RNA–Protein interactions for RNA: ENST00000589548.5

CXXC1-211, Transcript of CXXC finger protein 1, humanhuman

TSL 3

Gene CXXC1, Length 849 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-211ENST00000589548 IGKV1D-8A0A087WSZ0 117 aa13.22□□□□□ -0.29
CXXC1-211ENST00000589548 KIR2DL5BA0A0G2JN68 375 aa13.22□□□□□ -0.29
CXXC1-211ENST00000589548 KIR2DL5BA0A0G2JPC4 375 aa13.22□□□□□ -0.29
CXXC1-211ENST00000589548 TMEM272A0A1B0GTI8 110 aa13.22□□□□□ -0.29
CXXC1-211ENST00000589548 RPL35AP18077 110 aaKnown RBP13.22□□□□□ -0.29
CXXC1-211ENST00000589548 RPL27AP46776 148 aaKnown RBP13.22□□□□□ -0.29
CXXC1-211ENST00000589548 TMEM91Q6ZNR0 172 aa13.22□□□□□ -0.29
CXXC1-211ENST00000589548 KIR2DL5AQ8N109 375 aa13.22□□□□□ -0.29
CXXC1-211ENST00000589548 TMEM217Q8N7C4 229 aa13.22□□□□□ -0.29
CXXC1-211ENST00000589548 KIR2DL5BQ8NHK3 375 aa13.22□□□□□ -0.29
CXXC1-211ENST00000589548 MARC2Q969Z3 335 aa13.22□□□□□ -0.29
CXXC1-211ENST00000589548 FAM3DQ96BQ1 224 aa13.22□□□□□ -0.29
CXXC1-211ENST00000589548 SPAG8Q99932 426 aaPredicted RBP13.22□□□□□ -0.29
CXXC1-211ENST00000589548 GINS4Q9BRT9 223 aa13.22□□□□□ -0.29
CXXC1-211ENST00000589548 DCUN1D5Q9BTE7 237 aa13.22□□□□□ -0.29
CXXC1-211ENST00000589548 OR51E2Q9H255 320 aa13.22□□□□□ -0.29
CXXC1-211ENST00000589548 PLCXD1Q9NUJ7 323 aa13.22□□□□□ -0.29
CXXC1-211ENST00000589548 LSM2Q9Y333 95 aaKnown RBP13.22□□□□□ -0.29
CXXC1-211ENST00000589548 IGLV11-55A0A075B6I3 123 aa13.21□□□□□ -0.29
CXXC1-211ENST00000589548 IGHV3-35A0A0C4DH35 117 aa13.21□□□□□ -0.29
CXXC1-211ENST00000589548 DPPA5A6NC42 116 aa13.21□□□□□ -0.29
CXXC1-211ENST00000589548 KBTBD11O94819 623 aa13.21□□□□□ -0.29
CXXC1-211ENST00000589548 MYOD1P15172 320 aa13.21□□□□□ -0.29
CXXC1-211ENST00000589548 CTRB1P17538 263 aa13.21□□□□□ -0.29
CXXC1-211ENST00000589548 PSMB6P28072 239 aa13.21□□□□□ -0.29
CXXC1-211ENST00000589548 NANOS2P60321 138 aaKnown RBP13.21□□□□□ -0.29
CXXC1-211ENST00000589548 C2orf76Q3KRA6 126 aa13.21□□□□□ -0.29
CXXC1-211ENST00000589548 CTRB2Q6GPI1 263 aa13.21□□□□□ -0.29
CXXC1-211ENST00000589548 KCTD9Q7L273 389 aa13.21□□□□□ -0.29
CXXC1-211ENST00000589548 PUSL1Q8N0Z8 303 aaKnown RBP13.21□□□□□ -0.29
CXXC1-211ENST00000589548 STPG3Q8N7X2 389 aa13.21□□□□□ -0.29
CXXC1-211ENST00000589548 BPIFB6Q8NFQ5 453 aa13.21□□□□□ -0.29
CXXC1-211ENST00000589548 RAB3CQ96E17 227 aa13.21□□□□□ -0.29
CXXC1-211ENST00000589548 MRPL27Q9P0M9 148 aaKnown RBP13.21□□□□□ -0.29
CXXC1-211ENST00000589548 DNAH17Q9UFH2 4485 aa13.21□□□□□ -0.29
CXXC1-211ENST00000589548 DYNC1H1Q14204 4646 aaKnown RBP13.2□□□□□ -0.3
CXXC1-211ENST00000589548 CGB1A6NKQ9 187 aa13.2□□□□□ -0.3
CXXC1-211ENST00000589548 J3QRK9 145 aa13.2□□□□□ -0.3
CXXC1-211ENST00000589548 MFNGO00587 321 aa13.2□□□□□ -0.3
CXXC1-211ENST00000589548 DENRO43583 198 aaKnown RBP13.2□□□□□ -0.3
CXXC1-211ENST00000589548 IGLV2-14P01704 120 aa13.2□□□□□ -0.3
CXXC1-211ENST00000589548 REG1AP05451 166 aa13.2□□□□□ -0.3
CXXC1-211ENST00000589548 CLEC3BP05452 202 aa13.2□□□□□ -0.3
CXXC1-211ENST00000589548 GNB3P16520 340 aa13.2□□□□□ -0.3
CXXC1-211ENST00000589548 GALP22466 123 aa13.2□□□□□ -0.3
CXXC1-211ENST00000589548 GPR183P32249 361 aa13.2□□□□□ -0.3
CXXC1-211ENST00000589548 MRPS15P82914 257 aaKnown RBP13.2□□□□□ -0.3
CXXC1-211ENST00000589548 SLC38A6Q8IZM9 456 aa13.2□□□□□ -0.3
CXXC1-211ENST00000589548 DHRSXQ8N5I4 330 aa13.2□□□□□ -0.3
CXXC1-211ENST00000589548 ZNF645Q8N7E2 425 aa13.2□□□□□ -0.3
CXXC1-211ENST00000589548 TMEM167AQ8TBQ9 72 aa13.2□□□□□ -0.3
CXXC1-211ENST00000589548 TMEM203Q969S6 136 aa13.2□□□□□ -0.3
CXXC1-211ENST00000589548 MND1Q9BWT6 205 aa13.2□□□□□ -0.3
CXXC1-211ENST00000589548 C5orf66Q9H5L9 145 aa13.2□□□□□ -0.3
CXXC1-211ENST00000589548 ABCA13Q86UQ4 5058 aa13.2□□□□□ -0.3
CXXC1-211ENST00000589548 TSPAN4O14817 238 aa13.19□□□□□ -0.3
CXXC1-211ENST00000589548 BRWD1-AS2P59051 145 aa13.19□□□□□ -0.3
CXXC1-211ENST00000589548 ARFRP1Q13795 201 aa13.19□□□□□ -0.3
CXXC1-211ENST00000589548 C10orf67Q8IYJ2 551 aa13.19□□□□□ -0.3
CXXC1-211ENST00000589548 ZNF502Q8TBZ5 544 aa13.19□□□□□ -0.3
CXXC1-211ENST00000589548 OR2A7Q96R45 310 aa13.19□□□□□ -0.3
CXXC1-211ENST00000589548 MAP6D1Q9H9H5 199 aa13.19□□□□□ -0.3
CXXC1-211ENST00000589548 RBMX2Q9Y388 322 aaKnown RBP13.19□□□□□ -0.3
CXXC1-211ENST00000589548 DNAH11Q96DT5 4516 aa13.19□□□□□ -0.3
CXXC1-211ENST00000589548 A0A075B6Q4 140 aa13.18□□□□□ -0.3
CXXC1-211ENST00000589548 TRBV7-1A0A0A6YYK4 115 aa13.18□□□□□ -0.3
CXXC1-211ENST00000589548 HIST1H1BP16401 226 aaKnown RBP13.18□□□□□ -0.3
CXXC1-211ENST00000589548 ELLP55199 621 aaPredicted RBP13.18□□□□□ -0.3
CXXC1-211ENST00000589548 SPHARQ15513 63 aa13.18□□□□□ -0.3
CXXC1-211ENST00000589548 LIPKQ5VXJ0 399 aa13.18□□□□□ -0.3
CXXC1-211ENST00000589548 C8orf59Q8N0T1 100 aaPredicted RBP13.18□□□□□ -0.3
CXXC1-211ENST00000589548 ZNF436Q9C0F3 470 aaPredicted RBP13.18□□□□□ -0.3
CXXC1-211ENST00000589548 FBXL17Q9UF56 701 aa13.18□□□□□ -0.3
CXXC1-211ENST00000589548 MRPS7Q9Y2R9 242 aaKnown RBP13.18□□□□□ -0.3
CXXC1-211ENST00000589548 UFC1Q9Y3C8 167 aa13.18□□□□□ -0.3
CXXC1-211ENST00000589548 IGKV1D-13A0A0B4J2D9 117 aa13.17□□□□□ -0.3
CXXC1-211ENST00000589548 RAB27BO00194 218 aa13.17□□□□□ -0.3
CXXC1-211ENST00000589548 IGKV1-13P0DP09 117 aa13.17□□□□□ -0.3
CXXC1-211ENST00000589548 MAS1LP35410 378 aa13.17□□□□□ -0.3
CXXC1-211ENST00000589548 RPS25P62851 125 aaKnown RBP13.17□□□□□ -0.3
CXXC1-211ENST00000589548 EIF4EBP1Q13541 118 aaPredicted RBP13.17□□□□□ -0.3
CXXC1-211ENST00000589548 HES5Q5TA89 166 aa13.17□□□□□ -0.3
CXXC1-211ENST00000589548 Q6ZS49 121 aa13.17□□□□□ -0.3
CXXC1-211ENST00000589548 OR10R2Q8NGX6 335 aa13.17□□□□□ -0.3
CXXC1-211ENST00000589548 TMEM190Q8WZ59 177 aa13.17□□□□□ -0.3
CXXC1-211ENST00000589548 ELF5Q9UKW6 265 aaPredicted RBP13.17□□□□□ -0.3
CXXC1-211ENST00000589548 RAB22AQ9UL26 194 aa13.17□□□□□ -0.3
CXXC1-211ENST00000589548 PRELID3BQ9Y3B1 194 aa13.17□□□□□ -0.3
CXXC1-211ENST00000589548 DHFRP00374 187 aa13.16□□□□□ -0.3
CXXC1-211ENST00000589548 HIST1H1DP16402 221 aaKnown RBP13.16□□□□□ -0.3
CXXC1-211ENST00000589548 PSMD7P51665 324 aa13.16□□□□□ -0.3
CXXC1-211ENST00000589548 RBMS2Q15434 407 aaKnown RBP13.16□□□□□ -0.3
CXXC1-211ENST00000589548 ZNF124Q15973 351 aa13.16□□□□□ -0.3
CXXC1-211ENST00000589548 OR5B3Q8NH48 314 aa13.16□□□□□ -0.3
CXXC1-211ENST00000589548 OR4S2Q8NH73 311 aa13.16□□□□□ -0.3
CXXC1-211ENST00000589548 VSTM2AQ8TAG5 236 aa13.16□□□□□ -0.3
CXXC1-211ENST00000589548 GALNT14Q96FL9 552 aa13.16□□□□□ -0.3
CXXC1-211ENST00000589548 CXorf58Q96LI9 332 aa13.16□□□□□ -0.3
CXXC1-211ENST00000589548 A0A1B0GVY2 172 aa13.15□□□□□ -0.3
CXXC1-211ENST00000589548 HLA-DQB1P01920 261 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms