RNA–Protein interactions for RNA: ENST00000587260.1

NFIX-208, Transcript of nuclear factor I X, humanhuman

TSL 1 (best) BASIC

Gene NFIX, Length 1,537 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIX-208ENST00000587260 PUSL1Q8N0Z8 303 aaKnown RBP11.95□□□□□ -0.5
NFIX-208ENST00000587260 DMBX1Q8NFW5 382 aa11.95□□□□□ -0.5
NFIX-208ENST00000587260 OR4D5Q8NGN0 318 aa11.95□□□□□ -0.5
NFIX-208ENST00000587260 OR2T35Q8NGX2 323 aa11.95□□□□□ -0.5
NFIX-208ENST00000587260 RNASE11Q8TAA1 199 aaKnown RBP11.95□□□□□ -0.5
NFIX-208ENST00000587260 HARBI1Q96MB7 349 aa11.95□□□□□ -0.5
NFIX-208ENST00000587260 BET1LQ9NYM9 111 aa11.95□□□□□ -0.5
NFIX-208ENST00000587260 G3V3Q6 166 aa11.94□□□□□ -0.5
NFIX-208ENST00000587260 MOSP00540 346 aa11.94□□□□□ -0.5
NFIX-208ENST00000587260 FGF2P09038 288 aa11.94□□□□□ -0.5
NFIX-208ENST00000587260 MTORP42345 2549 aa11.94□□□□□ -0.5
NFIX-208ENST00000587260 ID3Q02535 119 aa11.94□□□□□ -0.5
NFIX-208ENST00000587260 SCGB2A2Q13296 93 aa11.94□□□□□ -0.5
NFIX-208ENST00000587260 AANATQ16613 207 aa11.94□□□□□ -0.5
NFIX-208ENST00000587260 OR4A47Q6IF82 309 aa11.94□□□□□ -0.5
NFIX-208ENST00000587260 VSTM2AQ8TAG5 236 aa11.94□□□□□ -0.5
NFIX-208ENST00000587260 TMEM140Q9NV12 185 aa11.94□□□□□ -0.5
NFIX-208ENST00000587260 CACNG5Q9UF02 275 aa11.94□□□□□ -0.5
NFIX-208ENST00000587260 HOXA3O43365 443 aaPredicted RBP11.93□□□□□ -0.5
NFIX-208ENST00000587260 CRLF1O75462 422 aa11.93□□□□□ -0.5
NFIX-208ENST00000587260 SPDEFO95238 335 aa11.93□□□□□ -0.5
NFIX-208ENST00000587260 TMEM11P17152 192 aa11.93□□□□□ -0.5
NFIX-208ENST00000587260 UBE2KP61086 200 aa11.93□□□□□ -0.5
NFIX-208ENST00000587260 FGL1Q08830 312 aa11.93□□□□□ -0.5
NFIX-208ENST00000587260 IZUMO4Q1ZYL8 232 aa11.93□□□□□ -0.5
NFIX-208ENST00000587260 Q6YL49 198 aa11.93□□□□□ -0.5
NFIX-208ENST00000587260 TMEM219Q86XT9 240 aa11.93□□□□□ -0.5
NFIX-208ENST00000587260 VKORC1L1Q8N0U8 176 aa11.93□□□□□ -0.5
NFIX-208ENST00000587260 Q8N6K4 173 aa11.93□□□□□ -0.5
NFIX-208ENST00000587260 TEX45Q8NA69 505 aa11.93□□□□□ -0.5
NFIX-208ENST00000587260 OR2T10Q8NGZ9 312 aa11.93□□□□□ -0.5
NFIX-208ENST00000587260 OR4A5Q8NH83 315 aa11.93□□□□□ -0.5
NFIX-208ENST00000587260 PIFOQ8TCI5 191 aa11.93□□□□□ -0.5
NFIX-208ENST00000587260 PPP1R1CQ8WVI7 109 aa11.93□□□□□ -0.5
NFIX-208ENST00000587260 EAF1Q96JC9 268 aaPredicted RBP11.93□□□□□ -0.5
NFIX-208ENST00000587260 RITA1Q96K30 269 aa11.93□□□□□ -0.5
NFIX-208ENST00000587260 DUX5Q96PT3 197 aa11.93□□□□□ -0.5
NFIX-208ENST00000587260 TSNAXQ99598 290 aaKnown RBP11.93□□□□□ -0.5
NFIX-208ENST00000587260 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.93□□□□□ -0.5
NFIX-208ENST00000587260 ZFP57Q9NU63 452 aa11.93□□□□□ -0.5
NFIX-208ENST00000587260 GSKIPQ9P0R6 139 aa11.93□□□□□ -0.5
NFIX-208ENST00000587260 CACFD1Q9UGQ2 172 aa11.93□□□□□ -0.5
NFIX-208ENST00000587260 FN1P02751 2386 aaKnown RBP11.93□□□□□ -0.5
NFIX-208ENST00000587260 CUBNO60494 3623 aa11.93□□□□□ -0.5
NFIX-208ENST00000587260 FAM90A26D6RGX4 464 aa11.92□□□□□ -0.5
NFIX-208ENST00000587260 C1QBP02746 253 aa11.92□□□□□ -0.5
NFIX-208ENST00000587260 CRYGBP07316 175 aa11.92□□□□□ -0.5
NFIX-208ENST00000587260 OR9G9P0C7N8 305 aa11.92□□□□□ -0.5
NFIX-208ENST00000587260 FAM106CPP0CH98 169 aa11.92□□□□□ -0.5
NFIX-208ENST00000587260 SAA1P0DJI8 122 aaPredicted RBP11.92□□□□□ -0.5
NFIX-208ENST00000587260 CNTFRP26992 372 aa11.92□□□□□ -0.5
NFIX-208ENST00000587260 PSMB6P28072 239 aa11.92□□□□□ -0.5
NFIX-208ENST00000587260 IER3P46695 156 aa11.92□□□□□ -0.5
NFIX-208ENST00000587260 RELBQ01201 579 aa11.92□□□□□ -0.5
NFIX-208ENST00000587260 Q5BKY6 102 aa11.92□□□□□ -0.5
NFIX-208ENST00000587260 RBMS3Q6XE24 437 aaKnown RBP11.92□□□□□ -0.5
NFIX-208ENST00000587260 SSX9Q7RTT3 188 aa11.92□□□□□ -0.5
NFIX-208ENST00000587260 ZNF429Q86V71 674 aa11.92□□□□□ -0.5
NFIX-208ENST00000587260 FOXRED2Q8IWF2 684 aa11.92□□□□□ -0.5
NFIX-208ENST00000587260 NPBQ8NG41 125 aa11.92□□□□□ -0.5
NFIX-208ENST00000587260 TMEM167AQ8TBQ9 72 aa11.92□□□□□ -0.5
NFIX-208ENST00000587260 BTBD17A6NE02 478 aa11.91□□□□□ -0.5
NFIX-208ENST00000587260 UPK2O00526 184 aa11.91□□□□□ -0.5
NFIX-208ENST00000587260 KBTBD11O94819 623 aa11.91□□□□□ -0.5
NFIX-208ENST00000587260 MPC2O95563 127 aa11.91□□□□□ -0.5
NFIX-208ENST00000587260 MBPP02686 304 aaPredicted RBP11.91□□□□□ -0.5
NFIX-208ENST00000587260 PSG5Q15238 335 aa11.91□□□□□ -0.5
NFIX-208ENST00000587260 VMA21Q3ZAQ7 101 aa11.91□□□□□ -0.5
NFIX-208ENST00000587260 PDLIM3Q53GG5 364 aaPredicted RBP11.91□□□□□ -0.5
NFIX-208ENST00000587260 OR52E5Q8NH55 327 aa11.91□□□□□ -0.5
NFIX-208ENST00000587260 OR1S1Q8NH92 325 aa11.91□□□□□ -0.5
NFIX-208ENST00000587260 TCF19Q9Y242 345 aa11.91□□□□□ -0.5
NFIX-208ENST00000587260 TRAV14DV4A0A0A6YYC5 116 aa11.91□□□□□ -0.5
NFIX-208ENST00000587260 ST8SIA3O43173 380 aa11.91□□□□□ -0.5
NFIX-208ENST00000587260 NDUFA3O95167 84 aa11.91□□□□□ -0.5
NFIX-208ENST00000587260 FAM157CP0CG43 387 aa11.91□□□□□ -0.5
NFIX-208ENST00000587260 LYL1P12980 280 aa11.91□□□□□ -0.5
NFIX-208ENST00000587260 NKX2-1P43699 371 aaPredicted RBP11.91□□□□□ -0.5
NFIX-208ENST00000587260 RAB32Q13637 225 aa11.91□□□□□ -0.5
NFIX-208ENST00000587260 MMDQ15546 238 aa11.91□□□□□ -0.5
NFIX-208ENST00000587260 TUSC1Q2TAM9 212 aa11.91□□□□□ -0.5
NFIX-208ENST00000587260 CXorf66Q5JRM2 361 aaPredicted RBP11.91□□□□□ -0.5
NFIX-208ENST00000587260 OR8H1Q8NGG4 311 aa11.91□□□□□ -0.5
NFIX-208ENST00000587260 OR4A16Q8NH70 328 aa11.91□□□□□ -0.5
NFIX-208ENST00000587260 SSMEM1Q8WWF3 244 aa11.91□□□□□ -0.5
NFIX-208ENST00000587260 PRDM13Q9H4Q3 707 aa11.91□□□□□ -0.5
NFIX-208ENST00000587260 TMEM14BQ9NUH8 114 aa11.91□□□□□ -0.5
NFIX-208ENST00000587260 HSPB7Q9UBY9 170 aa11.91□□□□□ -0.5
NFIX-208ENST00000587260 FOXA2Q9Y261 457 aaPredicted RBP11.91□□□□□ -0.5
NFIX-208ENST00000587260 POMT1Q9Y6A1 747 aa11.91□□□□□ -0.5
NFIX-208ENST00000587260 TRAV3A0A0B4J244 114 aa11.9□□□□□ -0.5
NFIX-208ENST00000587260 DNAJC9-AS1A6NH13 148 aa11.9□□□□□ -0.5
NFIX-208ENST00000587260 C15orf61A6NNL5 157 aa11.9□□□□□ -0.5
NFIX-208ENST00000587260 SMLR1H3BR10 107 aa11.9□□□□□ -0.5
NFIX-208ENST00000587260 SNAPC5O75971 98 aa11.9□□□□□ -0.5
NFIX-208ENST00000587260 PET100P0DJ07 73 aa11.9□□□□□ -0.5
NFIX-208ENST00000587260 SLC25A4P12235 298 aa11.9□□□□□ -0.5
NFIX-208ENST00000587260 MRGPRG-AS1Q2M3A8 158 aa11.9□□□□□ -0.5
NFIX-208ENST00000587260 HYLS1Q96M11 299 aa11.9□□□□□ -0.5
NFIX-208ENST00000587260 RNF126Q9BV68 326 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms