RNA–Protein interactions for RNA: ENST00000585031.2

TOP3A-220, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 4

Gene TOP3A, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-220ENST00000585031 CA11O75493 328 aa13.63□□□□□ -0.23
TOP3A-220ENST00000585031 TCRBP04435 133 aa13.63□□□□□ -0.23
TOP3A-220ENST00000585031 SAA2P0DJI9 122 aaPredicted RBP13.63□□□□□ -0.23
TOP3A-220ENST00000585031 BTCP35070 178 aa13.63□□□□□ -0.23
TOP3A-220ENST00000585031 TMEM267Q0VDI3 215 aaPredicted RBP13.63□□□□□ -0.23
TOP3A-220ENST00000585031 LCN12Q6JVE5 192 aa13.63□□□□□ -0.23
TOP3A-220ENST00000585031 CHAC2Q8WUX2 184 aa13.63□□□□□ -0.23
TOP3A-220ENST00000585031 SLA2Q9H6Q3 261 aa13.63□□□□□ -0.23
TOP3A-220ENST00000585031 OR2S2Q9NQN1 319 aa13.63□□□□□ -0.23
TOP3A-220ENST00000585031 MCUBQ9NWR8 336 aa13.63□□□□□ -0.23
TOP3A-220ENST00000585031 ETAA1Q9NY74 926 aa13.63□□□□□ -0.23
TOP3A-220ENST00000585031 MFNGO00587 321 aa13.62□□□□□ -0.23
TOP3A-220ENST00000585031 GNB3P16520 340 aa13.62□□□□□ -0.23
TOP3A-220ENST00000585031 TBPP20226 339 aa13.62□□□□□ -0.23
TOP3A-220ENST00000585031 ARFRP1Q13795 201 aa13.62□□□□□ -0.23
TOP3A-220ENST00000585031 MEF2DQ14814 521 aa13.62□□□□□ -0.23
TOP3A-220ENST00000585031 STEAP1BQ6NZ63 245 aa13.62□□□□□ -0.23
TOP3A-220ENST00000585031 GLDNQ6ZMI3 551 aaPredicted RBP13.62□□□□□ -0.23
TOP3A-220ENST00000585031 OVOL2Q9BRP0 275 aa13.62□□□□□ -0.23
TOP3A-220ENST00000585031 TAF9BQ9HBM6 251 aa13.62□□□□□ -0.23
TOP3A-220ENST00000585031 SIGLEC8Q9NYZ4 499 aa13.62□□□□□ -0.23
TOP3A-220ENST00000585031 RCC2Q9P258 522 aaKnown RBP13.62□□□□□ -0.23
TOP3A-220ENST00000585031 MUC4Q99102 2169 aa13.62□□□□□ -0.23
TOP3A-220ENST00000585031 MEIS3P1A6NDR6 274 aa13.61□□□□□ -0.23
TOP3A-220ENST00000585031 FAM90A7PA6NKC0 464 aa13.61□□□□□ -0.23
TOP3A-220ENST00000585031 FAM90A23PA8MXZ1 464 aa13.61□□□□□ -0.23
TOP3A-220ENST00000585031 RBMXL2O75526 392 aaKnown RBP13.61□□□□□ -0.23
TOP3A-220ENST00000585031 RAB3DO95716 219 aa13.61□□□□□ -0.23
TOP3A-220ENST00000585031 HNRNPCP07910 306 aaKnown RBP eCLIP13.61□□□□□ -0.23
TOP3A-220ENST00000585031 H2AFB2P0C5Z0 115 aa13.61□□□□□ -0.23
TOP3A-220ENST00000585031 TRAPPC2P0DI81 140 aa13.61□□□□□ -0.23
TOP3A-220ENST00000585031 TRAPPC2BP0DI82 140 aa13.61□□□□□ -0.23
TOP3A-220ENST00000585031 CT45A6P0DMU7 189 aa13.61□□□□□ -0.23
TOP3A-220ENST00000585031 CT45A5P0DMU8 189 aa13.61□□□□□ -0.23
TOP3A-220ENST00000585031 CT45A7P0DMV0 189 aa13.61□□□□□ -0.23
TOP3A-220ENST00000585031 SSBP2P81877 361 aaPredicted RBP13.61□□□□□ -0.23
TOP3A-220ENST00000585031 MPV17LQ2QL34 196 aa13.61□□□□□ -0.23
TOP3A-220ENST00000585031 OR5T1Q8NG75 326 aa13.61□□□□□ -0.23
TOP3A-220ENST00000585031 OR4C16Q8NGL9 310 aa13.61□□□□□ -0.23
TOP3A-220ENST00000585031 ARHGAP5-AS1Q96IT6 56 aa13.61□□□□□ -0.23
TOP3A-220ENST00000585031 PECRQ9BY49 303 aa13.61□□□□□ -0.23
TOP3A-220ENST00000585031 PARP12Q9H0J9 701 aaKnown RBP13.61□□□□□ -0.23
TOP3A-220ENST00000585031 SRD5A3Q9H8P0 318 aa13.61□□□□□ -0.23
TOP3A-220ENST00000585031 NUDT15Q9NV35 164 aa13.61□□□□□ -0.23
TOP3A-220ENST00000585031 HSF4Q9ULV5 492 aa13.61□□□□□ -0.23
TOP3A-220ENST00000585031 DNAH11Q96DT5 4516 aa13.61□□□□□ -0.23
TOP3A-220ENST00000585031 CXorf65A6NEN9 183 aa13.6□□□□□ -0.23
TOP3A-220ENST00000585031 NUPR2A6NF83 97 aa13.6□□□□□ -0.23
TOP3A-220ENST00000585031 FOXI3A8MTJ6 420 aaPredicted RBP13.6□□□□□ -0.23
TOP3A-220ENST00000585031 EDN2P20800 178 aa13.6□□□□□ -0.23
TOP3A-220ENST00000585031 HLA-DMAP28067 261 aa13.6□□□□□ -0.23
TOP3A-220ENST00000585031 CCR6P51684 374 aa13.6□□□□□ -0.23
TOP3A-220ENST00000585031 MRPS15P82914 257 aaKnown RBP13.6□□□□□ -0.23
TOP3A-220ENST00000585031 PLGLAQ15195 96 aa13.6□□□□□ -0.23
TOP3A-220ENST00000585031 TATDN3Q17R31 274 aa13.6□□□□□ -0.23
TOP3A-220ENST00000585031 TMEM30BQ3MIR4 351 aa13.6□□□□□ -0.23
TOP3A-220ENST00000585031 CD300EQ496F6 205 aaPredicted RBP13.6□□□□□ -0.23
TOP3A-220ENST00000585031 PLAC9Q5JTB6 97 aa13.6□□□□□ -0.23
TOP3A-220ENST00000585031 C6orf183Q5T699 404 aa13.6□□□□□ -0.23
TOP3A-220ENST00000585031 ZNF562Q6V9R5 426 aa13.6□□□□□ -0.23
TOP3A-220ENST00000585031 LINC00596Q86U02 117 aa13.6□□□□□ -0.23
TOP3A-220ENST00000585031 AKAP14Q86UN6 197 aa13.6□□□□□ -0.23
TOP3A-220ENST00000585031 NUDCD2Q8WVJ2 157 aa13.6□□□□□ -0.23
TOP3A-220ENST00000585031 IFI27L2Q9H2X8 130 aa13.6□□□□□ -0.23
TOP3A-220ENST00000585031 PLEKHJ1Q9NW61 149 aa13.6□□□□□ -0.23
TOP3A-220ENST00000585031 RNF150Q9ULK6 438 aa13.6□□□□□ -0.23
TOP3A-220ENST00000585031 C13orf42A0A1B0GVH6 325 aa13.59□□□□□ -0.23
TOP3A-220ENST00000585031 DISC1C4P0D8 188 aa13.59□□□□□ -0.23
TOP3A-220ENST00000585031 PRAF2O60831 178 aa13.59□□□□□ -0.23
TOP3A-220ENST00000585031 CNIH1O95406 144 aa13.59□□□□□ -0.23
TOP3A-220ENST00000585031 CA2P00918 260 aa13.59□□□□□ -0.23
TOP3A-220ENST00000585031 CD74P04233 296 aa13.59□□□□□ -0.23
TOP3A-220ENST00000585031 CD3DP04234 171 aa13.59□□□□□ -0.23
TOP3A-220ENST00000585031 TMEM50BP56557 158 aa13.59□□□□□ -0.23
TOP3A-220ENST00000585031 RBMS2Q15434 407 aaKnown RBP13.59□□□□□ -0.23
TOP3A-220ENST00000585031 RPL39P5Q59GN2 51 aa13.59□□□□□ -0.23
TOP3A-220ENST00000585031 RNASE10Q5GAN6 216 aaKnown RBP13.59□□□□□ -0.23
TOP3A-220ENST00000585031 CEMP1Q6PRD7 247 aaPredicted RBP13.59□□□□□ -0.23
TOP3A-220ENST00000585031 C20orf85Q9H1P6 137 aa13.59□□□□□ -0.23
TOP3A-220ENST00000585031 ZNF355PQ9NSJ1 428 aa13.59□□□□□ -0.23
TOP3A-220ENST00000585031 MBNL3Q9NUK0 354 aaKnown RBP13.59□□□□□ -0.23
TOP3A-220ENST00000585031 SLC23A1Q9UHI7 598 aa13.59□□□□□ -0.23
TOP3A-220ENST00000585031 SCP2D1Q9UJQ7 156 aa13.59□□□□□ -0.23
TOP3A-220ENST00000585031 TRAV6A0A075B6T7 132 aa13.58□□□□□ -0.24
TOP3A-220ENST00000585031 HMX3A6NHT5 357 aa13.58□□□□□ -0.24
TOP3A-220ENST00000585031 OR11H12B2RN74 326 aa13.58□□□□□ -0.24
TOP3A-220ENST00000585031 H0YJW9 148 aa13.58□□□□□ -0.24
TOP3A-220ENST00000585031 PSG5Q15238 335 aa13.58□□□□□ -0.24
TOP3A-220ENST00000585031 METTL1Q9UBP6 276 aaKnown RBP13.58□□□□□ -0.24
TOP3A-220ENST00000585031 ANAPC10Q9UM13 185 aa13.58□□□□□ -0.24
TOP3A-220ENST00000585031 ALG5Q9Y673 324 aa13.58□□□□□ -0.24
TOP3A-220ENST00000585031 PKD1P98161 4303 aa13.58□□□□□ -0.24
TOP3A-220ENST00000585031 A0A0J9YWU9 116 aa13.57□□□□□ -0.24
TOP3A-220ENST00000585031 UBE2QL1A1L167 161 aa13.57□□□□□ -0.24
TOP3A-220ENST00000585031 MCRIP1C9JLW8 97 aa13.57□□□□□ -0.24
TOP3A-220ENST00000585031 ST8SIA5O15466 376 aa13.57□□□□□ -0.24
TOP3A-220ENST00000585031 SSX5O60225 188 aa13.57□□□□□ -0.24
TOP3A-220ENST00000585031 YPEL1O60688 119 aa13.57□□□□□ -0.24
TOP3A-220ENST00000585031 PDCD6O75340 191 aa13.57□□□□□ -0.24
TOP3A-220ENST00000585031 NDUFB6O95139 128 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms