RNA–Protein interactions for RNA: ENST00000585370.1

LIG3-203, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 235 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-203ENST00000585370 BARX1Q9HBU1 254 aaPredicted RBP8.47□□□□□ -1.05
LIG3-203ENST00000585370 SLC35D1Q9NTN3 355 aa8.47□□□□□ -1.05
LIG3-203ENST00000585370 FKBP11Q9NYL4 201 aa8.47□□□□□ -1.05
LIG3-203ENST00000585370 IGSF23A1L1A6 192 aa8.46□□□□□ -1.06
LIG3-203ENST00000585370 NUDT19A8MXV4 375 aa8.46□□□□□ -1.06
LIG3-203ENST00000585370 RBMXL2O75526 392 aaKnown RBP8.46□□□□□ -1.06
LIG3-203ENST00000585370 CRYZL1O95825 349 aa8.46□□□□□ -1.06
LIG3-203ENST00000585370 NMBP08949 121 aa8.46□□□□□ -1.06
LIG3-203ENST00000585370 SEC11BP0C7V7 166 aa8.46□□□□□ -1.06
LIG3-203ENST00000585370 CDKN1AP38936 164 aa8.46□□□□□ -1.06
LIG3-203ENST00000585370 RAB5CP51148 216 aa8.46□□□□□ -1.06
LIG3-203ENST00000585370 RAB13P51153 203 aa8.46□□□□□ -1.06
LIG3-203ENST00000585370 NHLH2Q02577 135 aa8.46□□□□□ -1.06
LIG3-203ENST00000585370 KRTAP1-1Q07627 177 aa8.46□□□□□ -1.06
LIG3-203ENST00000585370 ATP6V1FQ16864 119 aa8.46□□□□□ -1.06
LIG3-203ENST00000585370 RPL7L1Q6DKI1 246 aaKnown RBP8.46□□□□□ -1.06
LIG3-203ENST00000585370 PDPNQ86YL7 162 aa8.46□□□□□ -1.06
LIG3-203ENST00000585370 STPG2Q8N412 459 aa8.46□□□□□ -1.06
LIG3-203ENST00000585370 OR5AN1Q8NGI8 311 aa8.46□□□□□ -1.06
LIG3-203ENST00000585370 OR4A5Q8NH83 315 aa8.46□□□□□ -1.06
LIG3-203ENST00000585370 LHX4Q969G2 390 aa8.46□□□□□ -1.06
LIG3-203ENST00000585370 ST6GALNAC6Q969X2 333 aa8.46□□□□□ -1.06
LIG3-203ENST00000585370 SAT2Q96F10 170 aaPredicted RBP8.46□□□□□ -1.06
LIG3-203ENST00000585370 RHOVQ96L33 236 aa8.46□□□□□ -1.06
LIG3-203ENST00000585370 FAM210AQ96ND0 272 aa8.46□□□□□ -1.06
LIG3-203ENST00000585370 GINS3Q9BRX5 216 aa8.46□□□□□ -1.06
LIG3-203ENST00000585370 RBKSQ9H477 322 aa8.46□□□□□ -1.06
LIG3-203ENST00000585370 PFDN2Q9UHV9 154 aa8.46□□□□□ -1.06
LIG3-203ENST00000585370 PRNDQ9UKY0 176 aa8.46□□□□□ -1.06
LIG3-203ENST00000585370 IGHV2-26A0A0B4J1V2 119 aa8.45□□□□□ -1.06
LIG3-203ENST00000585370 CEBPZOSA8MTT3 80 aa8.45□□□□□ -1.06
LIG3-203ENST00000585370 NDUFS8O00217 210 aa8.45□□□□□ -1.06
LIG3-203ENST00000585370 FGF16O43320 207 aa8.45□□□□□ -1.06
LIG3-203ENST00000585370 TMEM50AO95807 157 aa8.45□□□□□ -1.06
LIG3-203ENST00000585370 IFNA5P01569 189 aa8.45□□□□□ -1.06
LIG3-203ENST00000585370 IGLV1-47P01700 117 aa8.45□□□□□ -1.06
LIG3-203ENST00000585370 IL6RP08887 468 aaPredicted RBP8.45□□□□□ -1.06
LIG3-203ENST00000585370 FGF2P09038 288 aa8.45□□□□□ -1.06
LIG3-203ENST00000585370 ATP5IP56385 69 aaPredicted RBP8.45□□□□□ -1.06
LIG3-203ENST00000585370 LINC00205P59089 165 aa8.45□□□□□ -1.06
LIG3-203ENST00000585370 BLOC1S1P78537 153 aa8.45□□□□□ -1.06
LIG3-203ENST00000585370 IZUMO4Q1ZYL8 232 aa8.45□□□□□ -1.06
LIG3-203ENST00000585370 TMEM177Q53S58 311 aa8.45□□□□□ -1.06
LIG3-203ENST00000585370 UTF1Q5T230 341 aa8.45□□□□□ -1.06
LIG3-203ENST00000585370 C1orf229Q6ZS94 237 aaPredicted RBP8.45□□□□□ -1.06
LIG3-203ENST00000585370 TGIF2LXQ8IUE1 241 aa8.45□□□□□ -1.06
LIG3-203ENST00000585370 PUSL1Q8N0Z8 303 aaKnown RBP8.45□□□□□ -1.06
LIG3-203ENST00000585370 MAPK1IP1LQ8NDC0 245 aa8.45□□□□□ -1.06
LIG3-203ENST00000585370 OR4C13Q8NGP0 309 aa8.45□□□□□ -1.06
LIG3-203ENST00000585370 VSTM2AQ8TAG5 236 aa8.45□□□□□ -1.06
LIG3-203ENST00000585370 DTD1Q8TEA8 209 aa8.45□□□□□ -1.06
LIG3-203ENST00000585370 FLYWCH2Q96CP2 140 aaKnown RBP8.45□□□□□ -1.06
LIG3-203ENST00000585370 GNPNAT1Q96EK6 184 aaPredicted RBP8.45□□□□□ -1.06
LIG3-203ENST00000585370 TSNAXQ99598 290 aaKnown RBP8.45□□□□□ -1.06
LIG3-203ENST00000585370 NABP2Q9BQ15 211 aa8.45□□□□□ -1.06
LIG3-203ENST00000585370 PARD6GQ9BYG4 376 aaPredicted RBP8.45□□□□□ -1.06
LIG3-203ENST00000585370 SMIM3Q9BZL3 60 aa8.45□□□□□ -1.06
LIG3-203ENST00000585370 HIPK2Q9H2X6 1198 aa8.45□□□□□ -1.06
LIG3-203ENST00000585370 TMEM140Q9NV12 185 aa8.45□□□□□ -1.06
LIG3-203ENST00000585370 BET1LQ9NYM9 111 aa8.45□□□□□ -1.06
LIG3-203ENST00000585370 STRAPQ9Y3F4 350 aaKnown RBP8.45□□□□□ -1.06
LIG3-203ENST00000585370 A8MXK9 166 aa8.44□□□□□ -1.06
LIG3-203ENST00000585370 RNF223E7ERA6 249 aa8.44□□□□□ -1.06
LIG3-203ENST00000585370 H0YJW9 148 aa8.44□□□□□ -1.06
LIG3-203ENST00000585370 ENSAO43768 121 aaKnown RBP8.44□□□□□ -1.06
LIG3-203ENST00000585370 CRLF1O75462 422 aa8.44□□□□□ -1.06
LIG3-203ENST00000585370 LY6HO94772 140 aa8.44□□□□□ -1.06
LIG3-203ENST00000585370 IFNA17P01571 189 aa8.44□□□□□ -1.06
LIG3-203ENST00000585370 IGHV2-5P01817 119 aa8.44□□□□□ -1.06
LIG3-203ENST00000585370 OR9G9P0C7N8 305 aa8.44□□□□□ -1.06
LIG3-203ENST00000585370 PRTN3P24158 256 aa8.44□□□□□ -1.06
LIG3-203ENST00000585370 LGALS7P47929 136 aa8.44□□□□□ -1.06
LIG3-203ENST00000585370 SULT1A2P50226 295 aa8.44□□□□□ -1.06
LIG3-203ENST00000585370 DSCR9P59020 149 aa8.44□□□□□ -1.06
LIG3-203ENST00000585370 HSPE1P61604 102 aaKnown RBP8.44□□□□□ -1.06
LIG3-203ENST00000585370 RELBQ01201 579 aa8.44□□□□□ -1.06
LIG3-203ENST00000585370 CLEC12BQ2HXU8 276 aa8.44□□□□□ -1.06
LIG3-203ENST00000585370 HLA-DRB5Q30154 266 aa8.44□□□□□ -1.06
LIG3-203ENST00000585370 TMEM14EPQ6UXP3 125 aa8.44□□□□□ -1.06
LIG3-203ENST00000585370 OR11H6Q8NGC7 330 aa8.44□□□□□ -1.06
LIG3-203ENST00000585370 OR5C1Q8NGR4 320 aa8.44□□□□□ -1.06
LIG3-203ENST00000585370 PINX1Q96BK5 328 aaKnown RBP8.44□□□□□ -1.06
LIG3-203ENST00000585370 ATP5SQ99766 215 aa8.44□□□□□ -1.06
LIG3-203ENST00000585370 RNF5Q99942 180 aa8.44□□□□□ -1.06
LIG3-203ENST00000585370 MRPL20Q9BYC9 149 aaKnown RBP8.44□□□□□ -1.06
LIG3-203ENST00000585370 UNKLQ9H9P5 680 aaKnown RBP8.44□□□□□ -1.06
LIG3-203ENST00000585370 WFDC1Q9HC57 220 aa8.44□□□□□ -1.06
LIG3-203ENST00000585370 NUP50Q9UKX7 468 aa8.44□□□□□ -1.06
LIG3-203ENST00000585370 FOXA2Q9Y261 457 aaPredicted RBP8.44□□□□□ -1.06
LIG3-203ENST00000585370 ZNF257Q9Y2Q1 563 aa8.44□□□□□ -1.06
LIG3-203ENST00000585370 WASHC3Q9Y3C0 194 aa8.44□□□□□ -1.06
LIG3-203ENST00000585370 KPTNQ9Y664 436 aa8.44□□□□□ -1.06
LIG3-203ENST00000585370 YLPM1P49750 1951 aaKnown RBP8.44□□□□□ -1.06
LIG3-203ENST00000585370 LEUTXA8MZ59 168 aa8.43□□□□□ -1.06
LIG3-203ENST00000585370 C22orf46C9J442 243 aa8.43□□□□□ -1.06
LIG3-203ENST00000585370 UMAD1C9J7I0 102 aa8.43□□□□□ -1.06
LIG3-203ENST00000585370 BUB1B-PAK6H3BSN5 160 aa8.43□□□□□ -1.06
LIG3-203ENST00000585370 H7C2Y5 167 aa8.43□□□□□ -1.06
LIG3-203ENST00000585370 TRIM77I1YAP6 450 aa8.43□□□□□ -1.06
LIG3-203ENST00000585370 UPK2O00526 184 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms