RNA–Protein interactions for RNA: ENST00000586193.5

TPM4-203, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 545 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-203ENST00000586193 PDXPQ96GD0 296 aa4.34□□□□□ -1.71
TPM4-203ENST00000586193 OR2A7Q96R45 310 aa4.34□□□□□ -1.71
TPM4-203ENST00000586193 DHRS9Q9BPW9 319 aa4.34□□□□□ -1.71
TPM4-203ENST00000586193 DOHHQ9BU89 302 aa4.34□□□□□ -1.71
TPM4-203ENST00000586193 SLC22A4Q9H015 551 aa4.34□□□□□ -1.71
TPM4-203ENST00000586193 MS4A6AQ9H2W1 248 aa4.34□□□□□ -1.71
TPM4-203ENST00000586193 CA10Q9NS85 328 aa4.34□□□□□ -1.71
TPM4-203ENST00000586193 ACER3Q9NUN7 267 aa4.34□□□□□ -1.71
TPM4-203ENST00000586193 SCN3AQ9NY46 2000 aa4.34□□□□□ -1.71
TPM4-203ENST00000586193 ASCC3Q8N3C0 2202 aaKnown RBP4.34□□□□□ -1.72
TPM4-203ENST00000586193 SPTBN2O15020 2390 aa4.33□□□□□ -1.72
TPM4-203ENST00000586193 DSPPQ9NZW4 1301 aa4.33□□□□□ -1.72
TPM4-203ENST00000586193 TRAV8-3A0A0A6YYJ7 113 aa4.33□□□□□ -1.72
TPM4-203ENST00000586193 C10orf142B7Z368 130 aa4.33□□□□□ -1.72
TPM4-203ENST00000586193 M0R036 132 aa4.33□□□□□ -1.72
TPM4-203ENST00000586193 ZNF861PO60384 105 aa4.33□□□□□ -1.72
TPM4-203ENST00000586193 FOXH1O75593 365 aa4.33□□□□□ -1.72
TPM4-203ENST00000586193 GATBO75879 557 aaKnown RBP4.33□□□□□ -1.72
TPM4-203ENST00000586193 CA2P00918 260 aa4.33□□□□□ -1.72
TPM4-203ENST00000586193 IGLV3-19P01714 112 aa4.33□□□□□ -1.72
TPM4-203ENST00000586193 AP3S2P59780 193 aa4.33□□□□□ -1.72
TPM4-203ENST00000586193 CXCR4P61073 352 aa4.33□□□□□ -1.72
TPM4-203ENST00000586193 NCS1P62166 190 aa4.33□□□□□ -1.72
TPM4-203ENST00000586193 NDPQ00604 133 aa4.33□□□□□ -1.72
TPM4-203ENST00000586193 CLEC12BQ2HXU8 276 aa4.33□□□□□ -1.72
TPM4-203ENST00000586193 ACSM3Q53FZ2 586 aa4.33□□□□□ -1.72
TPM4-203ENST00000586193 TNFAIP8L2Q6P589 184 aaPredicted RBP4.33□□□□□ -1.72
TPM4-203ENST00000586193 NTM-AS1Q6ZSK4 140 aa4.33□□□□□ -1.72
TPM4-203ENST00000586193 HMGN2P46Q86SG4 172 aa4.33□□□□□ -1.72
TPM4-203ENST00000586193 ZNF584Q8IVC4 421 aa4.33□□□□□ -1.72
TPM4-203ENST00000586193 MUC15Q8N387 334 aa4.33□□□□□ -1.72
TPM4-203ENST00000586193 OR5D18Q8NGL1 313 aa4.33□□□□□ -1.72
TPM4-203ENST00000586193 POP5Q969H6 163 aaKnown RBP4.33□□□□□ -1.72
TPM4-203ENST00000586193 RAD51AP1Q96B01 352 aa4.33□□□□□ -1.72
TPM4-203ENST00000586193 PRAP1Q96NZ9 151 aa4.33□□□□□ -1.72
TPM4-203ENST00000586193 TBL1XR1Q9BZK7 514 aa4.33□□□□□ -1.72
TPM4-203ENST00000586193 FBXL12Q9NXK8 326 aa4.33□□□□□ -1.72
TPM4-203ENST00000586193 ZNF222Q9UK12 451 aa4.33□□□□□ -1.72
TPM4-203ENST00000586193 ASB4Q9Y574 426 aa4.33□□□□□ -1.72
TPM4-203ENST00000586193 HSPE1-MOB4S4R3N1 261 aa4.33□□□□□ -1.72
TPM4-203ENST00000586193 NCOR2Q9Y618 2525 aa4.33□□□□□ -1.72
TPM4-203ENST00000586193 TP53BP1Q12888 1972 aaPredicted RBP4.33□□□□□ -1.72
TPM4-203ENST00000586193 FREM2Q5SZK8 3169 aa4.32□□□□□ -1.72
TPM4-203ENST00000586193 HMGN4O00479 90 aa4.32□□□□□ -1.72
TPM4-203ENST00000586193 KRT75O95678 551 aa4.32□□□□□ -1.72
TPM4-203ENST00000586193 CTXN2P0C2S0 81 aa4.32□□□□□ -1.72
TPM4-203ENST00000586193 ZNF688P0C7X2 276 aa4.32□□□□□ -1.72
TPM4-203ENST00000586193 CECR9P0C854 216 aa4.32□□□□□ -1.72
TPM4-203ENST00000586193 OR12D1P0DN82 309 aa4.32□□□□□ -1.72
TPM4-203ENST00000586193 CD99P14209 185 aa4.32□□□□□ -1.72
TPM4-203ENST00000586193 PRTN3P24158 256 aa4.32□□□□□ -1.72
TPM4-203ENST00000586193 EVI2BP34910 448 aa4.32□□□□□ -1.72
TPM4-203ENST00000586193 LSM3P62310 102 aaKnown RBP4.32□□□□□ -1.72
TPM4-203ENST00000586193 CDC20Q12834 499 aa4.32□□□□□ -1.72
TPM4-203ENST00000586193 ZNF79Q15937 498 aa4.32□□□□□ -1.72
TPM4-203ENST00000586193 SSX1Q16384 188 aa4.32□□□□□ -1.72
TPM4-203ENST00000586193 MOGQ16653 247 aa4.32□□□□□ -1.72
TPM4-203ENST00000586193 RNASE13Q5GAN3 156 aaKnown RBP4.32□□□□□ -1.72
TPM4-203ENST00000586193 UBE2NLQ5JXB2 153 aa4.32□□□□□ -1.72
TPM4-203ENST00000586193 C12orf73Q69YU5 71 aa4.32□□□□□ -1.72
TPM4-203ENST00000586193 CD200R1LQ6Q8B3 271 aa4.32□□□□□ -1.72
TPM4-203ENST00000586193 LRRN1Q6UXK5 716 aa4.32□□□□□ -1.72
TPM4-203ENST00000586193 VN1R4Q7Z5H5 301 aa4.32□□□□□ -1.72
TPM4-203ENST00000586193 LINC00596Q86U02 117 aa4.32□□□□□ -1.72
TPM4-203ENST00000586193 TMEM256Q8N2U0 113 aa4.32□□□□□ -1.72
TPM4-203ENST00000586193 OR5D16Q8NGK9 328 aa4.32□□□□□ -1.72
TPM4-203ENST00000586193 OR5M1Q8NGP8 315 aa4.32□□□□□ -1.72
TPM4-203ENST00000586193 CCL4L1Q8NHW4 92 aa4.32□□□□□ -1.72
TPM4-203ENST00000586193 RAB2BQ8WUD1 216 aa4.32□□□□□ -1.72
TPM4-203ENST00000586193 MS4A6EQ96DS6 147 aa4.32□□□□□ -1.72
TPM4-203ENST00000586193 PHYHIPLQ96FC7 376 aa4.32□□□□□ -1.72
TPM4-203ENST00000586193 AIF1LQ9BQI0 150 aa4.32□□□□□ -1.72
TPM4-203ENST00000586193 CCDC90BQ9GZT6 254 aa4.32□□□□□ -1.72
TPM4-203ENST00000586193 OR51I1Q9H343 314 aa4.32□□□□□ -1.72
TPM4-203ENST00000586193 MAP1LC3AQ9H492 121 aa4.32□□□□□ -1.72
TPM4-203ENST00000586193 TRIM45Q9H8W5 580 aaPredicted RBP4.32□□□□□ -1.72
TPM4-203ENST00000586193 NMNAT1Q9HAN9 279 aaPredicted RBP4.32□□□□□ -1.72
TPM4-203ENST00000586193 FAIMQ9NVQ4 179 aa4.32□□□□□ -1.72
TPM4-203ENST00000586193 ANGPT4Q9Y264 503 aa4.32□□□□□ -1.72
TPM4-203ENST00000586193 ZNF780BQ9Y6R6 833 aa4.32□□□□□ -1.72
TPM4-203ENST00000586193 DYSFO75923 2080 aa4.32□□□□□ -1.72
TPM4-203ENST00000586193 PCNX2A6NKB5 2137 aa4.31□□□□□ -1.72
TPM4-203ENST00000586193 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP4.31□□□□□ -1.72
TPM4-203ENST00000586193 TRBV6-6A0A0A6YYG2 114 aa4.31□□□□□ -1.72
TPM4-203ENST00000586193 BPY2O14599 106 aa4.31□□□□□ -1.72
TPM4-203ENST00000586193 MRPS14O60783 128 aaKnown RBP4.31□□□□□ -1.72
TPM4-203ENST00000586193 SULT1C4O75897 302 aa4.31□□□□□ -1.72
TPM4-203ENST00000586193 RPP14O95059 124 aaKnown RBP4.31□□□□□ -1.72
TPM4-203ENST00000586193 CGAP01215 116 aa4.31□□□□□ -1.72
TPM4-203ENST00000586193 IFNA6P05013 189 aa4.31□□□□□ -1.72
TPM4-203ENST00000586193 ISG15P05161 165 aa4.31□□□□□ -1.72
TPM4-203ENST00000586193 GADD45AP24522 165 aa4.31□□□□□ -1.72
TPM4-203ENST00000586193 CBX5P45973 191 aa4.31□□□□□ -1.72
TPM4-203ENST00000586193 IDH2P48735 452 aaKnown RBP4.31□□□□□ -1.72
TPM4-203ENST00000586193 VBP1P61758 197 aa4.31□□□□□ -1.72
TPM4-203ENST00000586193 LOXL1Q08397 574 aaPredicted RBP4.31□□□□□ -1.72
TPM4-203ENST00000586193 SYCNQ0VAF6 134 aa4.31□□□□□ -1.72
TPM4-203ENST00000586193 RSBN1Q5VWQ0 802 aaPredicted RBP4.31□□□□□ -1.72
TPM4-203ENST00000586193 SNX29P2Q8IUI4 249 aa4.31□□□□□ -1.72
TPM4-203ENST00000586193 LINC00612Q8N6U2 182 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 108.4 ms