RNA–Protein interactions for RNA: ENST00000583363.5

CDK5RAP3-228, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 558 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-228ENST00000583363 SRSF2Q01130 221 aaKnown RBP13.04□□□□□ -0.32
CDK5RAP3-228ENST00000583363 FCN2Q15485 313 aa13.04□□□□□ -0.32
CDK5RAP3-228ENST00000583363 VMA21Q3ZAQ7 101 aa13.04□□□□□ -0.32
CDK5RAP3-228ENST00000583363 OR4A47Q6IF82 309 aa13.04□□□□□ -0.32
CDK5RAP3-228ENST00000583363 Q6ZRM9 215 aa13.04□□□□□ -0.32
CDK5RAP3-228ENST00000583363 H2BFWTQ7Z2G1 175 aa13.04□□□□□ -0.32
CDK5RAP3-228ENST00000583363 OR8H1Q8NGG4 311 aa13.04□□□□□ -0.32
CDK5RAP3-228ENST00000583363 SSMEM1Q8WWF3 244 aa13.04□□□□□ -0.32
CDK5RAP3-228ENST00000583363 OR2A7Q96R45 310 aa13.04□□□□□ -0.32
CDK5RAP3-228ENST00000583363 TMEM140Q9NV12 185 aa13.04□□□□□ -0.32
CDK5RAP3-228ENST00000583363 BET1LQ9NYM9 111 aa13.04□□□□□ -0.32
CDK5RAP3-228ENST00000583363 C1RLQ9NZP8 487 aa13.04□□□□□ -0.32
CDK5RAP3-228ENST00000583363 hCG_2014768A0A024R1R8 64 aa13.03□□□□□ -0.32
CDK5RAP3-228ENST00000583363 HMX3A6NHT5 357 aa13.03□□□□□ -0.32
CDK5RAP3-228ENST00000583363 MPTX1A8MV57 137 aa13.03□□□□□ -0.32
CDK5RAP3-228ENST00000583363 UPK2O00526 184 aa13.03□□□□□ -0.32
CDK5RAP3-228ENST00000583363 RRHO14718 337 aa13.03□□□□□ -0.32
CDK5RAP3-228ENST00000583363 NBR2O15453 112 aa13.03□□□□□ -0.32
CDK5RAP3-228ENST00000583363 SLC25A17O43808 307 aa13.03□□□□□ -0.32
CDK5RAP3-228ENST00000583363 OR2F2O95006 317 aa13.03□□□□□ -0.32
CDK5RAP3-228ENST00000583363 OR9G9P0C7N8 305 aa13.03□□□□□ -0.32
CDK5RAP3-228ENST00000583363 LY6EQ16553 131 aa13.03□□□□□ -0.32
CDK5RAP3-228ENST00000583363 IZUMO4Q1ZYL8 232 aa13.03□□□□□ -0.32
CDK5RAP3-228ENST00000583363 OR4A5Q8NH83 315 aa13.03□□□□□ -0.32
CDK5RAP3-228ENST00000583363 RNASE11Q8TAA1 199 aaKnown RBP13.03□□□□□ -0.32
CDK5RAP3-228ENST00000583363 VSTM2AQ8TAG5 236 aa13.03□□□□□ -0.32
CDK5RAP3-228ENST00000583363 C19orf24Q9BVV8 132 aa13.03□□□□□ -0.32
CDK5RAP3-228ENST00000583363 PITPNC1Q9UKF7 332 aa13.03□□□□□ -0.32
CDK5RAP3-228ENST00000583363 SIGLEC9Q9Y336 463 aa13.03□□□□□ -0.32
CDK5RAP3-228ENST00000583363 TRAV3A0A0B4J244 114 aa13.02□□□□□ -0.33
CDK5RAP3-228ENST00000583363 A0A1B0GU03 582 aa13.02□□□□□ -0.33
CDK5RAP3-228ENST00000583363 NCBP2LA6PVI3 153 aaKnown RBP13.02□□□□□ -0.33
CDK5RAP3-228ENST00000583363 CCSO14618 274 aa13.02□□□□□ -0.33
CDK5RAP3-228ENST00000583363 GOSR2O14653 212 aa13.02□□□□□ -0.33
CDK5RAP3-228ENST00000583363 HOXA3O43365 443 aaPredicted RBP13.02□□□□□ -0.33
CDK5RAP3-228ENST00000583363 SLC25A6P12236 298 aa13.02□□□□□ -0.33
CDK5RAP3-228ENST00000583363 MMDQ15546 238 aa13.02□□□□□ -0.33
CDK5RAP3-228ENST00000583363 MRGPRG-AS1Q2M3A8 158 aa13.02□□□□□ -0.33
CDK5RAP3-228ENST00000583363 RBMS3Q6XE24 437 aaKnown RBP13.02□□□□□ -0.33
CDK5RAP3-228ENST00000583363 TMEM219Q86XT9 240 aa13.02□□□□□ -0.33
CDK5RAP3-228ENST00000583363 TMEM86BQ8N661 226 aa13.02□□□□□ -0.33
CDK5RAP3-228ENST00000583363 Q8N9W7 124 aa13.02□□□□□ -0.33
CDK5RAP3-228ENST00000583363 OR11H7Q8NGC8 314 aa13.02□□□□□ -0.33
CDK5RAP3-228ENST00000583363 TMEM167AQ8TBQ9 72 aa13.02□□□□□ -0.33
CDK5RAP3-228ENST00000583363 OR10C1Q96KK4 312 aa13.02□□□□□ -0.33
CDK5RAP3-228ENST00000583363 SLC25A33Q9BSK2 321 aa13.02□□□□□ -0.33
CDK5RAP3-228ENST00000583363 FBXL15Q9H469 300 aa13.02□□□□□ -0.33
CDK5RAP3-228ENST00000583363 KIAA1456Q9P272 454 aa13.02□□□□□ -0.33
CDK5RAP3-228ENST00000583363 MGAT4CQ9UBM8 478 aa13.02□□□□□ -0.33
CDK5RAP3-228ENST00000583363 METTL1Q9UBP6 276 aaKnown RBP13.02□□□□□ -0.33
CDK5RAP3-228ENST00000583363 C13orf42A0A1B0GVH6 325 aa13.01□□□□□ -0.33
CDK5RAP3-228ENST00000583363 C5orf51A6NDU8 294 aa13.01□□□□□ -0.33
CDK5RAP3-228ENST00000583363 BTBD17A6NE02 478 aa13.01□□□□□ -0.33
CDK5RAP3-228ENST00000583363 KBTBD11O94819 623 aa13.01□□□□□ -0.33
CDK5RAP3-228ENST00000583363 SIX6O95475 246 aa13.01□□□□□ -0.33
CDK5RAP3-228ENST00000583363 CXCL3P19876 107 aa13.01□□□□□ -0.33
CDK5RAP3-228ENST00000583363 BCAP31P51572 246 aa13.01□□□□□ -0.33
CDK5RAP3-228ENST00000583363 RELBQ01201 579 aa13.01□□□□□ -0.33
CDK5RAP3-228ENST00000583363 C5orf64Q2M2E5 130 aa13.01□□□□□ -0.33
CDK5RAP3-228ENST00000583363 GSG1LQ6UXU4 331 aa13.01□□□□□ -0.33
CDK5RAP3-228ENST00000583363 C16orf82Q7Z2V1 217 aa13.01□□□□□ -0.33
CDK5RAP3-228ENST00000583363 OR5M8Q8NGP6 311 aa13.01□□□□□ -0.33
CDK5RAP3-228ENST00000583363 CHAC2Q8WUX2 184 aa13.01□□□□□ -0.33
CDK5RAP3-228ENST00000583363 RANBP3Q9H6Z4 567 aaPredicted RBP13.01□□□□□ -0.33
CDK5RAP3-228ENST00000583363 POMT1Q9Y6A1 747 aa13.01□□□□□ -0.33
CDK5RAP3-228ENST00000583363 FAM25EA8MYX2 175 aa13□□□□□ -0.33
CDK5RAP3-228ENST00000583363 HAX1O00165 279 aa13□□□□□ -0.33
CDK5RAP3-228ENST00000583363 FCN1O00602 326 aa13□□□□□ -0.33
CDK5RAP3-228ENST00000583363 PITX3O75364 302 aa13□□□□□ -0.33
CDK5RAP3-228ENST00000583363 SNAPC5O75971 98 aa13□□□□□ -0.33
CDK5RAP3-228ENST00000583363 SMCO1Q147U7 214 aa13□□□□□ -0.33
CDK5RAP3-228ENST00000583363 PRSS8Q16651 343 aa13□□□□□ -0.33
CDK5RAP3-228ENST00000583363 PPP1R27Q86WC6 154 aa13□□□□□ -0.33
CDK5RAP3-228ENST00000583363 FAM71E2Q8N5Q1 922 aa13□□□□□ -0.33
CDK5RAP3-228ENST00000583363 OR4A16Q8NH70 328 aa13□□□□□ -0.33
CDK5RAP3-228ENST00000583363 C2orf50Q96LR7 162 aa13□□□□□ -0.33
CDK5RAP3-228ENST00000583363 SPIN2AQ99865 258 aa13□□□□□ -0.33
CDK5RAP3-228ENST00000583363 SPIN2BQ9BPZ2 258 aa13□□□□□ -0.33
CDK5RAP3-228ENST00000583363 TPSG1Q9NRR2 321 aa13□□□□□ -0.33
CDK5RAP3-228ENST00000583363 TNFRSF19Q9NS68 423 aa13□□□□□ -0.33
CDK5RAP3-228ENST00000583363 CTNNBIP1Q9NSA3 81 aaPredicted RBP13□□□□□ -0.33
CDK5RAP3-228ENST00000583363 COA4Q9NYJ1 87 aa13□□□□□ -0.33
CDK5RAP3-228ENST00000583363 CACNG5Q9UF02 275 aa13□□□□□ -0.33
CDK5RAP3-228ENST00000583363 VPREB3Q9UKI3 123 aa13□□□□□ -0.33
CDK5RAP3-228ENST00000583363 NSG2Q9Y328 171 aa13□□□□□ -0.33
CDK5RAP3-228ENST00000583363 MOB4Q9Y3A3 225 aa13□□□□□ -0.33
CDK5RAP3-228ENST00000583363 FGF16O43320 207 aa12.99□□□□□ -0.33
CDK5RAP3-228ENST00000583363 AMY1AP04745 511 aa12.99□□□□□ -0.33
CDK5RAP3-228ENST00000583363 TRAPPC2P0DI81 140 aa12.99□□□□□ -0.33
CDK5RAP3-228ENST00000583363 TRAPPC2BP0DI82 140 aa12.99□□□□□ -0.33
CDK5RAP3-228ENST00000583363 H2BFSP57053 126 aa12.99□□□□□ -0.33
CDK5RAP3-228ENST00000583363 SRSF4Q08170 494 aaKnown RBP12.99□□□□□ -0.33
CDK5RAP3-228ENST00000583363 PJVKQ0ZLH3 352 aa12.99□□□□□ -0.33
CDK5RAP3-228ENST00000583363 IAH1Q2TAA2 248 aaPredicted RBP12.99□□□□□ -0.33
CDK5RAP3-228ENST00000583363 MMD2Q8IY49 270 aa12.99□□□□□ -0.33
CDK5RAP3-228ENST00000583363 C5orf56Q8N8D9 126 aa12.99□□□□□ -0.33
CDK5RAP3-228ENST00000583363 ZNF418Q8TF45 676 aaPredicted RBP12.99□□□□□ -0.33
CDK5RAP3-228ENST00000583363 RASL11BQ9BPW5 248 aa12.99□□□□□ -0.33
CDK5RAP3-228ENST00000583363 ZNF430Q9H8G1 570 aaPredicted RBP12.99□□□□□ -0.33
CDK5RAP3-228ENST00000583363 TNCP24821 2201 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms