RNA–Protein interactions for RNA: ENST00000584063.5

CDK5RAP3-231, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,759 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-231ENST00000584063 WSB1Q9Y6I7 421 aa9.76□□□□□ -0.85
CDK5RAP3-231ENST00000584063 TRAPPC2LH3BP13 241 aa9.75□□□□□ -0.85
CDK5RAP3-231ENST00000584063 TM4SF5O14894 197 aa9.75□□□□□ -0.85
CDK5RAP3-231ENST00000584063 DEFA4P12838 97 aa9.75□□□□□ -0.85
CDK5RAP3-231ENST00000584063 FOXC1Q12948 553 aa9.75□□□□□ -0.85
CDK5RAP3-231ENST00000584063 IL13RA2Q14627 380 aa9.75□□□□□ -0.85
CDK5RAP3-231ENST00000584063 C4orf48Q5BLP8 95 aa9.75□□□□□ -0.85
CDK5RAP3-231ENST00000584063 HEPN1Q6WQI6 88 aa9.75□□□□□ -0.85
CDK5RAP3-231ENST00000584063 MTURNQ8N3F0 131 aa9.75□□□□□ -0.85
CDK5RAP3-231ENST00000584063 TMEM222Q9H0R3 208 aa9.75□□□□□ -0.85
CDK5RAP3-231ENST00000584063 ZNF665Q9H7R5 613 aa9.75□□□□□ -0.85
CDK5RAP3-231ENST00000584063 KLF13Q9Y2Y9 288 aaPredicted RBP9.75□□□□□ -0.85
CDK5RAP3-231ENST00000584063 IGKV1-6A0A0C4DH72 117 aa9.75□□□□□ -0.85
CDK5RAP3-231ENST00000584063 RAB29O14966 203 aa9.75□□□□□ -0.85
CDK5RAP3-231ENST00000584063 IL18BPO95998 194 aa9.75□□□□□ -0.85
CDK5RAP3-231ENST00000584063 MMP7P09237 267 aaPredicted RBP9.75□□□□□ -0.85
CDK5RAP3-231ENST00000584063 NBL1P41271 181 aa9.75□□□□□ -0.85
CDK5RAP3-231ENST00000584063 ICAM4Q14773 271 aa9.75□□□□□ -0.85
CDK5RAP3-231ENST00000584063 OR1N2Q8NGR9 330 aa9.75□□□□□ -0.85
CDK5RAP3-231ENST00000584063 MUCL1Q96DR8 90 aa9.75□□□□□ -0.85
CDK5RAP3-231ENST00000584063 JPT1Q9UK76 154 aa9.75□□□□□ -0.85
CDK5RAP3-231ENST00000584063 SLC22A20A6NK97 555 aa9.75□□□□□ -0.85
CDK5RAP3-231ENST00000584063 SYNGR4O95473 234 aa9.75□□□□□ -0.85
CDK5RAP3-231ENST00000584063 CRYGBP07316 175 aa9.75□□□□□ -0.85
CDK5RAP3-231ENST00000584063 SOD3P08294 240 aa9.75□□□□□ -0.85
CDK5RAP3-231ENST00000584063 SRP19P09132 144 aaKnown RBP9.75□□□□□ -0.85
CDK5RAP3-231ENST00000584063 ELOBQ15370 118 aa9.75□□□□□ -0.85
CDK5RAP3-231ENST00000584063 HMGN3Q15651 99 aa9.75□□□□□ -0.85
CDK5RAP3-231ENST00000584063 Q6ZSR3 168 aa9.75□□□□□ -0.85
CDK5RAP3-231ENST00000584063 MRPL52Q86TS9 123 aaKnown RBP9.75□□□□□ -0.85
CDK5RAP3-231ENST00000584063 OR8I2Q8N0Y5 310 aa9.75□□□□□ -0.85
CDK5RAP3-231ENST00000584063 SLC45A2Q9UMX9 530 aa9.75□□□□□ -0.85
CDK5RAP3-231ENST00000584063 CDS2O95674 445 aa9.74□□□□□ -0.85
CDK5RAP3-231ENST00000584063 PSG2P11465 335 aa9.74□□□□□ -0.85
CDK5RAP3-231ENST00000584063 FABP4P15090 132 aa9.74□□□□□ -0.85
CDK5RAP3-231ENST00000584063 LHX2P50458 406 aa9.74□□□□□ -0.85
CDK5RAP3-231ENST00000584063 Q6ZRM9 215 aa9.74□□□□□ -0.85
CDK5RAP3-231ENST00000584063 TCF24Q7RTU0 167 aa9.74□□□□□ -0.85
CDK5RAP3-231ENST00000584063 RBMXL1Q96E39 390 aaKnown RBP9.74□□□□□ -0.85
CDK5RAP3-231ENST00000584063 HSPB7Q9UBY9 170 aa9.74□□□□□ -0.85
CDK5RAP3-231ENST00000584063 TMED3Q9Y3Q3 217 aa9.74□□□□□ -0.85
CDK5RAP3-231ENST00000584063 FAM90A20PA6NIJ5 464 aa9.74□□□□□ -0.85
CDK5RAP3-231ENST00000584063 ZNF732B4DXR9 585 aa9.74□□□□□ -0.85
CDK5RAP3-231ENST00000584063 ECI1P42126 302 aa9.74□□□□□ -0.85
CDK5RAP3-231ENST00000584063 ERVFC1-1P60608 527 aa9.74□□□□□ -0.85
CDK5RAP3-231ENST00000584063 RHEBQ15382 184 aa9.74□□□□□ -0.85
CDK5RAP3-231ENST00000584063 TMEM42Q69YG0 159 aa9.74□□□□□ -0.85
CDK5RAP3-231ENST00000584063 PLEKHF2Q9H8W4 249 aa9.74□□□□□ -0.85
CDK5RAP3-231ENST00000584063 OR1A1Q9P1Q5 309 aa9.74□□□□□ -0.85
CDK5RAP3-231ENST00000584063 PTPRQQ9UMZ3 2332 aa9.74□□□□□ -0.85
CDK5RAP3-231ENST00000584063 HIST1H2BKO60814 126 aa9.73□□□□□ -0.85
CDK5RAP3-231ENST00000584063 TFF1P04155 84 aa9.73□□□□□ -0.85
CDK5RAP3-231ENST00000584063 HIST1H2BJP06899 126 aa9.73□□□□□ -0.85
CDK5RAP3-231ENST00000584063 CD55P08174 381 aa9.73□□□□□ -0.85
CDK5RAP3-231ENST00000584063 HIST1H2BOP23527 126 aa9.73□□□□□ -0.85
CDK5RAP3-231ENST00000584063 IL2RGP31785 369 aa9.73□□□□□ -0.85
CDK5RAP3-231ENST00000584063 HIST1H2BBP33778 126 aa9.73□□□□□ -0.85
CDK5RAP3-231ENST00000584063 FUT6P51993 359 aa9.73□□□□□ -0.85
CDK5RAP3-231ENST00000584063 HIST1H2BDP58876 126 aa9.73□□□□□ -0.85
CDK5RAP3-231ENST00000584063 HIST1H2BCP62807 126 aa9.73□□□□□ -0.85
CDK5RAP3-231ENST00000584063 ADORA2A-AS1P86434 159 aa9.73□□□□□ -0.85
CDK5RAP3-231ENST00000584063 BAXQ07812 192 aa9.73□□□□□ -0.85
CDK5RAP3-231ENST00000584063 PRDX4Q13162 271 aa9.73□□□□□ -0.85
CDK5RAP3-231ENST00000584063 HIST2H2BEQ16778 126 aa9.73□□□□□ -0.85
CDK5RAP3-231ENST00000584063 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.73□□□□□ -0.85
CDK5RAP3-231ENST00000584063 HIST1H2BHQ93079 126 aa9.73□□□□□ -0.85
CDK5RAP3-231ENST00000584063 HIST1H2BNQ99877 126 aa9.73□□□□□ -0.85
CDK5RAP3-231ENST00000584063 HIST1H2BMQ99879 126 aa9.73□□□□□ -0.85
CDK5RAP3-231ENST00000584063 GCM1Q9NP62 436 aa9.73□□□□□ -0.85
CDK5RAP3-231ENST00000584063 ZNF816-ZNF321PA0A0X1KG74 233 aa9.73□□□□□ -0.85
CDK5RAP3-231ENST00000584063 OR7C2O60412 319 aa9.73□□□□□ -0.85
CDK5RAP3-231ENST00000584063 ARL16Q0P5N6 197 aa9.73□□□□□ -0.85
CDK5RAP3-231ENST00000584063 ZNF266Q14584 549 aa9.73□□□□□ -0.85
CDK5RAP3-231ENST00000584063 SPINK9Q5DT21 86 aa9.73□□□□□ -0.85
CDK5RAP3-231ENST00000584063 FFAR4Q5NUL3 377 aa9.73□□□□□ -0.85
CDK5RAP3-231ENST00000584063 TMEM178AQ8NBL3 297 aa9.73□□□□□ -0.85
CDK5RAP3-231ENST00000584063 MDS2Q8NDY4 140 aa9.73□□□□□ -0.85
CDK5RAP3-231ENST00000584063 LYRM2Q9NU23 88 aaPredicted RBP9.73□□□□□ -0.85
CDK5RAP3-231ENST00000584063 TAAR3PQ9P1P4 343 aa9.73□□□□□ -0.85
CDK5RAP3-231ENST00000584063 TRGV5A0A0B4J1U4 118 aa9.72□□□□□ -0.85
CDK5RAP3-231ENST00000584063 SMIM9A6NGZ8 99 aa9.72□□□□□ -0.85
CDK5RAP3-231ENST00000584063 A8MZ25 164 aa9.72□□□□□ -0.85
CDK5RAP3-231ENST00000584063 KRTAP27-1Q3LI81 207 aa9.72□□□□□ -0.85
CDK5RAP3-231ENST00000584063 OR2T2Q6IF00 324 aa9.72□□□□□ -0.85
CDK5RAP3-231ENST00000584063 NEU4Q8WWR8 484 aaPredicted RBP9.72□□□□□ -0.85
CDK5RAP3-231ENST00000584063 FRZBQ92765 325 aa9.72□□□□□ -0.85
CDK5RAP3-231ENST00000584063 NIPSNAP3BQ9BS92 247 aa9.72□□□□□ -0.85
CDK5RAP3-231ENST00000584063 RPRMQ9NS64 109 aa9.72□□□□□ -0.85
CDK5RAP3-231ENST00000584063 AURKAIP1Q9NWT8 199 aaPredicted RBP9.72□□□□□ -0.85
CDK5RAP3-231ENST00000584063 KCNS2Q9ULS6 477 aa9.72□□□□□ -0.85
CDK5RAP3-231ENST00000584063 PGA5P0DJD9 388 aa9.72□□□□□ -0.85
CDK5RAP3-231ENST00000584063 TESK1Q15569 626 aa9.72□□□□□ -0.85
CDK5RAP3-231ENST00000584063 UTF1Q5T230 341 aa9.72□□□□□ -0.85
CDK5RAP3-231ENST00000584063 TEX38Q6PEX7 206 aa9.72□□□□□ -0.85
CDK5RAP3-231ENST00000584063 MRGPRGQ86SM5 289 aa9.72□□□□□ -0.85
CDK5RAP3-231ENST00000584063 PLPPR1Q8TBJ4 325 aa9.72□□□□□ -0.85
CDK5RAP3-231ENST00000584063 GPR146Q96CH1 333 aa9.72□□□□□ -0.85
CDK5RAP3-231ENST00000584063 PRSS50Q9UI38 385 aa9.72□□□□□ -0.85
CDK5RAP3-231ENST00000584063 PTPRBP23467 1997 aa9.72□□□□□ -0.85
CDK5RAP3-231ENST00000584063 COL6A6A6NMZ7 2263 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms