RNA–Protein interactions for RNA: ENST00000586457.1

CLIP3-203, Transcript of CAP-Gly domain containing linker protein 3, humanhuman

TSL 1 (best)

Gene CLIP3, Length 433 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3-203ENST00000586457 NQO2P16083 231 aa8.46□□□□□ -1.06
CLIP3-203ENST00000586457 NAT1P18440 290 aa8.46□□□□□ -1.06
CLIP3-203ENST00000586457 TAS2R31P59538 309 aa8.46□□□□□ -1.06
CLIP3-203ENST00000586457 DGCR2P98153 550 aa8.46□□□□□ -1.06
CLIP3-203ENST00000586457 RUNX1Q01196 453 aa8.46□□□□□ -1.06
CLIP3-203ENST00000586457 DCTN2Q13561 401 aaKnown RBP8.46□□□□□ -1.06
CLIP3-203ENST00000586457 RNASE10Q5GAN6 216 aaKnown RBP8.46□□□□□ -1.06
CLIP3-203ENST00000586457 ZNF818PQ6ZRF7 136 aa8.46□□□□□ -1.06
CLIP3-203ENST00000586457 LYSMD2Q8IV50 215 aa8.46□□□□□ -1.06
CLIP3-203ENST00000586457 OR4A5Q8NH83 315 aa8.46□□□□□ -1.06
CLIP3-203ENST00000586457 MOB3AQ96BX8 217 aa8.46□□□□□ -1.06
CLIP3-203ENST00000586457 DIRAS2Q96HU8 199 aa8.46□□□□□ -1.06
CLIP3-203ENST00000586457 USMG5Q96IX5 58 aa8.46□□□□□ -1.06
CLIP3-203ENST00000586457 ELOVL1Q9BW60 279 aa8.46□□□□□ -1.06
CLIP3-203ENST00000586457 COMMD5Q9GZQ3 224 aa8.46□□□□□ -1.06
CLIP3-203ENST00000586457 C6orf62Q9GZU0 229 aaPredicted RBP8.46□□□□□ -1.06
CLIP3-203ENST00000586457 RABL2AQ9UBK7 228 aaPredicted RBP8.46□□□□□ -1.06
CLIP3-203ENST00000586457 RABL2BQ9UNT1 228 aa8.46□□□□□ -1.06
CLIP3-203ENST00000586457 NOTCH1P46531 2555 aa8.46□□□□□ -1.06
CLIP3-203ENST00000586457 ANKRD34BA5PLL1 514 aa8.45□□□□□ -1.06
CLIP3-203ENST00000586457 RBFOX2O43251 390 aaKnown RBP eCLIP8.45□□□□□ -1.06
CLIP3-203ENST00000586457 SNAPC5O75971 98 aa8.45□□□□□ -1.06
CLIP3-203ENST00000586457 RLN1P04808 185 aa8.45□□□□□ -1.06
CLIP3-203ENST00000586457 PGAM2P15259 253 aa8.45□□□□□ -1.06
CLIP3-203ENST00000586457 ZP3P21754 424 aa8.45□□□□□ -1.06
CLIP3-203ENST00000586457 GNRHRP30968 328 aa8.45□□□□□ -1.06
CLIP3-203ENST00000586457 RPL27AP46776 148 aaKnown RBP8.45□□□□□ -1.06
CLIP3-203ENST00000586457 INSL3P51460 131 aa8.45□□□□□ -1.06
CLIP3-203ENST00000586457 RPL8P62917 257 aaKnown RBP8.45□□□□□ -1.06
CLIP3-203ENST00000586457 MRPS10P82664 201 aaKnown RBP8.45□□□□□ -1.06
CLIP3-203ENST00000586457 ATP5G2Q06055 141 aa8.45□□□□□ -1.06
CLIP3-203ENST00000586457 IL18Q14116 193 aa8.45□□□□□ -1.06
CLIP3-203ENST00000586457 SPCS2Q15005 226 aa8.45□□□□□ -1.06
CLIP3-203ENST00000586457 PHLDA2Q53GA4 152 aa8.45□□□□□ -1.06
CLIP3-203ENST00000586457 C19orf54Q5BKX5 351 aa8.45□□□□□ -1.06
CLIP3-203ENST00000586457 TMEM167AQ8TBQ9 72 aa8.45□□□□□ -1.06
CLIP3-203ENST00000586457 MYOZ3Q8TDC0 251 aa8.45□□□□□ -1.06
CLIP3-203ENST00000586457 OR4C12Q96R67 309 aa8.45□□□□□ -1.06
CLIP3-203ENST00000586457 TINAGL1Q9GZM7 467 aaPredicted RBP8.45□□□□□ -1.06
CLIP3-203ENST00000586457 ALX4Q9H161 411 aaPredicted RBP8.45□□□□□ -1.06
CLIP3-203ENST00000586457 PLEKHA2Q9HB19 425 aa8.45□□□□□ -1.06
CLIP3-203ENST00000586457 AURKAIP1Q9NWT8 199 aaPredicted RBP8.45□□□□□ -1.06
CLIP3-203ENST00000586457 M0QYG6 137 aa8.44□□□□□ -1.06
CLIP3-203ENST00000586457 SAP30O75446 220 aa8.44□□□□□ -1.06
CLIP3-203ENST00000586457 PGLYRP1O75594 196 aaPredicted RBP8.44□□□□□ -1.06
CLIP3-203ENST00000586457 LY86O95711 162 aa8.44□□□□□ -1.06
CLIP3-203ENST00000586457 HLA-GP17693 338 aa8.44□□□□□ -1.06
CLIP3-203ENST00000586457 TBPP20226 339 aa8.44□□□□□ -1.06
CLIP3-203ENST00000586457 F2RP25116 425 aa8.44□□□□□ -1.06
CLIP3-203ENST00000586457 ECI1P42126 302 aa8.44□□□□□ -1.06
CLIP3-203ENST00000586457 LPAR6P43657 344 aa8.44□□□□□ -1.06
CLIP3-203ENST00000586457 TAS2R19P59542 299 aa8.44□□□□□ -1.06
CLIP3-203ENST00000586457 KIAA0141Q14154 515 aaPredicted RBP8.44□□□□□ -1.06
CLIP3-203ENST00000586457 OR4A47Q6IF82 309 aa8.44□□□□□ -1.06
CLIP3-203ENST00000586457 ZNF429Q86V71 674 aa8.44□□□□□ -1.06
CLIP3-203ENST00000586457 SLC38A6Q8IZM9 456 aa8.44□□□□□ -1.06
CLIP3-203ENST00000586457 OR52I2Q8NH67 350 aa8.44□□□□□ -1.06
CLIP3-203ENST00000586457 DCUN1D4Q92564 292 aa8.44□□□□□ -1.06
CLIP3-203ENST00000586457 DGCR14Q96DF8 476 aaKnown RBP8.44□□□□□ -1.06
CLIP3-203ENST00000586457 PEF1Q9UBV8 284 aaKnown RBP8.44□□□□□ -1.06
CLIP3-203ENST00000586457 KLK11Q9UBX7 282 aa8.44□□□□□ -1.06
CLIP3-203ENST00000586457 ANAPC10Q9UM13 185 aa8.44□□□□□ -1.06
CLIP3-203ENST00000586457 IGHV4OR15-8A0A075B7B6 117 aa8.43□□□□□ -1.06
CLIP3-203ENST00000586457 A0A087WW49 117 aa8.43□□□□□ -1.06
CLIP3-203ENST00000586457 FAM223BA6NKX1 122 aa8.43□□□□□ -1.06
CLIP3-203ENST00000586457 GABARAPH6UMI1 98 aa8.43□□□□□ -1.06
CLIP3-203ENST00000586457 CTDSP2O14595 271 aa8.43□□□□□ -1.06
CLIP3-203ENST00000586457 RBMXL2O75526 392 aaKnown RBP8.43□□□□□ -1.06
CLIP3-203ENST00000586457 KRASP01116 189 aa8.43□□□□□ -1.06
CLIP3-203ENST00000586457 SERPINE2P07093 398 aa8.43□□□□□ -1.06
CLIP3-203ENST00000586457 RPA2P15927 270 aa8.43□□□□□ -1.06
CLIP3-203ENST00000586457 S100A5P33763 92 aa8.43□□□□□ -1.06
CLIP3-203ENST00000586457 SLURP1P55000 103 aa8.43□□□□□ -1.06
CLIP3-203ENST00000586457 RHOGP84095 191 aa8.43□□□□□ -1.06
CLIP3-203ENST00000586457 EIF4EBP1Q13541 118 aaPredicted RBP8.43□□□□□ -1.06
CLIP3-203ENST00000586457 FHL3Q13643 280 aa8.43□□□□□ -1.06
CLIP3-203ENST00000586457 SCGB2B2Q4G0G5 96 aa8.43□□□□□ -1.06
CLIP3-203ENST00000586457 FAM209BQ5JX69 171 aa8.43□□□□□ -1.06
CLIP3-203ENST00000586457 FAM223AQ8IWN6 122 aa8.43□□□□□ -1.06
CLIP3-203ENST00000586457 TTC9CQ8N5M4 171 aa8.43□□□□□ -1.06
CLIP3-203ENST00000586457 MCFD2Q8NI22 146 aa8.43□□□□□ -1.06
CLIP3-203ENST00000586457 ZFAND1Q8TCF1 268 aa8.43□□□□□ -1.06
CLIP3-203ENST00000586457 HINT2Q9BX68 163 aa8.43□□□□□ -1.06
CLIP3-203ENST00000586457 FKBP11Q9NYL4 201 aa8.43□□□□□ -1.06
CLIP3-203ENST00000586457 BET1LQ9NYM9 111 aa8.43□□□□□ -1.06
CLIP3-203ENST00000586457 COMMD9Q9P000 198 aa8.43□□□□□ -1.06
CLIP3-203ENST00000586457 CCDC59Q9P031 241 aaKnown RBP8.43□□□□□ -1.06
CLIP3-203ENST00000586457 MTFP1Q9UDX5 166 aa8.43□□□□□ -1.06
CLIP3-203ENST00000586457 RSL24D1Q9UHA3 163 aaKnown RBP8.43□□□□□ -1.06
CLIP3-203ENST00000586457 ZNF257Q9Y2Q1 563 aa8.43□□□□□ -1.06
CLIP3-203ENST00000586457 FABP12A6NFH5 140 aa8.42□□□□□ -1.06
CLIP3-203ENST00000586457 HMX3A6NHT5 357 aa8.42□□□□□ -1.06
CLIP3-203ENST00000586457 DISC1C4P0D8 188 aa8.42□□□□□ -1.06
CLIP3-203ENST00000586457 ATG12O94817 140 aa8.42□□□□□ -1.06
CLIP3-203ENST00000586457 S1PR2O95136 353 aa8.42□□□□□ -1.06
CLIP3-203ENST00000586457 BRI3O95415 125 aa8.42□□□□□ -1.06
CLIP3-203ENST00000586457 RAB3DO95716 219 aa8.42□□□□□ -1.06
CLIP3-203ENST00000586457 CD3DP04234 171 aa8.42□□□□□ -1.06
CLIP3-203ENST00000586457 HIST1H1BP16401 226 aaKnown RBP8.42□□□□□ -1.06
CLIP3-203ENST00000586457 MECP2P51608 486 aaKnown RBP8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms