RNA–Protein interactions for RNA: ENST00000582370.1

PDLIM1P3-201, Transcript of PDZ and LIM domain 1 pseudogene 3, humanhuman

BASIC

Gene PDLIM1P3, Length 599 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1P3-201ENST00000582370 KLRD1Q13241 179 aa6.97□□□□□ -1.29
PDLIM1P3-201ENST00000582370 VMA21Q3ZAQ7 101 aa6.97□□□□□ -1.29
PDLIM1P3-201ENST00000582370 RPL39P5Q59GN2 51 aa6.97□□□□□ -1.29
PDLIM1P3-201ENST00000582370 DEFB121Q5J5C9 76 aa6.97□□□□□ -1.29
PDLIM1P3-201ENST00000582370 THOC7Q6I9Y2 204 aaKnown RBP6.97□□□□□ -1.29
PDLIM1P3-201ENST00000582370 PIP4P2Q8N4L2 257 aa6.97□□□□□ -1.29
PDLIM1P3-201ENST00000582370 GLYATL2Q8WU03 294 aa6.97□□□□□ -1.29
PDLIM1P3-201ENST00000582370 CYYR1Q96J86 154 aa6.97□□□□□ -1.29
PDLIM1P3-201ENST00000582370 PARP12Q9H0J9 701 aaKnown RBP6.97□□□□□ -1.29
PDLIM1P3-201ENST00000582370 COA4Q9NYJ1 87 aa6.97□□□□□ -1.29
PDLIM1P3-201ENST00000582370 ZNRD1Q9P1U0 126 aa6.97□□□□□ -1.29
PDLIM1P3-201ENST00000582370 HILPDAQ9Y5L2 63 aa6.97□□□□□ -1.29
PDLIM1P3-201ENST00000582370 STAB2Q8WWQ8 2551 aa6.97□□□□□ -1.29
PDLIM1P3-201ENST00000582370 SHOXO15266 292 aa6.96□□□□□ -1.3
PDLIM1P3-201ENST00000582370 FGF16O43320 207 aa6.96□□□□□ -1.3
PDLIM1P3-201ENST00000582370 TNFSF12O43508 249 aa6.96□□□□□ -1.3
PDLIM1P3-201ENST00000582370 PROP1O75360 226 aa6.96□□□□□ -1.3
PDLIM1P3-201ENST00000582370 IGHV3-7P01780 117 aa6.96□□□□□ -1.3
PDLIM1P3-201ENST00000582370 SNRNP70P08621 437 aaKnown RBP6.96□□□□□ -1.3
PDLIM1P3-201ENST00000582370 OR5AC1P0C628 307 aa6.96□□□□□ -1.3
PDLIM1P3-201ENST00000582370 TRAPPC2P0DI81 140 aa6.96□□□□□ -1.3
PDLIM1P3-201ENST00000582370 TRAPPC2BP0DI82 140 aa6.96□□□□□ -1.3
PDLIM1P3-201ENST00000582370 PI3P19957 117 aa6.96□□□□□ -1.3
PDLIM1P3-201ENST00000582370 ANXA7P20073 488 aaKnown RBP6.96□□□□□ -1.3
PDLIM1P3-201ENST00000582370 MAS1LP35410 378 aa6.96□□□□□ -1.3
PDLIM1P3-201ENST00000582370 PPP1R1AQ13522 171 aa6.96□□□□□ -1.3
PDLIM1P3-201ENST00000582370 H2BFWTQ7Z2G1 175 aa6.96□□□□□ -1.3
PDLIM1P3-201ENST00000582370 HSD17B13Q7Z5P4 300 aaPredicted RBP6.96□□□□□ -1.3
PDLIM1P3-201ENST00000582370 C12orf45Q8N5I9 185 aaPredicted RBP6.96□□□□□ -1.3
PDLIM1P3-201ENST00000582370 C11orf44Q8N8P7 122 aa6.96□□□□□ -1.3
PDLIM1P3-201ENST00000582370 ZNF383Q8NA42 475 aa6.96□□□□□ -1.3
PDLIM1P3-201ENST00000582370 TEX45Q8NA69 505 aa6.96□□□□□ -1.3
PDLIM1P3-201ENST00000582370 ADAD2Q8NCV1 583 aaKnown RBP6.96□□□□□ -1.3
PDLIM1P3-201ENST00000582370 OR4F17Q8NGA8 305 aa6.96□□□□□ -1.3
PDLIM1P3-201ENST00000582370 RNASE11Q8TAA1 199 aaKnown RBP6.96□□□□□ -1.3
PDLIM1P3-201ENST00000582370 TMEM230Q96A57 120 aa6.96□□□□□ -1.3
PDLIM1P3-201ENST00000582370 HARBI1Q96MB7 349 aa6.96□□□□□ -1.3
PDLIM1P3-201ENST00000582370 OR4F4Q96R69 305 aa6.96□□□□□ -1.3
PDLIM1P3-201ENST00000582370 MRPL20Q9BYC9 149 aaKnown RBP6.96□□□□□ -1.3
PDLIM1P3-201ENST00000582370 BET1LQ9NYM9 111 aa6.96□□□□□ -1.3
PDLIM1P3-201ENST00000582370 HUWE1Q7Z6Z7 4374 aaKnown RBP6.96□□□□□ -1.3
PDLIM1P3-201ENST00000582370 A0A0U1RQK1 487 aa6.95□□□□□ -1.3
PDLIM1P3-201ENST00000582370 A0A1B0GU03 582 aa6.95□□□□□ -1.3
PDLIM1P3-201ENST00000582370 DBX1A6NMT0 343 aa6.95□□□□□ -1.3
PDLIM1P3-201ENST00000582370 MARCH11A6NNE9 402 aa6.95□□□□□ -1.3
PDLIM1P3-201ENST00000582370 LINC00473A8K010 186 aa6.95□□□□□ -1.3
PDLIM1P3-201ENST00000582370 FAM90A26D6RGX4 464 aa6.95□□□□□ -1.3
PDLIM1P3-201ENST00000582370 SSNA1O43805 119 aa6.95□□□□□ -1.3
PDLIM1P3-201ENST00000582370 ACTL6BO94805 426 aa6.95□□□□□ -1.3
PDLIM1P3-201ENST00000582370 OR2F2O95006 317 aa6.95□□□□□ -1.3
PDLIM1P3-201ENST00000582370 SCAF4O95104 1147 aaKnown RBP6.95□□□□□ -1.3
PDLIM1P3-201ENST00000582370 CRYZL1O95825 349 aa6.95□□□□□ -1.3
PDLIM1P3-201ENST00000582370 PET100P0DJ07 73 aa6.95□□□□□ -1.3
PDLIM1P3-201ENST00000582370 TMEM11P17152 192 aa6.95□□□□□ -1.3
PDLIM1P3-201ENST00000582370 AKR1C2P52895 323 aa6.95□□□□□ -1.3
PDLIM1P3-201ENST00000582370 UBE2KP61086 200 aa6.95□□□□□ -1.3
PDLIM1P3-201ENST00000582370 RPS16P62249 146 aaKnown RBP6.95□□□□□ -1.3
PDLIM1P3-201ENST00000582370 SUPT4H1P63272 117 aaKnown RBP6.95□□□□□ -1.3
PDLIM1P3-201ENST00000582370 TMEM187Q14656 261 aa6.95□□□□□ -1.3
PDLIM1P3-201ENST00000582370 TMEM268Q5VZI3 342 aa6.95□□□□□ -1.3
PDLIM1P3-201ENST00000582370 Q6ZNX1 250 aa6.95□□□□□ -1.3
PDLIM1P3-201ENST00000582370 C5orf24Q7Z6I8 188 aa6.95□□□□□ -1.3
PDLIM1P3-201ENST00000582370 LHFPL4Q7Z7J7 247 aa6.95□□□□□ -1.3
PDLIM1P3-201ENST00000582370 KLHDC1Q8N7A1 406 aa6.95□□□□□ -1.3
PDLIM1P3-201ENST00000582370 DMBX1Q8NFW5 382 aa6.95□□□□□ -1.3
PDLIM1P3-201ENST00000582370 NPBQ8NG41 125 aa6.95□□□□□ -1.3
PDLIM1P3-201ENST00000582370 R3HDM4Q96D70 268 aa6.95□□□□□ -1.3
PDLIM1P3-201ENST00000582370 RHOVQ96L33 236 aa6.95□□□□□ -1.3
PDLIM1P3-201ENST00000582370 TP53RKQ96S44 253 aa6.95□□□□□ -1.3
PDLIM1P3-201ENST00000582370 SSX3Q99909 188 aa6.95□□□□□ -1.3
PDLIM1P3-201ENST00000582370 SRSF8Q9BRL6 282 aaKnown RBP6.95□□□□□ -1.3
PDLIM1P3-201ENST00000582370 PDCD10Q9BUL8 212 aa6.95□□□□□ -1.3
PDLIM1P3-201ENST00000582370 MED28Q9H204 178 aa6.95□□□□□ -1.3
PDLIM1P3-201ENST00000582370 OR51J1Q9H342 316 aa6.95□□□□□ -1.3
PDLIM1P3-201ENST00000582370 PRNDQ9UKY0 176 aa6.95□□□□□ -1.3
PDLIM1P3-201ENST00000582370 FLVCR2Q9UPI3 526 aa6.95□□□□□ -1.3
PDLIM1P3-201ENST00000582370 ZNF257Q9Y2Q1 563 aa6.95□□□□□ -1.3
PDLIM1P3-201ENST00000582370 U3KQK5 164 aa6.95□□□□□ -1.3
PDLIM1P3-201ENST00000582370 STARD9Q9P2P6 4700 aa6.94□□□□□ -1.3
PDLIM1P3-201ENST00000582370 WI2-2373I1.2A0A1W2PRP0 233 aa6.94□□□□□ -1.3
PDLIM1P3-201ENST00000582370 NBR2O15453 112 aa6.94□□□□□ -1.3
PDLIM1P3-201ENST00000582370 MED6O75586 246 aa6.94□□□□□ -1.3
PDLIM1P3-201ENST00000582370 OR2A4O95047 310 aa6.94□□□□□ -1.3
PDLIM1P3-201ENST00000582370 IGKV1D-33P01593 117 aa6.94□□□□□ -1.3
PDLIM1P3-201ENST00000582370 IGKV1-33P01594 117 aa6.94□□□□□ -1.3
PDLIM1P3-201ENST00000582370 NHLRC4P0CG21 123 aaPredicted RBP6.94□□□□□ -1.3
PDLIM1P3-201ENST00000582370 CD33P20138 364 aa6.94□□□□□ -1.3
PDLIM1P3-201ENST00000582370 LPAR6P43657 344 aa6.94□□□□□ -1.3
PDLIM1P3-201ENST00000582370 REG1BP48304 166 aa6.94□□□□□ -1.3
PDLIM1P3-201ENST00000582370 ATP5IP56385 69 aaPredicted RBP6.94□□□□□ -1.3
PDLIM1P3-201ENST00000582370 RPL30P62888 115 aaKnown RBP6.94□□□□□ -1.3
PDLIM1P3-201ENST00000582370 FGL1Q08830 312 aa6.94□□□□□ -1.3
PDLIM1P3-201ENST00000582370 HES1Q14469 280 aa6.94□□□□□ -1.3
PDLIM1P3-201ENST00000582370 NSUN5P1Q3KNT7 163 aa6.94□□□□□ -1.3
PDLIM1P3-201ENST00000582370 GSG1LQ6UXU4 331 aa6.94□□□□□ -1.3
PDLIM1P3-201ENST00000582370 ZNF429Q86V71 674 aa6.94□□□□□ -1.3
PDLIM1P3-201ENST00000582370 NDUFA11Q86Y39 141 aa6.94□□□□□ -1.3
PDLIM1P3-201ENST00000582370 FOXRED2Q8IWF2 684 aa6.94□□□□□ -1.3
PDLIM1P3-201ENST00000582370 PDZD9Q8IXQ8 264 aa6.94□□□□□ -1.3
PDLIM1P3-201ENST00000582370 MMD2Q8IY49 270 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms