RNA–Protein interactions for RNA: ENST00000583927.1

SKA2-208, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2

Gene SKA2, Length 533 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-208ENST00000583927 OR5B12Q96R08 314 aa7.62□□□□□ -1.19
SKA2-208ENST00000583927 ALX4Q9H161 411 aaPredicted RBP7.62□□□□□ -1.19
SKA2-208ENST00000583927 PLEKHA2Q9HB19 425 aa7.62□□□□□ -1.19
SKA2-208ENST00000583927 FAM212BQ9NTI7 297 aaPredicted RBP7.62□□□□□ -1.19
SKA2-208ENST00000583927 BET1LQ9NYM9 111 aa7.62□□□□□ -1.19
SKA2-208ENST00000583927 TAS2R8Q9NYW2 309 aa7.62□□□□□ -1.19
SKA2-208ENST00000583927 EHFQ9NZC4 300 aa7.62□□□□□ -1.19
SKA2-208ENST00000583927 COMMD3Q9UBI1 195 aa7.62□□□□□ -1.19
SKA2-208ENST00000583927 FAM223BA6NKX1 122 aa7.61□□□□□ -1.19
SKA2-208ENST00000583927 TEX22C9J3V5 150 aa7.61□□□□□ -1.19
SKA2-208ENST00000583927 ZNF735P0CB33 412 aa7.61□□□□□ -1.19
SKA2-208ENST00000583927 NQO2P16083 231 aa7.61□□□□□ -1.19
SKA2-208ENST00000583927 ZNF182P17025 639 aaPredicted RBP7.61□□□□□ -1.19
SKA2-208ENST00000583927 ELK1P19419 428 aa7.61□□□□□ -1.19
SKA2-208ENST00000583927 RFX2P48378 723 aa7.61□□□□□ -1.19
SKA2-208ENST00000583927 SLURP1P55000 103 aa7.61□□□□□ -1.19
SKA2-208ENST00000583927 HERV-K104P61576 105 aa7.61□□□□□ -1.19
SKA2-208ENST00000583927 LYSMD2Q8IV50 215 aa7.61□□□□□ -1.19
SKA2-208ENST00000583927 FAM223AQ8IWN6 122 aa7.61□□□□□ -1.19
SKA2-208ENST00000583927 SPAG16Q8N0X2 631 aa7.61□□□□□ -1.19
SKA2-208ENST00000583927 OR5H2Q8NGV7 314 aa7.61□□□□□ -1.19
SKA2-208ENST00000583927 PHB2Q99623 299 aa7.61□□□□□ -1.19
SKA2-208ENST00000583927 B9D2Q9BPU9 175 aa7.61□□□□□ -1.19
SKA2-208ENST00000583927 BCL7BQ9BQE9 202 aa7.61□□□□□ -1.19
SKA2-208ENST00000583927 ZNF355PQ9NSJ1 428 aa7.61□□□□□ -1.19
SKA2-208ENST00000583927 COMMD9Q9P000 198 aa7.61□□□□□ -1.19
SKA2-208ENST00000583927 ZNF257Q9Y2Q1 563 aa7.61□□□□□ -1.19
SKA2-208ENST00000583927 LSM4Q9Y4Z0 139 aaKnown RBP7.61□□□□□ -1.19
SKA2-208ENST00000583927 DNAH7Q8WXX0 4024 aa7.61□□□□□ -1.19
SKA2-208ENST00000583927 MEIS3P1A6NDR6 274 aa7.6□□□□□ -1.19
SKA2-208ENST00000583927 NPIPB5A8MRT5 1133 aa7.6□□□□□ -1.19
SKA2-208ENST00000583927 HPGDSO60760 199 aa7.6□□□□□ -1.19
SKA2-208ENST00000583927 IGHV3-11P01762 117 aa7.6□□□□□ -1.19
SKA2-208ENST00000583927 CRYGCP07315 174 aa7.6□□□□□ -1.19
SKA2-208ENST00000583927 RCVRNP35243 200 aa7.6□□□□□ -1.19
SKA2-208ENST00000583927 HRH1P35367 487 aa7.6□□□□□ -1.19
SKA2-208ENST00000583927 RPL27AP46776 148 aaKnown RBP7.6□□□□□ -1.19
SKA2-208ENST00000583927 UCP3P55916 312 aa7.6□□□□□ -1.19
SKA2-208ENST00000583927 FXYD4P59646 89 aa7.6□□□□□ -1.19
SKA2-208ENST00000583927 RPL8P62917 257 aaKnown RBP7.6□□□□□ -1.19
SKA2-208ENST00000583927 KLF5Q13887 457 aaPredicted RBP7.6□□□□□ -1.19
SKA2-208ENST00000583927 OR2B11Q5JQS5 317 aa7.6□□□□□ -1.19
SKA2-208ENST00000583927 LPCAT3Q6P1A2 487 aa7.6□□□□□ -1.19
SKA2-208ENST00000583927 GPR141Q7Z602 305 aa7.6□□□□□ -1.19
SKA2-208ENST00000583927 CMTM1Q8IZ96 169 aa7.6□□□□□ -1.19
SKA2-208ENST00000583927 NECAP1Q8NC96 275 aa7.6□□□□□ -1.19
SKA2-208ENST00000583927 OR6F1Q8NGZ6 308 aa7.6□□□□□ -1.19
SKA2-208ENST00000583927 C15orf40Q8WUR7 153 aa7.6□□□□□ -1.19
SKA2-208ENST00000583927 SRSF8Q9BRL6 282 aaKnown RBP7.6□□□□□ -1.19
SKA2-208ENST00000583927 ZNF2Q9BSG1 426 aaPredicted RBP7.6□□□□□ -1.19
SKA2-208ENST00000583927 NAA50Q9GZZ1 169 aaKnown RBP7.6□□□□□ -1.19
SKA2-208ENST00000583927 SLC2A9Q9NRM0 540 aa7.6□□□□□ -1.19
SKA2-208ENST00000583927 COA4Q9NYJ1 87 aa7.6□□□□□ -1.19
SKA2-208ENST00000583927 SIGLEC8Q9NYZ4 499 aa7.6□□□□□ -1.19
SKA2-208ENST00000583927 PEF1Q9UBV8 284 aaKnown RBP7.6□□□□□ -1.19
SKA2-208ENST00000583927 ZNF256Q9Y2P7 627 aaPredicted RBP7.6□□□□□ -1.19
SKA2-208ENST00000583927 TENM3Q9P273 2699 aa7.6□□□□□ -1.19
SKA2-208ENST00000583927 STAB2Q8WWQ8 2551 aa7.6□□□□□ -1.19
SKA2-208ENST00000583927 GPR31O00270 319 aa7.59□□□□□ -1.19
SKA2-208ENST00000583927 MPPED1O15442 326 aa7.59□□□□□ -1.19
SKA2-208ENST00000583927 TNFSF12O43508 249 aa7.59□□□□□ -1.19
SKA2-208ENST00000583927 RBMXL2O75526 392 aaKnown RBP7.59□□□□□ -1.19
SKA2-208ENST00000583927 PMP2P02689 132 aa7.59□□□□□ -1.19
SKA2-208ENST00000583927 F2RP25116 425 aa7.59□□□□□ -1.19
SKA2-208ENST00000583927 ECI1P42126 302 aa7.59□□□□□ -1.19
SKA2-208ENST00000583927 ZNF45Q02386 682 aa7.59□□□□□ -1.19
SKA2-208ENST00000583927 VAX1Q5SQQ9 334 aa7.59□□□□□ -1.19
SKA2-208ENST00000583927 THOC7Q6I9Y2 204 aaKnown RBP7.59□□□□□ -1.19
SKA2-208ENST00000583927 OR4A47Q6IF82 309 aa7.59□□□□□ -1.19
SKA2-208ENST00000583927 TMEM17Q86X19 198 aa7.59□□□□□ -1.19
SKA2-208ENST00000583927 VKORC1L1Q8N0U8 176 aa7.59□□□□□ -1.19
SKA2-208ENST00000583927 OR6Q1Q8NGQ2 317 aa7.59□□□□□ -1.19
SKA2-208ENST00000583927 RAB2BQ8WUD1 216 aa7.59□□□□□ -1.19
SKA2-208ENST00000583927 GPHA2Q96T91 129 aa7.59□□□□□ -1.19
SKA2-208ENST00000583927 ELOVL1Q9BW60 279 aa7.59□□□□□ -1.19
SKA2-208ENST00000583927 HUWE1Q7Z6Z7 4374 aaKnown RBP7.59□□□□□ -1.19
SKA2-208ENST00000583927 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.58□□□□□ -1.2
SKA2-208ENST00000583927 A0A1B0GW64 132 aa7.58□□□□□ -1.2
SKA2-208ENST00000583927 E7EUB6 86 aa7.58□□□□□ -1.2
SKA2-208ENST00000583927 UPK2O00526 184 aa7.58□□□□□ -1.2
SKA2-208ENST00000583927 SAP30O75446 220 aa7.58□□□□□ -1.2
SKA2-208ENST00000583927 PGLYRP1O75594 196 aaPredicted RBP7.58□□□□□ -1.2
SKA2-208ENST00000583927 DHFRP00374 187 aa7.58□□□□□ -1.2
SKA2-208ENST00000583927 IGLV1-51P01701 117 aa7.58□□□□□ -1.2
SKA2-208ENST00000583927 FCER2P06734 321 aa7.58□□□□□ -1.2
SKA2-208ENST00000583927 CTRB1P17538 263 aa7.58□□□□□ -1.2
SKA2-208ENST00000583927 HLA-GP17693 338 aa7.58□□□□□ -1.2
SKA2-208ENST00000583927 TBPP20226 339 aa7.58□□□□□ -1.2
SKA2-208ENST00000583927 PTBP1P26599 531 aaKnown RBP eCLIP7.58□□□□□ -1.21e-9■■■■■ 38.2
SKA2-208ENST00000583927 HLA-DMAP28067 261 aa7.58□□□□□ -1.2
SKA2-208ENST00000583927 TMBIM6P55061 237 aa7.58□□□□□ -1.2
SKA2-208ENST00000583927 RHOGP84095 191 aa7.58□□□□□ -1.2
SKA2-208ENST00000583927 SSBP1Q04837 148 aaKnown RBP7.58□□□□□ -1.2
SKA2-208ENST00000583927 DEFB121Q5J5C9 76 aa7.58□□□□□ -1.2
SKA2-208ENST00000583927 C10orf55Q5SWW7 151 aa7.58□□□□□ -1.2
SKA2-208ENST00000583927 AADACL3Q5VUY0 350 aa7.58□□□□□ -1.2
SKA2-208ENST00000583927 CTRB2Q6GPI1 263 aa7.58□□□□□ -1.2
SKA2-208ENST00000583927 OR51H1Q8NH63 302 aa7.58□□□□□ -1.2
SKA2-208ENST00000583927 DGCR14Q96DF8 476 aaKnown RBP7.58□□□□□ -1.2
SKA2-208ENST00000583927 FYTTD1Q96QD9 318 aaKnown RBP7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms