RNA–Protein interactions for RNA: ENST00000589445.1

R3HDM4-205, Transcript of R3H domain containing 4, humanhuman

TSL 3

Gene R3HDM4, Length 705 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4-205ENST00000589445 TMEM230Q96A57 120 aa17.71■□□□□ 0.43
R3HDM4-205ENST00000589445 FAM103A1Q9BTL3 118 aaKnown RBP17.71■□□□□ 0.43
R3HDM4-205ENST00000589445 ZNF430Q9H8G1 570 aaPredicted RBP17.71■□□□□ 0.43
R3HDM4-205ENST00000589445 TENM1Q9UKZ4 2725 aa17.7■□□□□ 0.42
R3HDM4-205ENST00000589445 PSMB11A5LHX3 300 aa17.7■□□□□ 0.42
R3HDM4-205ENST00000589445 AKR1C2P52895 323 aa17.7■□□□□ 0.42
R3HDM4-205ENST00000589445 MZT2BQ6NZ67 158 aa17.7■□□□□ 0.42
R3HDM4-205ENST00000589445 CENPVQ7Z7K6 275 aaPredicted RBP17.7■□□□□ 0.42
R3HDM4-205ENST00000589445 MMD2Q8IY49 270 aa17.7■□□□□ 0.42
R3HDM4-205ENST00000589445 STPG2Q8N412 459 aa17.7■□□□□ 0.42
R3HDM4-205ENST00000589445 RNASE11Q8TAA1 199 aaKnown RBP17.7■□□□□ 0.42
R3HDM4-205ENST00000589445 CHPT1Q8WUD6 406 aa17.7■□□□□ 0.42
R3HDM4-205ENST00000589445 TSC22D3Q99576 134 aa17.7■□□□□ 0.42
R3HDM4-205ENST00000589445 FAM212BQ9NTI7 297 aaPredicted RBP17.7■□□□□ 0.42
R3HDM4-205ENST00000589445 TBC1D24Q9ULP9 559 aa17.7■□□□□ 0.42
R3HDM4-205ENST00000589445 ANK2Q01484 3957 aa17.69■□□□□ 0.42
R3HDM4-205ENST00000589445 VAMP1P23763 118 aa17.69■□□□□ 0.42
R3HDM4-205ENST00000589445 SRSF4Q08170 494 aaKnown RBP17.69■□□□□ 0.42
R3HDM4-205ENST00000589445 FXYD3Q14802 87 aa17.69■□□□□ 0.42
R3HDM4-205ENST00000589445 PUSL1Q8N0Z8 303 aaKnown RBP17.69■□□□□ 0.42
R3HDM4-205ENST00000589445 TMEM167AQ8TBQ9 72 aa17.69■□□□□ 0.42
R3HDM4-205ENST00000589445 WNT10AQ9GZT5 417 aa17.69■□□□□ 0.42
R3HDM4-205ENST00000589445 PRR13Q9NZ81 148 aa17.69■□□□□ 0.42
R3HDM4-205ENST00000589445 FBXO7Q9Y3I1 522 aa17.69■□□□□ 0.42
R3HDM4-205ENST00000589445 WSB1Q9Y6I7 421 aa17.69■□□□□ 0.42
R3HDM4-205ENST00000589445 ARPC1BO15143 372 aaKnown RBP17.68■□□□□ 0.42
R3HDM4-205ENST00000589445 UCP1P25874 307 aa17.68■□□□□ 0.42
R3HDM4-205ENST00000589445 SLC35B1P78383 322 aa17.68■□□□□ 0.42
R3HDM4-205ENST00000589445 ASAH1Q13510 395 aa17.68■□□□□ 0.42
R3HDM4-205ENST00000589445 POU2AF1Q16633 256 aa17.68■□□□□ 0.42
R3HDM4-205ENST00000589445 C10orf55Q5SWW7 151 aa17.68■□□□□ 0.42
R3HDM4-205ENST00000589445 C10orf99Q6UWK7 81 aa17.68■□□□□ 0.42
R3HDM4-205ENST00000589445 ZNF329Q86UD4 541 aa17.68■□□□□ 0.42
R3HDM4-205ENST00000589445 PHB2Q99623 299 aa17.68■□□□□ 0.42
R3HDM4-205ENST00000589445 C20orf85Q9H1P6 137 aa17.68■□□□□ 0.42
R3HDM4-205ENST00000589445 BET1LQ9NYM9 111 aa17.68■□□□□ 0.42
R3HDM4-205ENST00000589445 FLVCR2Q9UPI3 526 aa17.68■□□□□ 0.42
R3HDM4-205ENST00000589445 TRAV41A0A0B4J266 112 aa17.67■□□□□ 0.42
R3HDM4-205ENST00000589445 FBXO24O75426 580 aa17.67■□□□□ 0.42
R3HDM4-205ENST00000589445 B3GALNT1O75752 331 aa17.67■□□□□ 0.42
R3HDM4-205ENST00000589445 IGKV1-39P01597 117 aa17.67■□□□□ 0.42
R3HDM4-205ENST00000589445 IGKV1D-39P04432 117 aa17.67■□□□□ 0.42
R3HDM4-205ENST00000589445 IFITM3Q01628 133 aa17.67■□□□□ 0.42
R3HDM4-205ENST00000589445 KHDC1LQ5JSQ8 128 aa17.67■□□□□ 0.42
R3HDM4-205ENST00000589445 HIST2H2BDQ6DRA6 164 aa17.67■□□□□ 0.42
R3HDM4-205ENST00000589445 ZNF562Q6V9R5 426 aa17.67■□□□□ 0.42
R3HDM4-205ENST00000589445 OR4X2Q8NGF9 303 aa17.67■□□□□ 0.42
R3HDM4-205ENST00000589445 OR4A5Q8NH83 315 aa17.67■□□□□ 0.42
R3HDM4-205ENST00000589445 ENKURQ8TC29 256 aa17.67■□□□□ 0.42
R3HDM4-205ENST00000589445 TMEM222Q9H0R3 208 aa17.67■□□□□ 0.42
R3HDM4-205ENST00000589445 TET2Q6N021 2002 aaPredicted RBP17.66■□□□□ 0.42
R3HDM4-205ENST00000589445 FAM240BA0A1B0GVZ2 78 aa17.66■□□□□ 0.42
R3HDM4-205ENST00000589445 G3V318 75 aa17.66■□□□□ 0.42
R3HDM4-205ENST00000589445 IGF1P05019 195 aa17.66■□□□□ 0.42
R3HDM4-205ENST00000589445 APELAP0DMC3 54 aa17.66■□□□□ 0.42
R3HDM4-205ENST00000589445 ANXA3P12429 323 aa17.66■□□□□ 0.42
R3HDM4-205ENST00000589445 OR2B8PP59922 312 aa17.66■□□□□ 0.42
R3HDM4-205ENST00000589445 KRTAP10-3P60369 221 aa17.66■□□□□ 0.42
R3HDM4-205ENST00000589445 RPL8P62917 257 aaKnown RBP17.66■□□□□ 0.42
R3HDM4-205ENST00000589445 SSBP2P81877 361 aaPredicted RBP17.66■□□□□ 0.42
R3HDM4-205ENST00000589445 DHODHQ02127 395 aa17.66■□□□□ 0.42
R3HDM4-205ENST00000589445 MRGPRG-AS1Q2M3A8 158 aa17.66■□□□□ 0.42
R3HDM4-205ENST00000589445 H2BFWTQ7Z2G1 175 aa17.66■□□□□ 0.42
R3HDM4-205ENST00000589445 OR5AU1Q8NGC0 362 aa17.66■□□□□ 0.42
R3HDM4-205ENST00000589445 SRSF12Q8WXF0 261 aaKnown RBP17.66■□□□□ 0.42
R3HDM4-205ENST00000589445 GON7Q9BXV9 100 aa17.66■□□□□ 0.42
R3HDM4-205ENST00000589445 KCNIP3Q9Y2W7 256 aa17.66■□□□□ 0.42
R3HDM4-205ENST00000589445 TRAV6A0A075B6T7 132 aa17.65■□□□□ 0.42
R3HDM4-205ENST00000589445 TRAV3A0A0B4J244 114 aa17.65■□□□□ 0.42
R3HDM4-205ENST00000589445 ATG12O94817 140 aa17.65■□□□□ 0.42
R3HDM4-205ENST00000589445 OPN1MWP04001 364 aa17.65■□□□□ 0.42
R3HDM4-205ENST00000589445 OPN1MW2P0DN77 364 aa17.65■□□□□ 0.42
R3HDM4-205ENST00000589445 OPN1MW3P0DN78 364 aa17.65■□□□□ 0.42
R3HDM4-205ENST00000589445 MYOD1P15172 320 aa17.65■□□□□ 0.42
R3HDM4-205ENST00000589445 HLA-GP17693 338 aa17.65■□□□□ 0.42
R3HDM4-205ENST00000589445 DEFA1P59665 94 aa17.65■□□□□ 0.42
R3HDM4-205ENST00000589445 DEFA3P59666 94 aa17.65■□□□□ 0.42
R3HDM4-205ENST00000589445 TMEM128Q5BJH2 165 aa17.65■□□□□ 0.42
R3HDM4-205ENST00000589445 TMEM268Q5VZI3 342 aa17.65■□□□□ 0.42
R3HDM4-205ENST00000589445 UNQ5815/PRO19632Q6UWF5 114 aa17.65■□□□□ 0.42
R3HDM4-205ENST00000589445 ZNF695Q8IW36 515 aa17.65■□□□□ 0.42
R3HDM4-205ENST00000589445 ZNF747Q9BV97 191 aa17.65■□□□□ 0.42
R3HDM4-205ENST00000589445 NUDT15Q9NV35 164 aa17.65■□□□□ 0.42
R3HDM4-205ENST00000589445 A0A1W2PN81 502 aa17.64■□□□□ 0.41
R3HDM4-205ENST00000589445 UPK2O00526 184 aa17.64■□□□□ 0.41
R3HDM4-205ENST00000589445 SNAPC5O75971 98 aa17.64■□□□□ 0.41
R3HDM4-205ENST00000589445 CD28P10747 220 aa17.64■□□□□ 0.41
R3HDM4-205ENST00000589445 ANXA7P20073 488 aaKnown RBP17.64■□□□□ 0.41
R3HDM4-205ENST00000589445 SLC6A1P30531 599 aa17.64■□□□□ 0.41
R3HDM4-205ENST00000589445 CHRNA7P36544 502 aa17.64■□□□□ 0.41
R3HDM4-205ENST00000589445 RPL27AP46776 148 aaKnown RBP17.64■□□□□ 0.41
R3HDM4-205ENST00000589445 SUPT4H1P63272 117 aaKnown RBP17.64■□□□□ 0.41
R3HDM4-205ENST00000589445 PPP1R1AQ13522 171 aa17.64■□□□□ 0.41
R3HDM4-205ENST00000589445 LFNGQ8NES3 379 aa17.64■□□□□ 0.41
R3HDM4-205ENST00000589445 SGMS2Q8NHU3 365 aa17.64■□□□□ 0.41
R3HDM4-205ENST00000589445 LHFPL5Q8TAF8 219 aa17.64■□□□□ 0.41
R3HDM4-205ENST00000589445 CASTOR1Q8WTX7 329 aa17.64■□□□□ 0.41
R3HDM4-205ENST00000589445 SEC22AQ96IW7 307 aa17.64■□□□□ 0.41
R3HDM4-205ENST00000589445 FYTTD1Q96QD9 318 aaKnown RBP17.64■□□□□ 0.41
R3HDM4-205ENST00000589445 NSG2Q9Y328 171 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms