RNA–Protein interactions for RNA: ENST00000589990.1

PRKCSH-210, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 567 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-210ENST00000589990 ZNF880Q6PDB4 577 aa9.46□□□□□ -0.9
PRKCSH-210ENST00000589990 PDPNQ86YL7 162 aa9.46□□□□□ -0.9
PRKCSH-210ENST00000589990 OR5H6Q8NGV6 325 aa9.46□□□□□ -0.9
PRKCSH-210ENST00000589990 PTX4Q96A99 478 aa9.46□□□□□ -0.9
PRKCSH-210ENST00000589990 C5orf30Q96GV9 206 aa9.46□□□□□ -0.9
PRKCSH-210ENST00000589990 ARHGAP5-AS1Q96IT6 56 aa9.46□□□□□ -0.9
PRKCSH-210ENST00000589990 PHB2Q99623 299 aa9.46□□□□□ -0.9
PRKCSH-210ENST00000589990 HDHD3Q9BSH5 251 aaPredicted RBP9.46□□□□□ -0.9
PRKCSH-210ENST00000589990 SLC35D1Q9NTN3 355 aa9.46□□□□□ -0.9
PRKCSH-210ENST00000589990 TECRQ9NZ01 308 aaKnown RBP9.46□□□□□ -0.9
PRKCSH-210ENST00000589990 UBQLN2Q9UHD9 624 aa9.46□□□□□ -0.9
PRKCSH-210ENST00000589990 TP53TG1Q9Y2A0 90 aa9.46□□□□□ -0.9
PRKCSH-210ENST00000589990 S4R3C0 116 aa9.46□□□□□ -0.9
PRKCSH-210ENST00000589990 HSPG2P98160 4391 aa9.45□□□□□ -0.9
PRKCSH-210ENST00000589990 TRBV9A0A0B4J1U6 114 aa9.45□□□□□ -0.9
PRKCSH-210ENST00000589990 M0R1X1 148 aa9.45□□□□□ -0.9
PRKCSH-210ENST00000589990 TMEM127O75204 238 aa9.45□□□□□ -0.9
PRKCSH-210ENST00000589990 OR2J3O76001 311 aa9.45□□□□□ -0.9
PRKCSH-210ENST00000589990 S1PR2O95136 353 aa9.45□□□□□ -0.9
PRKCSH-210ENST00000589990 CTRB1P17538 263 aa9.45□□□□□ -0.9
PRKCSH-210ENST00000589990 ATP5G2Q06055 141 aa9.45□□□□□ -0.9
PRKCSH-210ENST00000589990 SPCS2Q15005 226 aa9.45□□□□□ -0.9
PRKCSH-210ENST00000589990 C10orf55Q5SWW7 151 aa9.45□□□□□ -0.9
PRKCSH-210ENST00000589990 ZNF57Q68EA5 555 aaPredicted RBP9.45□□□□□ -0.9
PRKCSH-210ENST00000589990 CTRB2Q6GPI1 263 aa9.45□□□□□ -0.9
PRKCSH-210ENST00000589990 BTNL8Q6UX41 500 aa9.45□□□□□ -0.9
PRKCSH-210ENST00000589990 IDO2Q6ZQW0 420 aa9.45□□□□□ -0.9
PRKCSH-210ENST00000589990 Q6ZWC4 215 aa9.45□□□□□ -0.9
PRKCSH-210ENST00000589990 OR10R2Q8NGX6 335 aa9.45□□□□□ -0.9
PRKCSH-210ENST00000589990 RNF183Q96D59 192 aa9.45□□□□□ -0.9
PRKCSH-210ENST00000589990 RAB3CQ96E17 227 aa9.45□□□□□ -0.9
PRKCSH-210ENST00000589990 TMEM68Q96MH6 324 aa9.45□□□□□ -0.9
PRKCSH-210ENST00000589990 PECRQ9BY49 303 aa9.45□□□□□ -0.9
PRKCSH-210ENST00000589990 ETV7Q9Y603 341 aa9.45□□□□□ -0.9
PRKCSH-210ENST00000589990 IGKV1-6A0A0C4DH72 117 aa9.44□□□□□ -0.9
PRKCSH-210ENST00000589990 ITGB1BP1O14713 200 aa9.44□□□□□ -0.9
PRKCSH-210ENST00000589990 APOA2P02652 100 aa9.44□□□□□ -0.9
PRKCSH-210ENST00000589990 SCTP09683 121 aa9.44□□□□□ -0.9
PRKCSH-210ENST00000589990 ATF4P18848 351 aaPredicted RBP9.44□□□□□ -0.9
PRKCSH-210ENST00000589990 FCGR2BP31994 310 aaPredicted RBP9.44□□□□□ -0.9
PRKCSH-210ENST00000589990 SCAND1P57086 179 aa9.44□□□□□ -0.9
PRKCSH-210ENST00000589990 UXS1Q8NBZ7 420 aa9.44□□□□□ -0.9
PRKCSH-210ENST00000589990 SRSF12Q8WXF0 261 aaKnown RBP9.44□□□□□ -0.9
PRKCSH-210ENST00000589990 HARBI1Q96MB7 349 aa9.44□□□□□ -0.9
PRKCSH-210ENST00000589990 BCL7BQ9BQE9 202 aa9.44□□□□□ -0.9
PRKCSH-210ENST00000589990 CHMP1AQ9HD42 196 aaPredicted RBP9.44□□□□□ -0.9
PRKCSH-210ENST00000589990 RHBDL2Q9NX52 303 aa9.44□□□□□ -0.9
PRKCSH-210ENST00000589990 COMMD3Q9UBI1 195 aa9.44□□□□□ -0.9
PRKCSH-210ENST00000589990 FBXL17Q9UF56 701 aa9.44□□□□□ -0.9
PRKCSH-210ENST00000589990 HSF4Q9ULV5 492 aa9.44□□□□□ -0.9
PRKCSH-210ENST00000589990 SPATA2Q9UM82 520 aa9.44□□□□□ -0.9
PRKCSH-210ENST00000589990 FAM223BA6NKX1 122 aa9.43□□□□□ -0.9
PRKCSH-210ENST00000589990 FOXI3A8MTJ6 420 aaPredicted RBP9.43□□□□□ -0.9
PRKCSH-210ENST00000589990 H3BMQ9 156 aa9.43□□□□□ -0.9
PRKCSH-210ENST00000589990 LGALS9O00182 355 aa9.43□□□□□ -0.9
PRKCSH-210ENST00000589990 RAB27BO00194 218 aa9.43□□□□□ -0.9
PRKCSH-210ENST00000589990 GNB3P16520 340 aa9.43□□□□□ -0.9
PRKCSH-210ENST00000589990 ZNF182P17025 639 aaPredicted RBP9.43□□□□□ -0.9
PRKCSH-210ENST00000589990 RPL35AP18077 110 aaKnown RBP9.43□□□□□ -0.9
PRKCSH-210ENST00000589990 MRPS15P82914 257 aaKnown RBP9.43□□□□□ -0.9
PRKCSH-210ENST00000589990 TAGLNQ01995 201 aaKnown RBP9.43□□□□□ -0.9
PRKCSH-210ENST00000589990 TNXAQ16473 311 aa9.43□□□□□ -0.9
PRKCSH-210ENST00000589990 C15orf32Q32M92 178 aa9.43□□□□□ -0.9
PRKCSH-210ENST00000589990 PLAC9Q5JTB6 97 aa9.43□□□□□ -0.9
PRKCSH-210ENST00000589990 MZT2AQ6P582 158 aa9.43□□□□□ -0.9
PRKCSH-210ENST00000589990 FAM223AQ8IWN6 122 aa9.43□□□□□ -0.9
PRKCSH-210ENST00000589990 SAMD12Q8N8I0 201 aa9.43□□□□□ -0.9
PRKCSH-210ENST00000589990 ACOT12Q8WYK0 555 aa9.43□□□□□ -0.9
PRKCSH-210ENST00000589990 S100A16Q96FQ6 103 aaKnown RBP9.43□□□□□ -0.9
PRKCSH-210ENST00000589990 CCDC140Q96MF4 163 aa9.43□□□□□ -0.9
PRKCSH-210ENST00000589990 CMSS1Q9BQ75 279 aaKnown RBP9.43□□□□□ -0.9
PRKCSH-210ENST00000589990 DIABLOQ9NR28 239 aa9.43□□□□□ -0.9
PRKCSH-210ENST00000589990 AK3Q9UIJ7 227 aa9.43□□□□□ -0.9
PRKCSH-210ENST00000589990 TRAV18A0A075B6X5 111 aa9.42□□□□□ -0.9
PRKCSH-210ENST00000589990 ZNF320A2RRD8 509 aa9.42□□□□□ -0.9
PRKCSH-210ENST00000589990 MPPED1O15442 326 aa9.42□□□□□ -0.9
PRKCSH-210ENST00000589990 XRCC3O43542 346 aa9.42□□□□□ -0.9
PRKCSH-210ENST00000589990 GGCTO75223 188 aaKnown RBP9.42□□□□□ -0.9
PRKCSH-210ENST00000589990 TUSC2O75896 110 aa9.42□□□□□ -0.9
PRKCSH-210ENST00000589990 SCGNO76038 276 aa9.42□□□□□ -0.9
PRKCSH-210ENST00000589990 CD3GP09693 182 aa9.42□□□□□ -0.9
PRKCSH-210ENST00000589990 ZBTB25P24278 435 aa9.42□□□□□ -0.9
PRKCSH-210ENST00000589990 HLA-DRB3P79483 266 aa9.42□□□□□ -0.9
PRKCSH-210ENST00000589990 ARFRP1Q13795 201 aa9.42□□□□□ -0.9
PRKCSH-210ENST00000589990 PRSS8Q16651 343 aa9.42□□□□□ -0.9
PRKCSH-210ENST00000589990 CDNFQ49AH0 187 aa9.42□□□□□ -0.9
PRKCSH-210ENST00000589990 AP3S1Q92572 193 aa9.42□□□□□ -0.9
PRKCSH-210ENST00000589990 RIMS4Q9H426 269 aaPredicted RBP9.42□□□□□ -0.9
PRKCSH-210ENST00000589990 ZNF221Q9UK13 617 aa9.42□□□□□ -0.9
PRKCSH-210ENST00000589990 HMX3A6NHT5 357 aa9.41□□□□□ -0.9
PRKCSH-210ENST00000589990 SHOXO15266 292 aa9.41□□□□□ -0.9
PRKCSH-210ENST00000589990 HIST1H1DP16402 221 aaKnown RBP9.41□□□□□ -0.9
PRKCSH-210ENST00000589990 TALDO1P37837 337 aa9.41□□□□□ -0.9
PRKCSH-210ENST00000589990 APOC4P55056 127 aa9.41□□□□□ -0.9
PRKCSH-210ENST00000589990 ARL6IP1Q15041 203 aa9.41□□□□□ -0.9
PRKCSH-210ENST00000589990 TMEM177Q53S58 311 aa9.41□□□□□ -0.9
PRKCSH-210ENST00000589990 UBE2NLQ5JXB2 153 aa9.41□□□□□ -0.9
PRKCSH-210ENST00000589990 CLEC19AQ6UXS0 136 aa9.41□□□□□ -0.9
PRKCSH-210ENST00000589990 UNQ9165/PRO28630Q6UXU0 137 aa9.41□□□□□ -0.9
PRKCSH-210ENST00000589990 GPHB5Q86YW7 130 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms