RNA–Protein interactions for RNA: ENST00000582955.5

SMARCE1-218, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-218ENST00000582955 TMEM68Q96MH6 324 aa9.8□□□□□ -0.84
SMARCE1-218ENST00000582955 OR2A7Q96R45 310 aa9.8□□□□□ -0.84
SMARCE1-218ENST00000582955 AIFM2Q9BRQ8 373 aa9.8□□□□□ -0.84
SMARCE1-218ENST00000582955 TINAGL1Q9GZM7 467 aaPredicted RBP9.8□□□□□ -0.84
SMARCE1-218ENST00000582955 SLA2Q9H6Q3 261 aa9.8□□□□□ -0.84
SMARCE1-218ENST00000582955 NOTCH3Q9UM47 2321 aa9.79□□□□□ -0.84
SMARCE1-218ENST00000582955 RBFOX2O43251 390 aaKnown RBP eCLIP9.79□□□□□ -0.84
SMARCE1-218ENST00000582955 PGLYRP1O75594 196 aaPredicted RBP9.79□□□□□ -0.84
SMARCE1-218ENST00000582955 DUS4LO95620 317 aaKnown RBP9.79□□□□□ -0.84
SMARCE1-218ENST00000582955 HPRT1P00492 218 aa9.79□□□□□ -0.84
SMARCE1-218ENST00000582955 IGHV3-11P01762 117 aa9.79□□□□□ -0.84
SMARCE1-218ENST00000582955 TBPP20226 339 aa9.79□□□□□ -0.84
SMARCE1-218ENST00000582955 TAS2R19P59542 299 aa9.79□□□□□ -0.84
SMARCE1-218ENST00000582955 ASPHD1Q5U4P2 390 aa9.79□□□□□ -0.84
SMARCE1-218ENST00000582955 PUSL1Q8N0Z8 303 aaKnown RBP9.79□□□□□ -0.84
SMARCE1-218ENST00000582955 OR11H1Q8NG94 326 aa9.79□□□□□ -0.84
SMARCE1-218ENST00000582955 TMEM167AQ8TBQ9 72 aa9.79□□□□□ -0.84
SMARCE1-218ENST00000582955 CD300LFQ8TDQ1 290 aa9.79□□□□□ -0.84
SMARCE1-218ENST00000582955 DPF1Q92782 380 aa9.79□□□□□ -0.84
SMARCE1-218ENST00000582955 SPIN2AQ99865 258 aa9.79□□□□□ -0.84
SMARCE1-218ENST00000582955 SPIN2BQ9BPZ2 258 aa9.79□□□□□ -0.84
SMARCE1-218ENST00000582955 HRASLSQ9HDD0 168 aa9.79□□□□□ -0.84
SMARCE1-218ENST00000582955 COA4Q9NYJ1 87 aa9.79□□□□□ -0.84
SMARCE1-218ENST00000582955 RSL24D1Q9UHA3 163 aaKnown RBP9.79□□□□□ -0.84
SMARCE1-218ENST00000582955 H3BUA1 57 aa9.78□□□□□ -0.84
SMARCE1-218ENST00000582955 I3L521 148 aa9.78□□□□□ -0.84
SMARCE1-218ENST00000582955 S1PR2O95136 353 aa9.78□□□□□ -0.84
SMARCE1-218ENST00000582955 PRB2P02812 416 aaPredicted RBP9.78□□□□□ -0.84
SMARCE1-218ENST00000582955 PGAM2P15259 253 aa9.78□□□□□ -0.84
SMARCE1-218ENST00000582955 RPA2P15927 270 aa9.78□□□□□ -0.84
SMARCE1-218ENST00000582955 NQO2P16083 231 aa9.78□□□□□ -0.84
SMARCE1-218ENST00000582955 F2RP25116 425 aa9.78□□□□□ -0.84
SMARCE1-218ENST00000582955 TAS2R31P59538 309 aa9.78□□□□□ -0.84
SMARCE1-218ENST00000582955 RUNX1Q01196 453 aa9.78□□□□□ -0.84
SMARCE1-218ENST00000582955 KPRPQ5T749 579 aaPredicted RBP9.78□□□□□ -0.84
SMARCE1-218ENST00000582955 OR4A47Q6IF82 309 aa9.78□□□□□ -0.84
SMARCE1-218ENST00000582955 SLC38A6Q8IZM9 456 aa9.78□□□□□ -0.84
SMARCE1-218ENST00000582955 ARRDC1Q8N5I2 433 aa9.78□□□□□ -0.84
SMARCE1-218ENST00000582955 TMEM229BQ8NBD8 167 aa9.78□□□□□ -0.84
SMARCE1-218ENST00000582955 DMBX1Q8NFW5 382 aa9.78□□□□□ -0.84
SMARCE1-218ENST00000582955 OR1N2Q8NGR9 330 aa9.78□□□□□ -0.84
SMARCE1-218ENST00000582955 SMIM4Q8WVI0 70 aa9.78□□□□□ -0.84
SMARCE1-218ENST00000582955 FYTTD1Q96QD9 318 aaKnown RBP9.78□□□□□ -0.84
SMARCE1-218ENST00000582955 MCRIP2Q9BUT9 160 aaKnown RBP9.78□□□□□ -0.84
SMARCE1-218ENST00000582955 RSRP1Q9BUV0 290 aa9.78□□□□□ -0.84
SMARCE1-218ENST00000582955 RBM38Q9H0Z9 239 aaKnown RBP9.78□□□□□ -0.84
SMARCE1-218ENST00000582955 ALX4Q9H161 411 aaPredicted RBP9.78□□□□□ -0.84
SMARCE1-218ENST00000582955 PLEKHA2Q9HB19 425 aa9.78□□□□□ -0.84
SMARCE1-218ENST00000582955 COMMD9Q9P000 198 aa9.78□□□□□ -0.84
SMARCE1-218ENST00000582955 RABL2AQ9UBK7 228 aaPredicted RBP9.78□□□□□ -0.84
SMARCE1-218ENST00000582955 RABL2BQ9UNT1 228 aa9.78□□□□□ -0.84
SMARCE1-218ENST00000582955 C13orf42A0A1B0GVH6 325 aa9.77□□□□□ -0.85
SMARCE1-218ENST00000582955 WIPF1O43516 503 aa9.77□□□□□ -0.85
SMARCE1-218ENST00000582955 RAB3DO95716 219 aa9.77□□□□□ -0.85
SMARCE1-218ENST00000582955 LGALS1P09382 135 aaKnown RBP9.77□□□□□ -0.85
SMARCE1-218ENST00000582955 OR8U8P0C7N1 319 aa9.77□□□□□ -0.85
SMARCE1-218ENST00000582955 OR9G9P0C7N8 305 aa9.77□□□□□ -0.85
SMARCE1-218ENST00000582955 TNFSF8P32971 234 aa9.77□□□□□ -0.85
SMARCE1-218ENST00000582955 MAS1LP35410 378 aa9.77□□□□□ -0.85
SMARCE1-218ENST00000582955 LPAR6P43657 344 aa9.77□□□□□ -0.85
SMARCE1-218ENST00000582955 RPL27AP46776 148 aaKnown RBP9.77□□□□□ -0.85
SMARCE1-218ENST00000582955 PPP5CP53041 499 aa9.77□□□□□ -0.85
SMARCE1-218ENST00000582955 UCP3P55916 312 aa9.77□□□□□ -0.85
SMARCE1-218ENST00000582955 ERVK-16P61578 105 aa9.77□□□□□ -0.85
SMARCE1-218ENST00000582955 RPL8P62917 257 aaKnown RBP9.77□□□□□ -0.85
SMARCE1-218ENST00000582955 SSBP1Q04837 148 aaKnown RBP9.77□□□□□ -0.85
SMARCE1-218ENST00000582955 ZNF616Q08AN1 781 aa9.77□□□□□ -0.85
SMARCE1-218ENST00000582955 FHL3Q13643 280 aa9.77□□□□□ -0.85
SMARCE1-218ENST00000582955 SCGB2B2Q4G0G5 96 aa9.77□□□□□ -0.85
SMARCE1-218ENST00000582955 FOXB2Q5VYV0 432 aa9.77□□□□□ -0.85
SMARCE1-218ENST00000582955 STEAP1BQ6NZ63 245 aa9.77□□□□□ -0.85
SMARCE1-218ENST00000582955 TBC1D26Q86UD7 250 aa9.77□□□□□ -0.85
SMARCE1-218ENST00000582955 OR4D10Q8NGI6 311 aa9.77□□□□□ -0.85
SMARCE1-218ENST00000582955 OR4A5Q8NH83 315 aa9.77□□□□□ -0.85
SMARCE1-218ENST00000582955 DGCR14Q96DF8 476 aaKnown RBP9.77□□□□□ -0.85
SMARCE1-218ENST00000582955 GPR61Q9BZJ8 451 aa9.77□□□□□ -0.85
SMARCE1-218ENST00000582955 NXF2Q9GZY0 626 aaKnown RBP9.77□□□□□ -0.85
SMARCE1-218ENST00000582955 BET1LQ9NYM9 111 aa9.77□□□□□ -0.85
SMARCE1-218ENST00000582955 TNCP24821 2201 aa9.76□□□□□ -0.85
SMARCE1-218ENST00000582955 DPPA5A6NC42 116 aa9.76□□□□□ -0.85
SMARCE1-218ENST00000582955 FABP12A6NFH5 140 aa9.76□□□□□ -0.85
SMARCE1-218ENST00000582955 HMX3A6NHT5 357 aa9.76□□□□□ -0.85
SMARCE1-218ENST00000582955 CTDSPLO15194 276 aa9.76□□□□□ -0.85
SMARCE1-218ENST00000582955 CD74P04233 296 aa9.76□□□□□ -0.85
SMARCE1-218ENST00000582955 HLA-GP17693 338 aa9.76□□□□□ -0.85
SMARCE1-218ENST00000582955 DEFA5Q01523 94 aa9.76□□□□□ -0.85
SMARCE1-218ENST00000582955 POU2AF1Q16633 256 aa9.76□□□□□ -0.85
SMARCE1-218ENST00000582955 PDLIM3Q53GG5 364 aaPredicted RBP9.76□□□□□ -0.85
SMARCE1-218ENST00000582955 ADAD2Q8NCV1 583 aaKnown RBP9.76□□□□□ -0.85
SMARCE1-218ENST00000582955 TMEM140Q9NV12 185 aa9.76□□□□□ -0.85
SMARCE1-218ENST00000582955 IGHV4OR15-8A0A075B7B6 117 aa9.75□□□□□ -0.85
SMARCE1-218ENST00000582955 A0A087WW49 117 aa9.75□□□□□ -0.85
SMARCE1-218ENST00000582955 TRAV3A0A0B4J244 114 aa9.75□□□□□ -0.85
SMARCE1-218ENST00000582955 A0A0G2JLM5 398 aa9.75□□□□□ -0.85
SMARCE1-218ENST00000582955 MARCH11A6NNE9 402 aa9.75□□□□□ -0.85
SMARCE1-218ENST00000582955 LINC01619G3V211 115 aa9.75□□□□□ -0.85
SMARCE1-218ENST00000582955 ZNF701M0R085 212 aaPredicted RBP9.75□□□□□ -0.85
SMARCE1-218ENST00000582955 UPK2O00526 184 aa9.75□□□□□ -0.85
SMARCE1-218ENST00000582955 KRASP01116 189 aa9.75□□□□□ -0.85
SMARCE1-218ENST00000582955 MYOD1P15172 320 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms