RNA–Protein interactions for RNA: ENST00000588720.1

BCAS3-220, Transcript of BCAS3, microtubule associated cell migration factor, humanhuman

Gene BCAS3, Length 4,556 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BCAS3-220ENST00000588720 ONECUT1Q9UBC0 465 aa9.74□□□□□ -0.85
BCAS3-220ENST00000588720 C5orf63A6NC05 138 aa9.74□□□□□ -0.85
BCAS3-220ENST00000588720 RNF222A6NCQ9 220 aa9.74□□□□□ -0.85
BCAS3-220ENST00000588720 C10orf142B7Z368 130 aa9.74□□□□□ -0.85
BCAS3-220ENST00000588720 C1QL1O75973 258 aa9.74□□□□□ -0.85
BCAS3-220ENST00000588720 IL18BPO95998 194 aa9.74□□□□□ -0.85
BCAS3-220ENST00000588720 HPRT1P00492 218 aa9.74□□□□□ -0.85
BCAS3-220ENST00000588720 ZNF735P0CB33 412 aa9.74□□□□□ -0.85
BCAS3-220ENST00000588720 PNKDQ8N490 385 aa9.74□□□□□ -0.85
BCAS3-220ENST00000588720 GCSAMQ8N6F7 178 aa9.74□□□□□ -0.85
BCAS3-220ENST00000588720 POC1AQ8NBT0 407 aa9.74□□□□□ -0.85
BCAS3-220ENST00000588720 VSTM2AQ8TAG5 236 aa9.74□□□□□ -0.85
BCAS3-220ENST00000588720 AUP1Q9Y679 476 aa9.74□□□□□ -0.85
BCAS3-220ENST00000588720 C11orf94C9JXX5 98 aa9.74□□□□□ -0.85
BCAS3-220ENST00000588720 CA2P00918 260 aa9.74□□□□□ -0.85
BCAS3-220ENST00000588720 HINT1P49773 126 aaPredicted RBP9.74□□□□□ -0.85
BCAS3-220ENST00000588720 SRSF6Q13247 344 aaKnown RBP9.74□□□□□ -0.85
BCAS3-220ENST00000588720 TMEM187Q14656 261 aa9.74□□□□□ -0.85
BCAS3-220ENST00000588720 SLC35E4Q6ICL7 350 aa9.74□□□□□ -0.85
BCAS3-220ENST00000588720 ZNF645Q8N7E2 425 aa9.74□□□□□ -0.85
BCAS3-220ENST00000588720 ALPK3Q96L96 1907 aa9.74□□□□□ -0.85
BCAS3-220ENST00000588720 GYPAP02724 150 aa9.73□□□□□ -0.85
BCAS3-220ENST00000588720 APCSP02743 223 aa9.73□□□□□ -0.85
BCAS3-220ENST00000588720 Q1RN00 199 aa9.73□□□□□ -0.85
BCAS3-220ENST00000588720 C16orf82Q7Z2V1 217 aa9.73□□□□□ -0.85
BCAS3-220ENST00000588720 DTX1Q86Y01 620 aa9.73□□□□□ -0.85
BCAS3-220ENST00000588720 SNURFLB1AK76 121 aa9.73□□□□□ -0.85
BCAS3-220ENST00000588720 ATP6V0CP27449 155 aa9.73□□□□□ -0.85
BCAS3-220ENST00000588720 ID4P47928 161 aa9.73□□□□□ -0.85
BCAS3-220ENST00000588720 ZNF818PQ6ZRF7 136 aa9.73□□□□□ -0.85
BCAS3-220ENST00000588720 SPACA3Q8IXA5 215 aa9.73□□□□□ -0.85
BCAS3-220ENST00000588720 ZCCHC14Q8WYQ9 949 aaKnown RBP9.73□□□□□ -0.85
BCAS3-220ENST00000588720 SIGMAR1Q99720 223 aa9.73□□□□□ -0.85
BCAS3-220ENST00000588720 PLSCR4Q9NRQ2 329 aa9.73□□□□□ -0.85
BCAS3-220ENST00000588720 ZNF355PQ9NSJ1 428 aa9.73□□□□□ -0.85
BCAS3-220ENST00000588720 RAB29O14966 203 aa9.73□□□□□ -0.85
BCAS3-220ENST00000588720 ORM1P02763 201 aa9.73□□□□□ -0.85
BCAS3-220ENST00000588720 HKR1P10072 659 aa9.73□□□□□ -0.85
BCAS3-220ENST00000588720 CD40P25942 277 aa9.73□□□□□ -0.85
BCAS3-220ENST00000588720 HTR1DP28221 377 aa9.73□□□□□ -0.85
BCAS3-220ENST00000588720 KIR2DL2P43627 348 aaPredicted RBP9.73□□□□□ -0.85
BCAS3-220ENST00000588720 HERVK_113P61574 105 aa9.73□□□□□ -0.85
BCAS3-220ENST00000588720 RIGQ13278 110 aa9.73□□□□□ -0.85
BCAS3-220ENST00000588720 ACP7Q6ZNF0 438 aa9.73□□□□□ -0.85
BCAS3-220ENST00000588720 OR8B3Q8NGG8 313 aa9.73□□□□□ -0.85
BCAS3-220ENST00000588720 SMIM8Q96KF7 97 aa9.73□□□□□ -0.85
BCAS3-220ENST00000588720 OR8B2Q96RD0 313 aa9.73□□□□□ -0.85
BCAS3-220ENST00000588720 RTBDNQ9BSG5 229 aaPredicted RBP9.73□□□□□ -0.85
BCAS3-220ENST00000588720 ABHD14AQ9BUJ0 271 aa9.73□□□□□ -0.85
BCAS3-220ENST00000588720 WNT9BO14905 357 aa9.73□□□□□ -0.85
BCAS3-220ENST00000588720 WNT5AP41221 380 aa9.73□□□□□ -0.85
BCAS3-220ENST00000588720 FGF8P55075 233 aaPredicted RBP9.73□□□□□ -0.85
BCAS3-220ENST00000588720 TMEM42Q69YG0 159 aa9.73□□□□□ -0.85
BCAS3-220ENST00000588720 PIP4P1Q86T03 277 aa9.73□□□□□ -0.85
BCAS3-220ENST00000588720 ZNF256Q9Y2P7 627 aaPredicted RBP9.73□□□□□ -0.85
BCAS3-220ENST00000588720 AMMECR1Q9Y4X0 333 aaPredicted RBP9.73□□□□□ -0.85
BCAS3-220ENST00000588720 IGKV1-12A0A0C4DH73 117 aa9.72□□□□□ -0.85
BCAS3-220ENST00000588720 DKK1O94907 266 aa9.72□□□□□ -0.85
BCAS3-220ENST00000588720 IGKV1D-12P01611 117 aa9.72□□□□□ -0.85
BCAS3-220ENST00000588720 HIST1H1EP10412 219 aaKnown RBP9.72□□□□□ -0.85
BCAS3-220ENST00000588720 SPINK9Q5DT21 86 aa9.72□□□□□ -0.85
BCAS3-220ENST00000588720 CYB561D1Q8N8Q1 229 aa9.72□□□□□ -0.85
BCAS3-220ENST00000588720 MRPL37Q9BZE1 423 aaKnown RBP9.72□□□□□ -0.85
BCAS3-220ENST00000588720 HIF1ANQ9NWT6 349 aa9.72□□□□□ -0.85
BCAS3-220ENST00000588720 RNFT1Q5M7Z0 435 aa9.72□□□□□ -0.85
BCAS3-220ENST00000588720 MRPL54Q6P161 138 aaKnown RBP9.72□□□□□ -0.85
BCAS3-220ENST00000588720 TMEM252Q8N6L7 170 aa9.72□□□□□ -0.85
BCAS3-220ENST00000588720 HELTA6NFD8 242 aa9.72□□□□□ -0.85
BCAS3-220ENST00000588720 FOXF2Q12947 444 aa9.72□□□□□ -0.85
BCAS3-220ENST00000588720 ZNF506Q5JVG8 444 aa9.72□□□□□ -0.85
BCAS3-220ENST00000588720 SELENOHQ8IZQ5 122 aaKnown RBP9.72□□□□□ -0.85
BCAS3-220ENST00000588720 TMEM242Q9NWH2 141 aa9.72□□□□□ -0.85
BCAS3-220ENST00000588720 IL36RNQ9UBH0 155 aa9.72□□□□□ -0.85
BCAS3-220ENST00000588720 DOCK7Q96N67 2140 aa9.72□□□□□ -0.85
BCAS3-220ENST00000588720 MPDU1O75352 247 aa9.72□□□□□ -0.85
BCAS3-220ENST00000588720 COX7A1P24310 79 aa9.72□□□□□ -0.85
BCAS3-220ENST00000588720 TIMP3P35625 211 aa9.72□□□□□ -0.85
BCAS3-220ENST00000588720 QRFPP83859 136 aa9.72□□□□□ -0.85
BCAS3-220ENST00000588720 SGMS2Q8NHU3 365 aa9.72□□□□□ -0.85
BCAS3-220ENST00000588720 GPHA2Q96T91 129 aa9.72□□□□□ -0.85
BCAS3-220ENST00000588720 CALYQ9NYX4 217 aa9.72□□□□□ -0.85
BCAS3-220ENST00000588720 AGAP20933 346 aa9.71□□□□□ -0.85
BCAS3-220ENST00000588720 CEACAM3P40198 252 aa9.71□□□□□ -0.85
BCAS3-220ENST00000588720 RTP5Q14D33 572 aa9.71□□□□□ -0.85
BCAS3-220ENST00000588720 CLN8Q9UBY8 286 aa9.71□□□□□ -0.85
BCAS3-220ENST00000588720 JPT1Q9UK76 154 aa9.71□□□□□ -0.85
BCAS3-220ENST00000588720 LAMTOR2Q9Y2Q5 125 aa9.71□□□□□ -0.85
BCAS3-220ENST00000588720 RNF115Q9Y4L5 304 aa9.71□□□□□ -0.85
BCAS3-220ENST00000588720 TMEM262E9PQX1 116 aa9.71□□□□□ -0.86
BCAS3-220ENST00000588720 MEF2BQ02080 365 aaPredicted RBP9.71□□□□□ -0.86
BCAS3-220ENST00000588720 GAGE1Q13065 139 aa9.71□□□□□ -0.86
BCAS3-220ENST00000588720 CXorf66Q5JRM2 361 aaPredicted RBP9.71□□□□□ -0.86
BCAS3-220ENST00000588720 Q6ZS92 163 aa9.71□□□□□ -0.86
BCAS3-220ENST00000588720 STXBP6Q8NFX7 210 aa9.71□□□□□ -0.86
BCAS3-220ENST00000588720 OR1L4Q8NGR5 311 aa9.71□□□□□ -0.86
BCAS3-220ENST00000588720 SLC25A33Q9BSK2 321 aa9.71□□□□□ -0.86
BCAS3-220ENST00000588720 PRNDQ9UKY0 176 aa9.71□□□□□ -0.86
BCAS3-220ENST00000588720 IGKV1-27A0A075B6S5 117 aa9.71□□□□□ -0.86
BCAS3-220ENST00000588720 H0YL77 283 aa9.71□□□□□ -0.86
BCAS3-220ENST00000588720 HLA-DRB1P01911 266 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms