RNA–Protein interactions for RNA: ENST00000585847.5

VMP1-202, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-202ENST00000585847 LGALS4P56470 323 aa10.2□□□□□ -0.78
VMP1-202ENST00000585847 EIF5AP63241 154 aaKnown RBP10.2□□□□□ -0.78
VMP1-202ENST00000585847 BAXQ07812 192 aa10.2□□□□□ -0.78
VMP1-202ENST00000585847 HABP2Q14520 560 aaPredicted RBP10.2□□□□□ -0.78
VMP1-202ENST00000585847 TPTE2P1Q5T6R2 138 aa10.2□□□□□ -0.78
VMP1-202ENST00000585847 ZNF546Q86UE3 836 aa10.2□□□□□ -0.78
VMP1-202ENST00000585847 BCL6BQ8N143 479 aaPredicted RBP10.2□□□□□ -0.78
VMP1-202ENST00000585847 C9orf62Q8N4C0 152 aa10.2□□□□□ -0.78
VMP1-202ENST00000585847 FLYWCH2Q96CP2 140 aaKnown RBP10.2□□□□□ -0.78
VMP1-202ENST00000585847 WDR89Q96FK6 387 aaPredicted RBP10.2□□□□□ -0.78
VMP1-202ENST00000585847 RHOVQ96L33 236 aa10.2□□□□□ -0.78
VMP1-202ENST00000585847 AQP10Q96PS8 301 aa10.2□□□□□ -0.78
VMP1-202ENST00000585847 CLCC1Q96S66 551 aa10.2□□□□□ -0.78
VMP1-202ENST00000585847 TSNAXQ99598 290 aaKnown RBP10.2□□□□□ -0.78
VMP1-202ENST00000585847 BET1LQ9NYM9 111 aa10.2□□□□□ -0.78
VMP1-202ENST00000585847 ZNRD1Q9P1U0 126 aa10.2□□□□□ -0.78
VMP1-202ENST00000585847 HSPB7Q9UBY9 170 aa10.2□□□□□ -0.78
VMP1-202ENST00000585847 ZNF257Q9Y2Q1 563 aa10.2□□□□□ -0.78
VMP1-202ENST00000585847 TRAV14DV4A0A0A6YYC5 116 aa10.19□□□□□ -0.78
VMP1-202ENST00000585847 IGHV1-69DA0A0B4J2H0 117 aa10.19□□□□□ -0.78
VMP1-202ENST00000585847 LY6LH3BQJ8 138 aa10.19□□□□□ -0.78
VMP1-202ENST00000585847 L7N2F9 121 aa10.19□□□□□ -0.78
VMP1-202ENST00000585847 RAMP3O60896 148 aa10.19□□□□□ -0.78
VMP1-202ENST00000585847 TSPAN9O75954 239 aa10.19□□□□□ -0.78
VMP1-202ENST00000585847 IGKV1-39P01597 117 aa10.19□□□□□ -0.78
VMP1-202ENST00000585847 IGHV1-69P01742 117 aa10.19□□□□□ -0.78
VMP1-202ENST00000585847 IGKV1D-39P04432 117 aa10.19□□□□□ -0.78
VMP1-202ENST00000585847 ARG1P05089 322 aa10.19□□□□□ -0.78
VMP1-202ENST00000585847 COX7A1P24310 79 aa10.19□□□□□ -0.78
VMP1-202ENST00000585847 CD1BP29016 333 aa10.19□□□□□ -0.78
VMP1-202ENST00000585847 S100A10P60903 97 aa10.19□□□□□ -0.78
VMP1-202ENST00000585847 RPP30P78346 268 aaKnown RBP10.19□□□□□ -0.78
VMP1-202ENST00000585847 RAB32Q13637 225 aa10.19□□□□□ -0.78
VMP1-202ENST00000585847 VMA21Q3ZAQ7 101 aa10.19□□□□□ -0.78
VMP1-202ENST00000585847 BRD3OSQ6XYD6 125 aa10.19□□□□□ -0.78
VMP1-202ENST00000585847 DRAXINQ8NBI3 349 aaPredicted RBP10.19□□□□□ -0.78
VMP1-202ENST00000585847 DMBX1Q8NFW5 382 aa10.19□□□□□ -0.78
VMP1-202ENST00000585847 OR8H1Q8NGG4 311 aa10.19□□□□□ -0.78
VMP1-202ENST00000585847 OR5B3Q8NH48 314 aa10.19□□□□□ -0.78
VMP1-202ENST00000585847 NANPQ8TBE9 248 aa10.19□□□□□ -0.78
VMP1-202ENST00000585847 C17orf50Q8WW18 174 aa10.19□□□□□ -0.78
VMP1-202ENST00000585847 GPR146Q96CH1 333 aa10.19□□□□□ -0.78
VMP1-202ENST00000585847 MALSU1Q96EH3 234 aa10.19□□□□□ -0.78
VMP1-202ENST00000585847 MRPL20Q9BYC9 149 aaKnown RBP10.19□□□□□ -0.78
VMP1-202ENST00000585847 MFFQ9GZY8 342 aa10.19□□□□□ -0.78
VMP1-202ENST00000585847 SLC25A31Q9H0C2 315 aa10.19□□□□□ -0.78
VMP1-202ENST00000585847 PRR13Q9NZ81 148 aa10.19□□□□□ -0.78
VMP1-202ENST00000585847 MBD2Q9UBB5 411 aa10.19□□□□□ -0.78
VMP1-202ENST00000585847 CACNG5Q9UF02 275 aa10.19□□□□□ -0.78
VMP1-202ENST00000585847 CDC42EP3Q9UKI2 254 aa10.19□□□□□ -0.78
VMP1-202ENST00000585847 NUP50Q9UKX7 468 aa10.19□□□□□ -0.78
VMP1-202ENST00000585847 HSPB11Q9Y547 144 aa10.19□□□□□ -0.78
VMP1-202ENST00000585847 A0A1W2PRD5 423 aa10.18□□□□□ -0.78
VMP1-202ENST00000585847 A0A1W2PRF3 423 aa10.18□□□□□ -0.78
VMP1-202ENST00000585847 A0A1W2PRM7 423 aa10.18□□□□□ -0.78
VMP1-202ENST00000585847 K7EPK0 472 aa10.18□□□□□ -0.78
VMP1-202ENST00000585847 ARPC5O15511 151 aa10.18□□□□□ -0.78
VMP1-202ENST00000585847 TSC22D2O75157 780 aa10.18□□□□□ -0.78
VMP1-202ENST00000585847 CRYZL1O95825 349 aa10.18□□□□□ -0.78
VMP1-202ENST00000585847 KRASP01116 189 aa10.18□□□□□ -0.78
VMP1-202ENST00000585847 IGHV3-7P01780 117 aa10.18□□□□□ -0.78
VMP1-202ENST00000585847 MBPP02686 304 aaPredicted RBP10.18□□□□□ -0.78
VMP1-202ENST00000585847 FAM157CP0CG43 387 aa10.18□□□□□ -0.78
VMP1-202ENST00000585847 S100A11P31949 105 aa10.18□□□□□ -0.78
VMP1-202ENST00000585847 BRS3P32247 399 aa10.18□□□□□ -0.78
VMP1-202ENST00000585847 BRWD1-AS2P59051 145 aa10.18□□□□□ -0.78
VMP1-202ENST00000585847 UBE2KP61086 200 aa10.18□□□□□ -0.78
VMP1-202ENST00000585847 RPL23AP62750 156 aaKnown RBP10.18□□□□□ -0.78
VMP1-202ENST00000585847 VAMP2P63027 116 aa10.18□□□□□ -0.78
VMP1-202ENST00000585847 C9orf139Q6ZV77 190 aa10.18□□□□□ -0.78
VMP1-202ENST00000585847 KCNRGQ8N5I3 272 aa10.18□□□□□ -0.78
VMP1-202ENST00000585847 OR4A16Q8NH70 328 aa10.18□□□□□ -0.78
VMP1-202ENST00000585847 DCUN1D4Q92564 292 aa10.18□□□□□ -0.78
VMP1-202ENST00000585847 HARBI1Q96MB7 349 aa10.18□□□□□ -0.78
VMP1-202ENST00000585847 ZNF48Q96MX3 618 aaPredicted RBP10.18□□□□□ -0.78
VMP1-202ENST00000585847 MS4A7Q9GZW8 240 aaPredicted RBP10.18□□□□□ -0.78
VMP1-202ENST00000585847 SLA2Q9H6Q3 261 aa10.18□□□□□ -0.78
VMP1-202ENST00000585847 FOXA2Q9Y261 457 aaPredicted RBP10.18□□□□□ -0.78
VMP1-202ENST00000585847 IGHV1-3A0A0C4DH29 117 aa10.17□□□□□ -0.78
VMP1-202ENST00000585847 A0A1W2PPE3 182 aa10.17□□□□□ -0.78
VMP1-202ENST00000585847 KANTRA0A1W2PQU2 76 aa10.17□□□□□ -0.78
VMP1-202ENST00000585847 C15orf61A6NNL5 157 aa10.17□□□□□ -0.78
VMP1-202ENST00000585847 MPTX1A8MV57 137 aa10.17□□□□□ -0.78
VMP1-202ENST00000585847 H7C2Y5 167 aa10.17□□□□□ -0.78
VMP1-202ENST00000585847 NPFFO15130 113 aa10.17□□□□□ -0.78
VMP1-202ENST00000585847 SHOXO15266 292 aa10.17□□□□□ -0.78
VMP1-202ENST00000585847 SYNGR2O43760 224 aa10.17□□□□□ -0.78
VMP1-202ENST00000585847 MAS1LP35410 378 aa10.17□□□□□ -0.78
VMP1-202ENST00000585847 DYNLT3P51808 116 aa10.17□□□□□ -0.78
VMP1-202ENST00000585847 SPCS3P61009 180 aa10.17□□□□□ -0.78
VMP1-202ENST00000585847 TNFRSF9Q07011 255 aa10.17□□□□□ -0.78
VMP1-202ENST00000585847 AANATQ16613 207 aa10.17□□□□□ -0.78
VMP1-202ENST00000585847 LRRC37A5PQ49AS3 106 aa10.17□□□□□ -0.78
VMP1-202ENST00000585847 HSD17B13Q7Z5P4 300 aaPredicted RBP10.17□□□□□ -0.78
VMP1-202ENST00000585847 LHFPL4Q7Z7J7 247 aa10.17□□□□□ -0.78
VMP1-202ENST00000585847 SLC51BQ86UW2 128 aa10.17□□□□□ -0.78
VMP1-202ENST00000585847 STX12Q86Y82 276 aa10.17□□□□□ -0.78
VMP1-202ENST00000585847 PUSL1Q8N0Z8 303 aaKnown RBP10.17□□□□□ -0.78
VMP1-202ENST00000585847 DYNAPQ8N1N2 210 aa10.17□□□□□ -0.78
VMP1-202ENST00000585847 TEX45Q8NA69 505 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms