RNA–Protein interactions for RNA: ENST00000583595.1

SS18-223, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 3

Gene SS18, Length 375 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-223ENST00000583595 OR6K6Q8NGW6 343 aa3.65□□□□□ -1.83
SS18-223ENST00000583595 OR4X1Q8NH49 305 aa3.65□□□□□ -1.83
SS18-223ENST00000583595 GPR146Q96CH1 333 aa3.65□□□□□ -1.83
SS18-223ENST00000583595 CIB3Q96Q77 187 aaPredicted RBP3.65□□□□□ -1.83
SS18-223ENST00000583595 OR2V2Q96R30 315 aa3.65□□□□□ -1.83
SS18-223ENST00000583595 IMMP2LQ96T52 175 aa3.65□□□□□ -1.83
SS18-223ENST00000583595 P2RX4Q99571 388 aa3.65□□□□□ -1.83
SS18-223ENST00000583595 ARHGDIGQ99819 225 aa3.65□□□□□ -1.83
SS18-223ENST00000583595 ZNF649Q9BS31 505 aa3.65□□□□□ -1.83
SS18-223ENST00000583595 AGMATQ9BSE5 352 aa3.65□□□□□ -1.83
SS18-223ENST00000583595 EIF5A2Q9GZV4 153 aaKnown RBP3.65□□□□□ -1.83
SS18-223ENST00000583595 TAF9BQ9HBM6 251 aa3.65□□□□□ -1.83
SS18-223ENST00000583595 BET1LQ9NYM9 111 aa3.65□□□□□ -1.83
SS18-223ENST00000583595 ZNF581Q9P0T4 197 aa3.65□□□□□ -1.83
SS18-223ENST00000583595 VPS29Q9UBQ0 182 aa3.65□□□□□ -1.83
SS18-223ENST00000583595 TBX21Q9UL17 535 aa3.65□□□□□ -1.83
SS18-223ENST00000583595 RAB22AQ9UL26 194 aa3.65□□□□□ -1.83
SS18-223ENST00000583595 C14orf166Q9Y224 244 aaKnown RBP3.65□□□□□ -1.83
SS18-223ENST00000583595 CSAG2Q9Y5P2 127 aa3.65□□□□□ -1.83
SS18-223ENST00000583595 SLC25A15Q9Y619 301 aa3.65□□□□□ -1.83
SS18-223ENST00000583595 URGCP-MRPS24S4R325 110 aa3.65□□□□□ -1.83
SS18-223ENST00000583595 MIA3Q5JRA6 1907 aa3.64□□□□□ -1.83
SS18-223ENST00000583595 ZNF727A8MUV8 499 aa3.64□□□□□ -1.83
SS18-223ENST00000583595 F5H5T6 163 aa3.64□□□□□ -1.83
SS18-223ENST00000583595 PRAMEF26H0Y7S4 382 aa3.64□□□□□ -1.83
SS18-223ENST00000583595 CLDN34H7C241 214 aa3.64□□□□□ -1.83
SS18-223ENST00000583595 CRLF1O75462 422 aa3.64□□□□□ -1.83
SS18-223ENST00000583595 GCM2O75603 506 aaPredicted RBP3.64□□□□□ -1.83
SS18-223ENST00000583595 TRAPPC6AO75865 159 aa3.64□□□□□ -1.83
SS18-223ENST00000583595 CPSF4O95639 269 aaKnown RBP3.64□□□□□ -1.83
SS18-223ENST00000583595 IGHV3-13P01766 116 aa3.64□□□□□ -1.83
SS18-223ENST00000583595 OR10J4P0C629 311 aa3.64□□□□□ -1.83
SS18-223ENST00000583595 PET100P0DJ07 73 aa3.64□□□□□ -1.83
SS18-223ENST00000583595 OR13C7P0DN81 318 aa3.64□□□□□ -1.83
SS18-223ENST00000583595 ZNF19P17023 458 aa3.64□□□□□ -1.83
SS18-223ENST00000583595 RPS4Y1P22090 263 aaKnown RBP3.64□□□□□ -1.83
SS18-223ENST00000583595 USF1P22415 310 aaPredicted RBP3.64□□□□□ -1.83
SS18-223ENST00000583595 COX7A1P24310 79 aa3.64□□□□□ -1.83
SS18-223ENST00000583595 MDH2P40926 338 aaKnown RBP3.64□□□□□ -1.83
SS18-223ENST00000583595 OR1E2P47887 323 aa3.64□□□□□ -1.83
SS18-223ENST00000583595 RPL34P49207 117 aaKnown RBP3.64□□□□□ -1.83
SS18-223ENST00000583595 PRLHRP49683 370 aa3.64□□□□□ -1.83
SS18-223ENST00000583595 DHRS2Q13268 280 aa3.64□□□□□ -1.83
SS18-223ENST00000583595 ZNF266Q14584 549 aa3.64□□□□□ -1.83
SS18-223ENST00000583595 TAL2Q16559 108 aa3.64□□□□□ -1.83
SS18-223ENST00000583595 ZNF791Q3KP31 576 aaPredicted RBP3.64□□□□□ -1.83
SS18-223ENST00000583595 ARL9Q6T311 187 aa3.64□□□□□ -1.83
SS18-223ENST00000583595 CLEC18BQ6UXF7 455 aa3.64□□□□□ -1.83
SS18-223ENST00000583595 WDR82Q6UXN9 313 aa3.64□□□□□ -1.83
SS18-223ENST00000583595 RFLNAQ6ZTI6 216 aa3.64□□□□□ -1.83
SS18-223ENST00000583595 LINC00173Q6ZV60 143 aa3.64□□□□□ -1.83
SS18-223ENST00000583595 MOB1BQ7L9L4 216 aa3.64□□□□□ -1.83
SS18-223ENST00000583595 GLT6D1Q7Z4J2 308 aa3.64□□□□□ -1.83
SS18-223ENST00000583595 TMEM144Q7Z5S9 345 aa3.64□□□□□ -1.83
SS18-223ENST00000583595 NIT1Q86X76 327 aa3.64□□□□□ -1.83
SS18-223ENST00000583595 C20orf196Q8IYI0 205 aa3.64□□□□□ -1.83
SS18-223ENST00000583595 ZNF101Q8IZC7 436 aa3.64□□□□□ -1.83
SS18-223ENST00000583595 ZDHHC22Q8N966 263 aa3.64□□□□□ -1.83
SS18-223ENST00000583595 TMEM229BQ8NBD8 167 aa3.64□□□□□ -1.83
SS18-223ENST00000583595 OR8G5Q8NG78 346 aa3.64□□□□□ -1.83
SS18-223ENST00000583595 OR4B1Q8NGF8 309 aa3.64□□□□□ -1.83
SS18-223ENST00000583595 MFSD8Q8NHS3 518 aa3.64□□□□□ -1.83
SS18-223ENST00000583595 GPR119Q8TDV5 335 aa3.64□□□□□ -1.83
SS18-223ENST00000583595 GTSF1Q8WW33 167 aa3.64□□□□□ -1.83
SS18-223ENST00000583595 TMEM239Q8WW34 195 aa3.64□□□□□ -1.83
SS18-223ENST00000583595 TRIB3Q96RU7 358 aa3.64□□□□□ -1.83
SS18-223ENST00000583595 GABRG3Q99928 467 aa3.64□□□□□ -1.83
SS18-223ENST00000583595 VGLL1Q99990 258 aa3.64□□□□□ -1.83
SS18-223ENST00000583595 TIMM29Q9BSF4 260 aa3.64□□□□□ -1.83
SS18-223ENST00000583595 OR11A1Q9GZK7 315 aa3.64□□□□□ -1.83
SS18-223ENST00000583595 UQCR10Q9UDW1 63 aa3.64□□□□□ -1.83
SS18-223ENST00000583595 ZNF107Q9UII5 783 aaPredicted RBP3.64□□□□□ -1.83
SS18-223ENST00000583595 CLEC4EQ9ULY5 219 aa3.64□□□□□ -1.83
SS18-223ENST00000583595 SLC22A13Q9Y226 551 aa3.64□□□□□ -1.83
SS18-223ENST00000583595 FUT9Q9Y231 359 aa3.64□□□□□ -1.83
SS18-223ENST00000583595 LAMTOR2Q9Y2Q5 125 aa3.64□□□□□ -1.83
SS18-223ENST00000583595 PCNTO95613 3336 aa3.64□□□□□ -1.83
SS18-223ENST00000583595 NUP98P52948 1817 aa3.63□□□□□ -1.83
SS18-223ENST00000583595 PATJQ8NI35 1801 aa3.63□□□□□ -1.83
SS18-223ENST00000583595 NDUFAF8A1L188 74 aa3.63□□□□□ -1.83
SS18-223ENST00000583595 SRRM5B3KS81 715 aa3.63□□□□□ -1.83
SS18-223ENST00000583595 H3BQ15 152 aa3.63□□□□□ -1.83
SS18-223ENST00000583595 H7C1H1 209 aa3.63□□□□□ -1.83
SS18-223ENST00000583595 J3QRE1 110 aa3.63□□□□□ -1.83
SS18-223ENST00000583595 OR7C2O60412 319 aa3.63□□□□□ -1.83
SS18-223ENST00000583595 CNMDO75829 334 aa3.63□□□□□ -1.83
SS18-223ENST00000583595 MT-CO2P00403 227 aa3.63□□□□□ -1.83
SS18-223ENST00000583595 OPN1SWP03999 348 aa3.63□□□□□ -1.83
SS18-223ENST00000583595 CSN2P05814 226 aa3.63□□□□□ -1.83
SS18-223ENST00000583595 RHOCP08134 193 aa3.63□□□□□ -1.83
SS18-223ENST00000583595 SEC11BP0C7V7 166 aa3.63□□□□□ -1.83
SS18-223ENST00000583595 ZNF286BP0CG31 522 aa3.63□□□□□ -1.83
SS18-223ENST00000583595 CRYBA4P53673 196 aa3.63□□□□□ -1.83
SS18-223ENST00000583595 OR12D2P58182 307 aa3.63□□□□□ -1.83
SS18-223ENST00000583595 TAS2R31P59538 309 aa3.63□□□□□ -1.83
SS18-223ENST00000583595 UBE2NP61088 152 aaKnown RBP3.63□□□□□ -1.83
SS18-223ENST00000583595 HMGCS1Q01581 520 aa3.63□□□□□ -1.83
SS18-223ENST00000583595 RAB31Q13636 194 aa3.63□□□□□ -1.83
SS18-223ENST00000583595 ENDOGQ14249 297 aaKnown RBP3.63□□□□□ -1.83
SS18-223ENST00000583595 GPNMBQ14956 572 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms