28072	239 aa		13.57	□□□□□ -0.24
CIRBP-238	ENST00000592412	ARFRP1	Q13795	201 aa		13.57	□□□□□ -0.24
CIRBP-238	ENST00000592412	TRAM1	Q15629	374 aa		13.57	□□□□□ -0.24
CIRBP-238	ENST00000592412	DEFB135	Q30KP9	77 aa		13.57	□□□□□ -0.24
CIRBP-238	ENST00000592412	FAM106A	Q4KMX7	169 aa		13.57	□□□□□ -0.24
CIRBP-238	ENST00000592412	OR2A7	Q96R45	310 aa		13.57	□□□□□ -0.24
CIRBP-238	ENST00000592412	TP53TG1	Q9Y2A0	90 aa		13.57	□□□□□ -0.24
CIRBP-238	ENST00000592412	IGLV11-55	A0A075B6I3	123 aa		13.56	□□□□□ -0.24
CIRBP-238	ENST00000592412	DEDD	O75618	318 aa		13.56	□□□□□ -0.24
CIRBP-238	ENST00000592412	REG1A	P05451	166 aa		13.56	□□□□□ -0.24
CIRBP-238	ENST00000592412	PSMA1	P25786	263 aa	Known RBP	13.56	□□□□□ -0.24
CIRBP-238	ENST00000592412	MLLT11	Q13015	90 aa	Predicted RBP	13.56	□□□□□ -0.24
CIRBP-238	ENST00000592412		Q6ZWC4	215 aa		13.56	□□□□□ -0.24
CIRBP-238	ENST00000592412	EEF1AKMT3	Q96AZ1	226 aa		13.56	□□□□□ -0.24
CIRBP-238	ENST00000592412	PRELID3B	Q9Y3B1	194 aa		13.56	□□□□□ -0.24
CIRBP-238	ENST00000592412	OR2W1	Q9Y3N9	320 aa		13.56	□□□□□ -0.24
CIRBP-238	ENST00000592412	TRAV25	A0A0B4J276	109 aa		13.55	□□□□□ -0.24
CIRBP-238	ENST00000592412	DPPA5	A6NC42	116 aa		13.55	□□□□□ -0.24
CIRBP-238	ENST00000592412	SPRY2	O43597	315 aa		13.55	□□□□□ -0.24
CIRBP-238	ENST00000592412	CLEC3B	P05452	202 aa		13.55	□□□□□ -0.24
CIRBP-238	ENST00000592412	RAB6A	P20340	208 aa		13.55	□□□□□ -0.24
CIRBP-238	ENST00000592412	GADD45A	P24522	165 aa		13.55	□□□□□ -0.24
CIRBP-238	ENST00000592412	BMI1	P35226	326 aa		13.55	□□□□□ -0.24
CIRBP-238	ENST00000592412	MAP2K4	P45985	399 aa		13.55	□□□□□ -0.24
CIRBP-238	ENST00000592412	ANKRD55	Q3KP44	614 aa		13.55	□□□□□ -0.24
CIRBP-238	ENST00000592412	OR4A47	Q6IF82	309 aa		13.55	□□□□□ -0.24
CIRBP-238	ENST00000592412	OR1L6	Q8NGR2	347 aa		13.55	□□□□□ -0.24
CIRBP-238	ENST00000592412	GPHA2	Q96T91	129 aa		13.55	□□□□□ -0.24
CIRBP-238	ENST00000592412	MRPS7	Q9Y2R9	242 aa	Known RBP	13.55	□□□□□ -0.24
CIRBP-238	ENST00000592412	IFITM5	A6NNB3	132 aa		13.54	□□□□□ -0.24
CIRBP-238	ENST00000592412	ATF4	P18848	351 aa	Predicted RBP	13.54	□□□□□ -0.24
CIRBP-238	ENST00000592412	DTYMK	P23919	212 aa		13.54	□□□□□ -0.24
CIRBP-238	ENST00000592412	MAS1L	P35410	378 aa		13.54	□□□□□ -0.24
CIRBP-238	ENST00000592412	PSMD7	P51665	324 aa		13.54	□□□□□ -0.24
CIRBP-238	ENST00000592412	GABARAPL2	P60520	117 aa		13.54	□□□□□ -0.24
CIRBP-238	ENST00000592412	ZNF585B	Q52M93	769 aa		13.54	□□□□□ -0.24
CIRBP-238	ENST00000592412	NR2C2AP	Q86WQ0	139 aa		13.54	□□□□□ -0.24
CIRBP-238	ENST00000592412	OR4S2	Q8NH73	311 aa		13.54	□□□□□ -0.24
CIRBP-238	ENST00000592412	VSTM2A	Q8TAG5	236 aa		13.54	□□□□□ -0.24
CIRBP-238	ENST00000592412	UBQLN2	Q9UHD9	624 aa		13.54	□□□□□ -0.24
CIRBP-238	ENST00000592412	DNAH17	Q9UFH2	4485 aa		13.54	□□□□□ -0.24
CIRBP-238	ENST00000592412	IGHV3-35	A0A0C4DH35	117 aa		13.53	□□□□□ -0.24
CIRBP-238	ENST00000592412	S1PR2	O95136	353 aa		13.53	□□□□□ -0.24
CIRBP-238	ENST00000592412	CD36	P16671	472 aa		13.53	□□□□□ -0.24
CIRBP-238	ENST00000592412	GPR183	P32249	361 aa		13.53	□□□□□ -0.24
CIRBP-238	ENST00000592412	TALDO1	P37837	337 aa		13.53	□□□□□ -0.24
CIRBP-238	ENST00000592412	TBCE	Q15813	527 aa	Predicted RBP	13.53	□□□□□ -0.24

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