RNA–Protein interactions for RNA: ENST00000588781.1

SPIDR-228, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 5

Gene SPIDR, Length 164 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-228ENST00000588781 NPVFQ9HCQ7 196 aa5.95□□□□□ -1.46
SPIDR-228ENST00000588781 NGBQ9NPG2 151 aa5.95□□□□□ -1.46
SPIDR-228ENST00000588781 GAR1Q9NY12 217 aaKnown RBP5.95□□□□□ -1.46
SPIDR-228ENST00000588781 IDI2-AS1Q9NZ38 188 aa5.95□□□□□ -1.46
SPIDR-228ENST00000588781 FOXA2Q9Y261 457 aaPredicted RBP5.95□□□□□ -1.46
SPIDR-228ENST00000588781 ZNF257Q9Y2Q1 563 aa5.95□□□□□ -1.46
SPIDR-228ENST00000588781 ARL2-SNX15V9GYD0 113 aa5.95□□□□□ -1.46
SPIDR-228ENST00000588781 ZNF462Q96JM2 2506 aa5.95□□□□□ -1.46
SPIDR-228ENST00000588781 AHCTF1Q8WYP5 2266 aa5.95□□□□□ -1.46
SPIDR-228ENST00000588781 MED13Q9UHV7 2174 aa5.94□□□□□ -1.46
SPIDR-228ENST00000588781 USP9XQ93008 2570 aaPredicted RBP5.94□□□□□ -1.46
SPIDR-228ENST00000588781 TRAV38-1A0A0B4J264 116 aa5.94□□□□□ -1.46
SPIDR-228ENST00000588781 C15orf61A6NNL5 157 aa5.94□□□□□ -1.46
SPIDR-228ENST00000588781 LINC00473A8K010 186 aa5.94□□□□□ -1.46
SPIDR-228ENST00000588781 DEFB108AA8MXU0 73 aa5.94□□□□□ -1.46
SPIDR-228ENST00000588781 C11orf94C9JXX5 98 aa5.94□□□□□ -1.46
SPIDR-228ENST00000588781 PPP5D1E7EU14 171 aa5.94□□□□□ -1.46
SPIDR-228ENST00000588781 PRRG2O14669 202 aa5.94□□□□□ -1.46
SPIDR-228ENST00000588781 HMGB3O15347 200 aaKnown RBP5.94□□□□□ -1.46
SPIDR-228ENST00000588781 SPRY3O43610 288 aa5.94□□□□□ -1.46
SPIDR-228ENST00000588781 CLN5O75503 358 aa5.94□□□□□ -1.46
SPIDR-228ENST00000588781 WISP2O76076 250 aa5.94□□□□□ -1.46
SPIDR-228ENST00000588781 APOA2P02652 100 aa5.94□□□□□ -1.46
SPIDR-228ENST00000588781 FBP1P09467 338 aa5.94□□□□□ -1.46
SPIDR-228ENST00000588781 EGR1P18146 543 aa5.94□□□□□ -1.46
SPIDR-228ENST00000588781 NPY1RP25929 384 aa5.94□□□□□ -1.46
SPIDR-228ENST00000588781 NDUFA6P56556 154 aa5.94□□□□□ -1.46
SPIDR-228ENST00000588781 FAM3BP58499 235 aaPredicted RBP5.94□□□□□ -1.46
SPIDR-228ENST00000588781 HSPE1P61604 102 aaKnown RBP5.94□□□□□ -1.46
SPIDR-228ENST00000588781 RHOBP62745 196 aa5.94□□□□□ -1.46
SPIDR-228ENST00000588781 MRPS11P82912 194 aaKnown RBP5.94□□□□□ -1.46
SPIDR-228ENST00000588781 LTC4SQ16873 150 aa5.94□□□□□ -1.46
SPIDR-228ENST00000588781 STUMQ69YW2 141 aa5.94□□□□□ -1.46
SPIDR-228ENST00000588781 FAM71F2Q6NXP2 309 aa5.94□□□□□ -1.46
SPIDR-228ENST00000588781 MRPL41Q8IXM3 137 aaKnown RBP5.94□□□□□ -1.46
SPIDR-228ENST00000588781 UHRF2Q96PU4 802 aa5.94□□□□□ -1.46
SPIDR-228ENST00000588781 RNF2Q99496 336 aa5.94□□□□□ -1.46
SPIDR-228ENST00000588781 C19orf24Q9BVV8 132 aa5.94□□□□□ -1.46
SPIDR-228ENST00000588781 IFI27L2Q9H2X8 130 aa5.94□□□□□ -1.46
SPIDR-228ENST00000588781 PARLQ9H300 379 aa5.94□□□□□ -1.46
SPIDR-228ENST00000588781 LINC00574Q9H8X3 128 aa5.94□□□□□ -1.46
SPIDR-228ENST00000588781 TMEM140Q9NV12 185 aa5.94□□□□□ -1.46
SPIDR-228ENST00000588781 DOK5Q9P104 306 aa5.94□□□□□ -1.46
SPIDR-228ENST00000588781 METRNQ9UJH8 293 aa5.94□□□□□ -1.46
SPIDR-228ENST00000588781 PITPNC1Q9UKF7 332 aa5.94□□□□□ -1.46
SPIDR-228ENST00000588781 TCF19Q9Y242 345 aa5.94□□□□□ -1.46
SPIDR-228ENST00000588781 ESPL1Q14674 2120 aa5.93□□□□□ -1.46
SPIDR-228ENST00000588781 TRAV9-1A0A075B6T8 112 aa5.93□□□□□ -1.46
SPIDR-228ENST00000588781 GYPAP02724 150 aa5.93□□□□□ -1.46
SPIDR-228ENST00000588781 FABP1P07148 127 aa5.93□□□□□ -1.46
SPIDR-228ENST00000588781 CD55P08174 381 aa5.93□□□□□ -1.46
SPIDR-228ENST00000588781 CXCL1P09341 107 aa5.93□□□□□ -1.46
SPIDR-228ENST00000588781 OR9G9P0C7N8 305 aa5.93□□□□□ -1.46
SPIDR-228ENST00000588781 CGB3P0DN86 165 aa5.93□□□□□ -1.46
SPIDR-228ENST00000588781 CGB7P0DN87 165 aa5.93□□□□□ -1.46
SPIDR-228ENST00000588781 CD40P25942 277 aa5.93□□□□□ -1.46
SPIDR-228ENST00000588781 VDAC2P45880 294 aaPredicted RBP5.93□□□□□ -1.46
SPIDR-228ENST00000588781 GALR1P47211 349 aa5.93□□□□□ -1.46
SPIDR-228ENST00000588781 LOXL3P58215 753 aa5.93□□□□□ -1.46
SPIDR-228ENST00000588781 BRWD1-AS2P59051 145 aa5.93□□□□□ -1.46
SPIDR-228ENST00000588781 B2MP61769 119 aa5.93□□□□□ -1.46
SPIDR-228ENST00000588781 RPL23P62829 140 aaKnown RBP5.93□□□□□ -1.46
SPIDR-228ENST00000588781 LCN2P80188 198 aa5.93□□□□□ -1.46
SPIDR-228ENST00000588781 RELBQ01201 579 aa5.93□□□□□ -1.46
SPIDR-228ENST00000588781 RBPJQ06330 500 aa5.93□□□□□ -1.46
SPIDR-228ENST00000588781 TFF3Q07654 80 aa5.93□□□□□ -1.46
SPIDR-228ENST00000588781 TEX36Q5VZQ5 186 aa5.93□□□□□ -1.46
SPIDR-228ENST00000588781 ZNF474Q6S9Z5 364 aaPredicted RBP5.93□□□□□ -1.46
SPIDR-228ENST00000588781 TEPPQ6URK8 271 aa5.93□□□□□ -1.46
SPIDR-228ENST00000588781 SEM1Q6ZVN7 128 aa5.93□□□□□ -1.46
SPIDR-228ENST00000588781 C16orf82Q7Z2V1 217 aa5.93□□□□□ -1.46
SPIDR-228ENST00000588781 TPRX1Q8N7U7 411 aa5.93□□□□□ -1.46
SPIDR-228ENST00000588781 SLC24A4Q8NFF2 622 aa5.93□□□□□ -1.46
SPIDR-228ENST00000588781 OR4A5Q8NH83 315 aa5.93□□□□□ -1.46
SPIDR-228ENST00000588781 DDB2Q92466 427 aa5.93□□□□□ -1.46
SPIDR-228ENST00000588781 ZDHHC16Q969W1 377 aa5.93□□□□□ -1.46
SPIDR-228ENST00000588781 RPUSD4Q96CM3 377 aaKnown RBP5.93□□□□□ -1.46
SPIDR-228ENST00000588781 ACY3Q96HD9 319 aa5.93□□□□□ -1.46
SPIDR-228ENST00000588781 SLC35E1Q96K37 410 aa5.93□□□□□ -1.46
SPIDR-228ENST00000588781 PFDN5Q99471 154 aa5.93□□□□□ -1.46
SPIDR-228ENST00000588781 PYGO2Q9BRQ0 406 aa5.93□□□□□ -1.46
SPIDR-228ENST00000588781 PLEKHA3Q9HB20 300 aa5.93□□□□□ -1.46
SPIDR-228ENST00000588781 NIT2Q9NQR4 276 aa5.93□□□□□ -1.46
SPIDR-228ENST00000588781 TP53TG5Q9Y2B4 290 aa5.93□□□□□ -1.46
SPIDR-228ENST00000588781 LINC00312Q9Y6C7 94 aa5.93□□□□□ -1.46
SPIDR-228ENST00000588781 URGCP-MRPS24S4R325 110 aa5.93□□□□□ -1.46
SPIDR-228ENST00000588781 ARID1AO14497 2285 aa5.93□□□□□ -1.46
SPIDR-228ENST00000588781 ACACAQ13085 2346 aa5.93□□□□□ -1.46
SPIDR-228ENST00000588781 DOCK7Q96N67 2140 aa5.92□□□□□ -1.46
SPIDR-228ENST00000588781 IGHV3OR15-7A0A075B7D8 119 aa5.92□□□□□ -1.46
SPIDR-228ENST00000588781 TGIF2-C20orf24A0A0A6YYL0 155 aa5.92□□□□□ -1.46
SPIDR-228ENST00000588781 MDFIC2A0A1B0GVS7 189 aa5.92□□□□□ -1.46
SPIDR-228ENST00000588781 A0A1W2PN81 502 aa5.92□□□□□ -1.46
SPIDR-228ENST00000588781 A8MXE2 369 aa5.92□□□□□ -1.46
SPIDR-228ENST00000588781 C3orf80F5H4A9 247 aa5.92□□□□□ -1.46
SPIDR-228ENST00000588781 C16orf97H3BN30 126 aa5.92□□□□□ -1.46
SPIDR-228ENST00000588781 TMPRSS2O15393 492 aa5.92□□□□□ -1.46
SPIDR-228ENST00000588781 PAGE4O60829 102 aa5.92□□□□□ -1.46
SPIDR-228ENST00000588781 IGHV1-46P01743 117 aa5.92□□□□□ -1.46
SPIDR-228ENST00000588781 TRGC2P03986 189 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms