RNA–Protein interactions for RNA: ENST00000588555.1

SCAMP4-210, Transcript of secretory carrier membrane protein 4, humanhuman

Gene SCAMP4, Length 1,785 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-210ENST00000588555 ARL6Q9H0F7 186 aa20.95■□□□□ 0.94
SCAMP4-210ENST00000588555 A0A0D9SG52 128 aa20.95■□□□□ 0.94
SCAMP4-210ENST00000588555 WRBO00258 174 aa20.95■□□□□ 0.94
SCAMP4-210ENST00000588555 P2RY1P47900 373 aa20.95■□□□□ 0.94
SCAMP4-210ENST00000588555 RPS16P62249 146 aaKnown RBP20.95■□□□□ 0.94
SCAMP4-210ENST00000588555 IFITM2Q01629 132 aa20.95■□□□□ 0.94
SCAMP4-210ENST00000588555 SSX2Q16385 188 aa20.95■□□□□ 0.94
SCAMP4-210ENST00000588555 OR4A16Q8NH70 328 aa20.95■□□□□ 0.94
SCAMP4-210ENST00000588555 BET1LQ9NYM9 111 aa20.95■□□□□ 0.94
SCAMP4-210ENST00000588555 C15orf61A6NNL5 157 aa20.94■□□□□ 0.94
SCAMP4-210ENST00000588555 SAA4P35542 130 aa20.94■□□□□ 0.94
SCAMP4-210ENST00000588555 UBE2KP61086 200 aa20.94■□□□□ 0.94
SCAMP4-210ENST00000588555 OPCMLQ14982 345 aa20.94■□□□□ 0.94
SCAMP4-210ENST00000588555 ZNF429Q86V71 674 aa20.94■□□□□ 0.94
SCAMP4-210ENST00000588555 PIP4P2Q8N4L2 257 aa20.94■□□□□ 0.94
SCAMP4-210ENST00000588555 C7orf69Q9H7B7 122 aa20.94■□□□□ 0.94
SCAMP4-210ENST00000588555 NPFFO15130 113 aa20.93■□□□□ 0.94
SCAMP4-210ENST00000588555 RBMXL2O75526 392 aaKnown RBP20.93■□□□□ 0.94
SCAMP4-210ENST00000588555 PVALBP20472 110 aaPredicted RBP20.93■□□□□ 0.94
SCAMP4-210ENST00000588555 CD1BP29016 333 aa20.93■□□□□ 0.94
SCAMP4-210ENST00000588555 RPL12P30050 165 aaKnown RBP20.93■□□□□ 0.94
SCAMP4-210ENST00000588555 LGALS7P47929 136 aa20.93■□□□□ 0.94
SCAMP4-210ENST00000588555 CCDC144NLQ6NUI1 221 aa20.93■□□□□ 0.94
SCAMP4-210ENST00000588555 RAB40CQ96S21 281 aa20.93■□□□□ 0.94
SCAMP4-210ENST00000588555 RBKSQ9H477 322 aa20.93■□□□□ 0.94
SCAMP4-210ENST00000588555 TMEM14BQ9NUH8 114 aa20.93■□□□□ 0.94
SCAMP4-210ENST00000588555 UPK2O00526 184 aa20.92■□□□□ 0.94
SCAMP4-210ENST00000588555 VENTXO95231 258 aa20.92■□□□□ 0.94
SCAMP4-210ENST00000588555 IGHV4-31P0DP07 118 aa20.92■□□□□ 0.94
SCAMP4-210ENST00000588555 TMEM249Q2WGJ8 235 aa20.92■□□□□ 0.94
SCAMP4-210ENST00000588555 PDLIM3Q53GG5 364 aaPredicted RBP20.92■□□□□ 0.94
SCAMP4-210ENST00000588555 MALSU1Q96EH3 234 aa20.92■□□□□ 0.94
SCAMP4-210ENST00000588555 FOXA2Q9Y261 457 aaPredicted RBP20.92■□□□□ 0.94
SCAMP4-210ENST00000588555 KBTBD11O94819 623 aa20.92■□□□□ 0.94
SCAMP4-210ENST00000588555 NUP62P37198 522 aaPredicted RBP20.92■□□□□ 0.94
SCAMP4-210ENST00000588555 WFDC11Q8NEX6 87 aa20.92■□□□□ 0.94
SCAMP4-210ENST00000588555 OR52E5Q8NH55 327 aa20.92■□□□□ 0.94
SCAMP4-210ENST00000588555 LYRM2Q9NU23 88 aaPredicted RBP20.92■□□□□ 0.94
SCAMP4-210ENST00000588555 TET2Q6N021 2002 aaPredicted RBP20.91■□□□□ 0.94
SCAMP4-210ENST00000588555 TNCP24821 2201 aa20.91■□□□□ 0.94
SCAMP4-210ENST00000588555 TRAV40A0A0B4J280 105 aa20.91■□□□□ 0.94
SCAMP4-210ENST00000588555 IGHV1-69DA0A0B4J2H0 117 aa20.91■□□□□ 0.94
SCAMP4-210ENST00000588555 IGHV1-69P01742 117 aa20.91■□□□□ 0.94
SCAMP4-210ENST00000588555 C4BPBP20851 252 aa20.91■□□□□ 0.94
SCAMP4-210ENST00000588555 OR2C3Q8N628 320 aa20.91■□□□□ 0.94
SCAMP4-210ENST00000588555 GON7Q9BXV9 100 aa20.91■□□□□ 0.94
SCAMP4-210ENST00000588555 WSB1Q9Y6I7 421 aa20.91■□□□□ 0.94
SCAMP4-210ENST00000588555 IAPPP10997 89 aa20.9■□□□□ 0.94
SCAMP4-210ENST00000588555 VAMP2P63027 116 aa20.9■□□□□ 0.94
SCAMP4-210ENST00000588555 FOXC2Q99958 501 aa20.9■□□□□ 0.94
SCAMP4-210ENST00000588555 ZNF469Q96JG9 3925 aaPredicted RBP20.9■□□□□ 0.94
SCAMP4-210ENST00000588555 TSC22D2O75157 780 aa20.9■□□□□ 0.94
SCAMP4-210ENST00000588555 MED6O75586 246 aa20.9■□□□□ 0.94
SCAMP4-210ENST00000588555 AVPP01185 164 aa20.9■□□□□ 0.94
SCAMP4-210ENST00000588555 GPR157Q5UAW9 335 aa20.9■□□□□ 0.94
SCAMP4-210ENST00000588555 VSTM2AQ8TAG5 236 aa20.9■□□□□ 0.94
SCAMP4-210ENST00000588555 TMEM167AQ8TBQ9 72 aa20.9■□□□□ 0.94
SCAMP4-210ENST00000588555 ZDHHC16Q969W1 377 aa20.9■□□□□ 0.94
SCAMP4-210ENST00000588555 RNF5Q99942 180 aa20.9■□□□□ 0.94
SCAMP4-210ENST00000588555 FAM24AA6NFZ4 105 aa20.89■□□□□ 0.93
SCAMP4-210ENST00000588555 BCL2L11O43521 198 aa20.89■□□□□ 0.93
SCAMP4-210ENST00000588555 GPR137BO60478 399 aa20.89■□□□□ 0.93
SCAMP4-210ENST00000588555 IGHV4-38-2P0DP08 117 aa20.89■□□□□ 0.93
SCAMP4-210ENST00000588555 CNTFRP26992 372 aa20.89■□□□□ 0.93
SCAMP4-210ENST00000588555 TAS2R30P59541 319 aa20.89■□□□□ 0.93
SCAMP4-210ENST00000588555 SPCS3P61009 180 aa20.89■□□□□ 0.93
SCAMP4-210ENST00000588555 SMIM8Q96KF7 97 aa20.89■□□□□ 0.93
SCAMP4-210ENST00000588555 PRNDQ9UKY0 176 aa20.89■□□□□ 0.93
SCAMP4-210ENST00000588555 AKAP9Q99996 3911 aa20.88■□□□□ 0.93
SCAMP4-210ENST00000588555 IGHV3OR16-10A0A075B7F0 116 aa20.88■□□□□ 0.93
SCAMP4-210ENST00000588555 IGSF23A1L1A6 192 aa20.88■□□□□ 0.93
SCAMP4-210ENST00000588555 SLC25A17O43808 307 aa20.88■□□□□ 0.93
SCAMP4-210ENST00000588555 TGFAP01135 160 aa20.88■□□□□ 0.93
SCAMP4-210ENST00000588555 CAV2P51636 162 aa20.88■□□□□ 0.93
SCAMP4-210ENST00000588555 MRGPRG-AS1Q2M3A8 158 aa20.88■□□□□ 0.93
SCAMP4-210ENST00000588555 VMA21Q3ZAQ7 101 aa20.88■□□□□ 0.93
SCAMP4-210ENST00000588555 RUSC1-AS1Q66K80 236 aa20.88■□□□□ 0.93
SCAMP4-210ENST00000588555 OR4A5Q8NH83 315 aa20.88■□□□□ 0.93
SCAMP4-210ENST00000588555 DTD1Q8TEA8 209 aa20.88■□□□□ 0.93
SCAMP4-210ENST00000588555 CACFD1Q9UGQ2 172 aa20.88■□□□□ 0.93
SCAMP4-210ENST00000588555 IFNA17P01571 189 aa20.87■□□□□ 0.93
SCAMP4-210ENST00000588555 CRYGBP07316 175 aa20.87■□□□□ 0.93
SCAMP4-210ENST00000588555 FBLN7Q53RD9 439 aa20.87■□□□□ 0.93
SCAMP4-210ENST00000588555 SPINK9Q5DT21 86 aa20.87■□□□□ 0.93
SCAMP4-210ENST00000588555 TMEM252Q8N6L7 170 aa20.87■□□□□ 0.93
SCAMP4-210ENST00000588555 SLA2Q9H6Q3 261 aa20.87■□□□□ 0.93
SCAMP4-210ENST00000588555 TPSG1Q9NRR2 321 aa20.87■□□□□ 0.93
SCAMP4-210ENST00000588555 TCF19Q9Y242 345 aa20.87■□□□□ 0.93
SCAMP4-210ENST00000588555 H3BP45 60 aa20.87■□□□□ 0.93
SCAMP4-210ENST00000588555 J3QLI3 93 aa20.87■□□□□ 0.93
SCAMP4-210ENST00000588555 IGKV1D-33P01593 117 aa20.87■□□□□ 0.93
SCAMP4-210ENST00000588555 IGKV1-33P01594 117 aa20.87■□□□□ 0.93
SCAMP4-210ENST00000588555 MYOD1P15172 320 aa20.87■□□□□ 0.93
SCAMP4-210ENST00000588555 HSPE1P61604 102 aaKnown RBP20.87■□□□□ 0.93
SCAMP4-210ENST00000588555 RPL23AP62750 156 aaKnown RBP20.87■□□□□ 0.93
SCAMP4-210ENST00000588555 PSG5Q15238 335 aa20.87■□□□□ 0.93
SCAMP4-210ENST00000588555 KLF17Q5JT82 389 aaPredicted RBP20.87■□□□□ 0.93
SCAMP4-210ENST00000588555 TEX45Q8NA69 505 aa20.87■□□□□ 0.93
SCAMP4-210ENST00000588555 BSCL2Q96G97 398 aaPredicted RBP20.87■□□□□ 0.93
SCAMP4-210ENST00000588555 TSNAXQ99598 290 aaKnown RBP20.87■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms