RNA–Protein interactions for RNA: ENST00000587502.2

LSM7-204, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 1 (best) BASIC

Gene LSM7, Length 575 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7-204ENST00000587502 DYRK1AQ13627 763 aa17.98■□□□□ 0.47
LSM7-204ENST00000587502 ACSM6Q6P461 480 aa17.98■□□□□ 0.47
LSM7-204ENST00000587502 IDO2Q6ZQW0 420 aa17.98■□□□□ 0.47
LSM7-204ENST00000587502 MFSD4AQ8N468 514 aa17.98■□□□□ 0.47
LSM7-204ENST00000587502 OR5H2Q8NGV7 314 aa17.98■□□□□ 0.47
LSM7-204ENST00000587502 MCFD2Q8NI22 146 aa17.98■□□□□ 0.47
LSM7-204ENST00000587502 C15orf40Q8WUR7 153 aa17.98■□□□□ 0.47
LSM7-204ENST00000587502 ELOVL1Q9BW60 279 aa17.98■□□□□ 0.47
LSM7-204ENST00000587502 ZNF430Q9H8G1 570 aaPredicted RBP17.98■□□□□ 0.47
LSM7-204ENST00000587502 COA4Q9NYJ1 87 aa17.98■□□□□ 0.47
LSM7-204ENST00000587502 EHFQ9NZC4 300 aa17.98■□□□□ 0.47
LSM7-204ENST00000587502 LSM4Q9Y4Z0 139 aaKnown RBP17.98■□□□□ 0.47
LSM7-204ENST00000587502 COL7A1Q02388 2944 aa17.97■□□□□ 0.47
LSM7-204ENST00000587502 SORL1Q92673 2214 aa17.97■□□□□ 0.47
LSM7-204ENST00000587502 OR9G9P0C7N8 305 aa17.97■□□□□ 0.47
LSM7-204ENST00000587502 HLA-DMAP28067 261 aa17.97■□□□□ 0.47
LSM7-204ENST00000587502 RCVRNP35243 200 aa17.97■□□□□ 0.47
LSM7-204ENST00000587502 EIF4EBP1Q13541 118 aaPredicted RBP17.97■□□□□ 0.47
LSM7-204ENST00000587502 VAX1Q5SQQ9 334 aa17.97■□□□□ 0.47
LSM7-204ENST00000587502 OR6Q1Q8NGQ2 317 aa17.97■□□□□ 0.47
LSM7-204ENST00000587502 OR52I2Q8NH67 350 aa17.97■□□□□ 0.47
LSM7-204ENST00000587502 DIRAS2Q96HU8 199 aa17.97■□□□□ 0.47
LSM7-204ENST00000587502 AIFM2Q9BRQ8 373 aa17.97■□□□□ 0.47
LSM7-204ENST00000587502 KLK11Q9UBX7 282 aa17.97■□□□□ 0.47
LSM7-204ENST00000587502 OR2A4O95047 310 aa17.96■□□□□ 0.47
LSM7-204ENST00000587502 LY86O95711 162 aa17.96■□□□□ 0.47
LSM7-204ENST00000587502 HRH1P35367 487 aa17.96■□□□□ 0.47
LSM7-204ENST00000587502 RNASE12Q5GAN4 147 aaKnown RBP17.96■□□□□ 0.47
LSM7-204ENST00000587502 OR2B11Q5JQS5 317 aa17.96■□□□□ 0.47
LSM7-204ENST00000587502 SECTM1Q8WVN6 248 aa17.96■□□□□ 0.47
LSM7-204ENST00000587502 OR2A7Q96R45 310 aa17.96■□□□□ 0.47
LSM7-204ENST00000587502 OR4C12Q96R67 309 aa17.96■□□□□ 0.47
LSM7-204ENST00000587502 CCL28Q9NRJ3 127 aa17.96■□□□□ 0.47
LSM7-204ENST00000587502 TAS2R8Q9NYW2 309 aa17.96■□□□□ 0.47
LSM7-204ENST00000587502 MTFP1Q9UDX5 166 aa17.96■□□□□ 0.47
LSM7-204ENST00000587502 HRASP01112 189 aa17.95■□□□□ 0.46
LSM7-204ENST00000587502 NHLRC4P0CG21 123 aaPredicted RBP17.95■□□□□ 0.46
LSM7-204ENST00000587502 TNFSF8P32971 234 aa17.95■□□□□ 0.46
LSM7-204ENST00000587502 SLC25A42Q86VD7 318 aa17.95■□□□□ 0.46
LSM7-204ENST00000587502 ADAD2Q8NCV1 583 aaKnown RBP17.95■□□□□ 0.46
LSM7-204ENST00000587502 BORCS5Q969J3 196 aa17.95■□□□□ 0.46
LSM7-204ENST00000587502 MAS1LP35410 378 aa17.94■□□□□ 0.46
LSM7-204ENST00000587502 FXYD4P59646 89 aa17.94■□□□□ 0.46
LSM7-204ENST00000587502 FCAMRQ8WWV6 532 aa17.94■□□□□ 0.46
LSM7-204ENST00000587502 SOSTQ9BQB4 213 aa17.94■□□□□ 0.46
LSM7-204ENST00000587502 ZNF2Q9BSG1 426 aaPredicted RBP17.94■□□□□ 0.46
LSM7-204ENST00000587502 SLC5A7Q9GZV3 580 aa17.94■□□□□ 0.46
LSM7-204ENST00000587502 GABARAPH6UMI1 98 aa17.93■□□□□ 0.46
LSM7-204ENST00000587502 KBTBD11O94819 623 aa17.93■□□□□ 0.46
LSM7-204ENST00000587502 APELAP0DMC3 54 aa17.93■□□□□ 0.46
LSM7-204ENST00000587502 CATR1Q13166 79 aa17.93■□□□□ 0.46
LSM7-204ENST00000587502 ZNF343Q6P1L6 599 aa17.93■□□□□ 0.46
LSM7-204ENST00000587502 TTC9CQ8N5M4 171 aa17.93■□□□□ 0.46
LSM7-204ENST00000587502 OR6F1Q8NGZ6 308 aa17.93■□□□□ 0.46
LSM7-204ENST00000587502 RABL2AQ9UBK7 228 aaPredicted RBP17.93■□□□□ 0.46
LSM7-204ENST00000587502 PEF1Q9UBV8 284 aaKnown RBP17.93■□□□□ 0.46
LSM7-204ENST00000587502 RABL2BQ9UNT1 228 aa17.93■□□□□ 0.46
LSM7-204ENST00000587502 ANKRD34BA5PLL1 514 aa17.92■□□□□ 0.46
LSM7-204ENST00000587502 DPPA5A6NC42 116 aa17.92■□□□□ 0.46
LSM7-204ENST00000587502 FAM223BA6NKX1 122 aa17.92■□□□□ 0.46
LSM7-204ENST00000587502 CTDSPLO15194 276 aa17.92■□□□□ 0.46
LSM7-204ENST00000587502 RBFOX2O43251 390 aaKnown RBP eCLIP17.92■□□□□ 0.46
LSM7-204ENST00000587502 HERV-K104P61576 105 aa17.92■□□□□ 0.46
LSM7-204ENST00000587502 MRPS10P82664 201 aaKnown RBP17.92■□□□□ 0.46
LSM7-204ENST00000587502 IL18Q14116 193 aa17.92■□□□□ 0.46
LSM7-204ENST00000587502 TATDN3Q17R31 274 aa17.92■□□□□ 0.46
LSM7-204ENST00000587502 FAM223AQ8IWN6 122 aa17.92■□□□□ 0.46
LSM7-204ENST00000587502 PUSL1Q8N0Z8 303 aaKnown RBP17.92■□□□□ 0.46
LSM7-204ENST00000587502 TMEM167AQ8TBQ9 72 aa17.92■□□□□ 0.46
LSM7-204ENST00000587502 MOB3AQ96BX8 217 aa17.92■□□□□ 0.46
LSM7-204ENST00000587502 DGCR14Q96DF8 476 aaKnown RBP17.92■□□□□ 0.46
LSM7-204ENST00000587502 NDUFA13Q9P0J0 144 aa17.92■□□□□ 0.46
LSM7-204ENST00000587502 GNRHRP30968 328 aa17.91■□□□□ 0.46
LSM7-204ENST00000587502 BRWD1-AS2P59051 145 aa17.91■□□□□ 0.46
LSM7-204ENST00000587502 KLF5Q13887 457 aaPredicted RBP17.91■□□□□ 0.46
LSM7-204ENST00000587502 FAM209BQ5JX69 171 aa17.91■□□□□ 0.46
LSM7-204ENST00000587502 TMEM17Q86X19 198 aa17.91■□□□□ 0.46
LSM7-204ENST00000587502 VKORC1L1Q8N0U8 176 aa17.91■□□□□ 0.46
LSM7-204ENST00000587502 OR4A5Q8NH83 315 aa17.91■□□□□ 0.46
LSM7-204ENST00000587502 CD300LFQ8TDQ1 290 aa17.91■□□□□ 0.46
LSM7-204ENST00000587502 GPHA2Q96T91 129 aa17.91■□□□□ 0.46
LSM7-204ENST00000587502 SMAD5-AS1Q9Y6J3 95 aa17.91■□□□□ 0.46
LSM7-204ENST00000587502 TNFSF12O43508 249 aa17.9■□□□□ 0.46
LSM7-204ENST00000587502 RHOGP84095 191 aa17.9■□□□□ 0.46
LSM7-204ENST00000587502 ZNF818PQ6ZRF7 136 aa17.9■□□□□ 0.46
LSM7-204ENST00000587502 SPAG16Q8N0X2 631 aa17.9■□□□□ 0.46
LSM7-204ENST00000587502 SMIM4Q8WVI0 70 aa17.9■□□□□ 0.46
LSM7-204ENST00000587502 ZNF257Q9Y2Q1 563 aa17.9■□□□□ 0.46
LSM7-204ENST00000587502 DNAH9Q9NYC9 4486 aa17.9■□□□□ 0.46
LSM7-204ENST00000587502 TRBV9A0A0B4J1U6 114 aa17.89■□□□□ 0.45
LSM7-204ENST00000587502 FABP12A6NFH5 140 aa17.89■□□□□ 0.45
LSM7-204ENST00000587502 M0QYG6 137 aa17.89■□□□□ 0.45
LSM7-204ENST00000587502 CD3DP04234 171 aa17.89■□□□□ 0.45
LSM7-204ENST00000587502 SPNP16150 400 aa17.89■□□□□ 0.45
LSM7-204ENST00000587502 RPL27AP46776 148 aaKnown RBP17.89■□□□□ 0.45
LSM7-204ENST00000587502 TSPAN5P62079 268 aa17.89■□□□□ 0.45
LSM7-204ENST00000587502 SSBP1Q04837 148 aaKnown RBP17.89■□□□□ 0.45
LSM7-204ENST00000587502 ATP5G2Q06055 141 aa17.89■□□□□ 0.45
LSM7-204ENST00000587502 C11orf87Q6NUJ2 197 aa17.89■□□□□ 0.45
LSM7-204ENST00000587502 TMEM229BQ8NBD8 167 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms