RNA–Protein interactions for RNA: ENST00000585428.1

SDF2-202, Transcript of stromal cell derived factor 2, humanhuman

TSL 1 (best)

Gene SDF2, Length 924 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-202ENST00000585428 OR2W1Q9Y3N9 320 aa10.82□□□□□ -0.68
SDF2-202ENST00000585428 A0A075B6Q4 140 aa10.81□□□□□ -0.68
SDF2-202ENST00000585428 TMEM213A2RRL7 107 aa10.81□□□□□ -0.68
SDF2-202ENST00000585428 J3QRK9 145 aa10.81□□□□□ -0.68
SDF2-202ENST00000585428 SLC22A5O76082 557 aa10.81□□□□□ -0.68
SDF2-202ENST00000585428 C8orf88P0DMB2 117 aa10.81□□□□□ -0.68
SDF2-202ENST00000585428 DTYMKP23919 212 aa10.81□□□□□ -0.68
SDF2-202ENST00000585428 MAS1LP35410 378 aa10.81□□□□□ -0.68
SDF2-202ENST00000585428 TALDO1P37837 337 aa10.81□□□□□ -0.68
SDF2-202ENST00000585428 OR10A3P58181 314 aa10.81□□□□□ -0.68
SDF2-202ENST00000585428 ARFRP1Q13795 201 aa10.81□□□□□ -0.68
SDF2-202ENST00000585428 FAM106AQ4KMX7 169 aa10.81□□□□□ -0.68
SDF2-202ENST00000585428 ZNF57Q68EA5 555 aaPredicted RBP10.81□□□□□ -0.68
SDF2-202ENST00000585428 CLEC19AQ6UXS0 136 aa10.81□□□□□ -0.68
SDF2-202ENST00000585428 WFDC3Q8IUB2 231 aa10.81□□□□□ -0.68
SDF2-202ENST00000585428 UXS1Q8NBZ7 420 aa10.81□□□□□ -0.68
SDF2-202ENST00000585428 TMEM167AQ8TBQ9 72 aa10.81□□□□□ -0.68
SDF2-202ENST00000585428 CACNG8Q8WXS5 425 aa10.81□□□□□ -0.68
SDF2-202ENST00000585428 OR2A7Q96R45 310 aa10.81□□□□□ -0.68
SDF2-202ENST00000585428 RBMX2Q9Y388 322 aaKnown RBP10.81□□□□□ -0.68
SDF2-202ENST00000585428 SELENOKQ9Y6D0 94 aa10.81□□□□□ -0.68
SDF2-202ENST00000585428 LOC102724200A0A096LPH7 203 aaPredicted RBP10.8□□□□□ -0.68
SDF2-202ENST00000585428 METTL21EPA6NDL7 271 aa10.8□□□□□ -0.68
SDF2-202ENST00000585428 A8MWP6 167 aa10.8□□□□□ -0.68
SDF2-202ENST00000585428 PDCD5O14737 125 aa10.8□□□□□ -0.68
SDF2-202ENST00000585428 RGS10O43665 173 aa10.8□□□□□ -0.68
SDF2-202ENST00000585428 KBTBD11O94819 623 aa10.8□□□□□ -0.68
SDF2-202ENST00000585428 IGHV3-23P01764 117 aa10.8□□□□□ -0.68
SDF2-202ENST00000585428 CTXN2P0C2S0 81 aa10.8□□□□□ -0.68
SDF2-202ENST00000585428 PSMB6P28072 239 aa10.8□□□□□ -0.68
SDF2-202ENST00000585428 ARL3P36405 182 aa10.8□□□□□ -0.68
SDF2-202ENST00000585428 SSX1Q16384 188 aa10.8□□□□□ -0.68
SDF2-202ENST00000585428 CDNFQ49AH0 187 aa10.8□□□□□ -0.68
SDF2-202ENST00000585428 VSTM2AQ8TAG5 236 aa10.8□□□□□ -0.68
SDF2-202ENST00000585428 FYTTD1Q96QD9 318 aaKnown RBP10.8□□□□□ -0.68
SDF2-202ENST00000585428 ST6GALNAC5Q9BVH7 336 aa10.8□□□□□ -0.68
SDF2-202ENST00000585428 GGTLC1Q9BX51 225 aa10.8□□□□□ -0.68
SDF2-202ENST00000585428 IGKV1D-13A0A0B4J2D9 117 aa10.79□□□□□ -0.68
SDF2-202ENST00000585428 ZNF320A2RRD8 509 aa10.79□□□□□ -0.68
SDF2-202ENST00000585428 CLEC3BP05452 202 aa10.79□□□□□ -0.68
SDF2-202ENST00000585428 IGKV1-13P0DP09 117 aa10.79□□□□□ -0.68
SDF2-202ENST00000585428 AREGP15514 252 aa10.79□□□□□ -0.68
SDF2-202ENST00000585428 CTRB1P17538 263 aa10.79□□□□□ -0.68
SDF2-202ENST00000585428 NFYAP23511 347 aaPredicted RBP10.79□□□□□ -0.68
SDF2-202ENST00000585428 RPL27AP46776 148 aaKnown RBP10.79□□□□□ -0.68
SDF2-202ENST00000585428 ANKRD55Q3KP44 614 aa10.79□□□□□ -0.68
SDF2-202ENST00000585428 CTRB2Q6GPI1 263 aa10.79□□□□□ -0.68
SDF2-202ENST00000585428 KCTD9Q7L273 389 aa10.79□□□□□ -0.68
SDF2-202ENST00000585428 PRSS48Q7RTY5 328 aa10.79□□□□□ -0.68
SDF2-202ENST00000585428 NR2C2APQ86WQ0 139 aa10.79□□□□□ -0.68
SDF2-202ENST00000585428 MFSD4AQ8N468 514 aa10.79□□□□□ -0.68
SDF2-202ENST00000585428 OR52B4Q8NGK2 314 aa10.79□□□□□ -0.68
SDF2-202ENST00000585428 DCSTAMPQ9H295 470 aa10.79□□□□□ -0.68
SDF2-202ENST00000585428 VCXQ9H320 206 aa10.79□□□□□ -0.68
SDF2-202ENST00000585428 S4R3C0 116 aa10.79□□□□□ -0.68
SDF2-202ENST00000585428 TRBV7-1A0A0A6YYK4 115 aa10.78□□□□□ -0.68
SDF2-202ENST00000585428 TRAV25A0A0B4J276 109 aa10.78□□□□□ -0.68
SDF2-202ENST00000585428 CGB1A6NKQ9 187 aa10.78□□□□□ -0.68
SDF2-202ENST00000585428 SCAF4O95104 1147 aaKnown RBP10.78□□□□□ -0.68
SDF2-202ENST00000585428 LY6G6CO95867 125 aa10.78□□□□□ -0.68
SDF2-202ENST00000585428 CD36P16671 472 aa10.78□□□□□ -0.68
SDF2-202ENST00000585428 CRHBPP24387 322 aa10.78□□□□□ -0.68
SDF2-202ENST00000585428 MAP2K4P45985 399 aa10.78□□□□□ -0.68
SDF2-202ENST00000585428 EWSR1Q01844 656 aaKnown RBP eCLIP10.78□□□□□ -0.68
SDF2-202ENST00000585428 TNFRSF9Q07011 255 aa10.78□□□□□ -0.68
SDF2-202ENST00000585428 ARL6IP1Q15041 203 aa10.78□□□□□ -0.68
SDF2-202ENST00000585428 TM4SF20Q53R12 229 aa10.78□□□□□ -0.68
SDF2-202ENST00000585428 OR2B11Q5JQS5 317 aa10.78□□□□□ -0.68
SDF2-202ENST00000585428 HACD4Q5VWC8 232 aa10.78□□□□□ -0.68
SDF2-202ENST00000585428 OR4S2Q8NH73 311 aa10.78□□□□□ -0.68
SDF2-202ENST00000585428 EEF1AKMT3Q96AZ1 226 aa10.78□□□□□ -0.68
SDF2-202ENST00000585428 HSD17B10Q99714 261 aaKnown RBP10.78□□□□□ -0.68
SDF2-202ENST00000585428 ATG5Q9H1Y0 275 aa10.78□□□□□ -0.68
SDF2-202ENST00000585428 MRPS7Q9Y2R9 242 aaKnown RBP10.78□□□□□ -0.68
SDF2-202ENST00000585428 IGLV11-55A0A075B6I3 123 aa10.77□□□□□ -0.69
SDF2-202ENST00000585428 DPPA5A6NC42 116 aa10.77□□□□□ -0.69
SDF2-202ENST00000585428 DHFRP00374 187 aa10.77□□□□□ -0.69
SDF2-202ENST00000585428 HIST1H1BP16401 226 aaKnown RBP10.77□□□□□ -0.69
SDF2-202ENST00000585428 RAB3BP20337 219 aa10.77□□□□□ -0.69
SDF2-202ENST00000585428 OR4A47Q6IF82 309 aa10.77□□□□□ -0.69
SDF2-202ENST00000585428 CNIH2Q6PI25 160 aa10.77□□□□□ -0.69
SDF2-202ENST00000585428 CEMP1Q6PRD7 247 aaPredicted RBP10.77□□□□□ -0.69
SDF2-202ENST00000585428 UNQ9165/PRO28630Q6UXU0 137 aa10.77□□□□□ -0.69
SDF2-202ENST00000585428 Q6ZWC4 215 aa10.77□□□□□ -0.69
SDF2-202ENST00000585428 CCDC90BQ9GZT6 254 aa10.77□□□□□ -0.69
SDF2-202ENST00000585428 MRPL27Q9P0M9 148 aaKnown RBP10.77□□□□□ -0.69
SDF2-202ENST00000585428 SPATA2Q9UM82 520 aa10.77□□□□□ -0.69
SDF2-202ENST00000585428 TP53TG1Q9Y2A0 90 aa10.77□□□□□ -0.69
SDF2-202ENST00000585428 A0A0J9YWU9 116 aa10.76□□□□□ -0.69
SDF2-202ENST00000585428 TRDV1A0A1B0GX56 115 aa10.76□□□□□ -0.69
SDF2-202ENST00000585428 HRASP01112 189 aa10.76□□□□□ -0.69
SDF2-202ENST00000585428 MYOD1P15172 320 aa10.76□□□□□ -0.69
SDF2-202ENST00000585428 GALP22466 123 aa10.76□□□□□ -0.69
SDF2-202ENST00000585428 BTNL8Q6UX41 500 aa10.76□□□□□ -0.69
SDF2-202ENST00000585428 ZNF66Q6ZN08 573 aa10.76□□□□□ -0.69
SDF2-202ENST00000585428 TCTEX1D2Q8WW35 142 aa10.76□□□□□ -0.69
SDF2-202ENST00000585428 NRG4Q8WWG1 115 aa10.76□□□□□ -0.69
SDF2-202ENST00000585428 MARC2Q969Z3 335 aa10.76□□□□□ -0.69
SDF2-202ENST00000585428 CXorf58Q96LI9 332 aa10.76□□□□□ -0.69
SDF2-202ENST00000585428 ALMS1Q8TCU4 4167 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms