RNA–Protein interactions for RNA: ENST00000581707.1

SREBF1-220, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 695 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-220ENST00000581707 DEFA5Q01523 94 aa15□□□□□ -0.01
SREBF1-220ENST00000581707 ACSM6Q6P461 480 aa15□□□□□ -0.01
SREBF1-220ENST00000581707 SSX9Q7RTT3 188 aa15□□□□□ -0.01
SREBF1-220ENST00000581707 SNX29P2Q8IUI4 249 aa15□□□□□ -0.01
SREBF1-220ENST00000581707 BORCS5Q969J3 196 aa15□□□□□ -0.01
SREBF1-220ENST00000581707 SCPEP1Q9HB40 452 aa15□□□□□ -0.01
SREBF1-220ENST00000581707 COL7A1Q02388 2944 aa14.99□□□□□ -0.01
SREBF1-220ENST00000581707 ZP3P21754 424 aa14.99□□□□□ -0.01
SREBF1-220ENST00000581707 HLA-DMAP28067 261 aa14.99□□□□□ -0.01
SREBF1-220ENST00000581707 MAS1LP35410 378 aa14.99□□□□□ -0.01
SREBF1-220ENST00000581707 ZNF343Q6P1L6 599 aa14.99□□□□□ -0.01
SREBF1-220ENST00000581707 SLC25A42Q86VD7 318 aa14.99□□□□□ -0.01
SREBF1-220ENST00000581707 TTC9CQ8N5M4 171 aa14.99□□□□□ -0.01
SREBF1-220ENST00000581707 OR6F1Q8NGZ6 308 aa14.99□□□□□ -0.01
SREBF1-220ENST00000581707 OR51H1Q8NH63 302 aa14.99□□□□□ -0.01
SREBF1-220ENST00000581707 AP3S1Q92572 193 aa14.99□□□□□ -0.01
SREBF1-220ENST00000581707 MOB3AQ96BX8 217 aa14.99□□□□□ -0.01
SREBF1-220ENST00000581707 ADAM30Q9UKF2 790 aa14.99□□□□□ -0.01
SREBF1-220ENST00000581707 ZNF256Q9Y2P7 627 aaPredicted RBP14.99□□□□□ -0.01
SREBF1-220ENST00000581707 HMX3A6NHT5 357 aa14.98□□□□□ -0.01
SREBF1-220ENST00000581707 FAM25AB3EWG3 89 aa14.98□□□□□ -0.01
SREBF1-220ENST00000581707 FAM25CB3EWG5 89 aa14.98□□□□□ -0.01
SREBF1-220ENST00000581707 FAM25GB3EWG6 89 aa14.98□□□□□ -0.01
SREBF1-220ENST00000581707 RBMXL2O75526 392 aaKnown RBP14.98□□□□□ -0.01
SREBF1-220ENST00000581707 HPRT1P00492 218 aa14.98□□□□□ -0.01
SREBF1-220ENST00000581707 PRH1P02810 166 aa14.98□□□□□ -0.01
SREBF1-220ENST00000581707 ZNF182P17025 639 aaPredicted RBP14.98□□□□□ -0.01
SREBF1-220ENST00000581707 HRH1P35367 487 aa14.98□□□□□ -0.01
SREBF1-220ENST00000581707 RPL27AP46776 148 aaKnown RBP14.98□□□□□ -0.01
SREBF1-220ENST00000581707 ALDH3B2P48448 385 aa14.98□□□□□ -0.01
SREBF1-220ENST00000581707 AADACL3Q5VUY0 350 aa14.98□□□□□ -0.01
SREBF1-220ENST00000581707 GPR141Q7Z602 305 aa14.98□□□□□ -0.01
SREBF1-220ENST00000581707 CD300LFQ8TDQ1 290 aa14.98□□□□□ -0.01
SREBF1-220ENST00000581707 PEF1Q9UBV8 284 aaKnown RBP14.98□□□□□ -0.01
SREBF1-220ENST00000581707 TEX22C9J3V5 150 aa14.97□□□□□ -0.01
SREBF1-220ENST00000581707 LY86O95711 162 aa14.97□□□□□ -0.01
SREBF1-220ENST00000581707 IL6RP08887 468 aaPredicted RBP14.97□□□□□ -0.01
SREBF1-220ENST00000581707 TAS2R31P59538 309 aa14.97□□□□□ -0.01
SREBF1-220ENST00000581707 RPL8P62917 257 aaKnown RBP14.97□□□□□ -0.01
SREBF1-220ENST00000581707 RHOGP84095 191 aa14.97□□□□□ -0.01
SREBF1-220ENST00000581707 CD69Q07108 199 aa14.97□□□□□ -0.01
SREBF1-220ENST00000581707 OR4A47Q6IF82 309 aa14.97□□□□□ -0.01
SREBF1-220ENST00000581707 OR4A5Q8NH83 315 aa14.97□□□□□ -0.01
SREBF1-220ENST00000581707 FYTTD1Q96QD9 318 aaKnown RBP14.97□□□□□ -0.01
SREBF1-220ENST00000581707 OR4C12Q96R67 309 aa14.97□□□□□ -0.01
SREBF1-220ENST00000581707 B9D2Q9BPU9 175 aa14.97□□□□□ -0.01
SREBF1-220ENST00000581707 ELOVL1Q9BW60 279 aa14.97□□□□□ -0.01
SREBF1-220ENST00000581707 HRASLSQ9HDD0 168 aa14.97□□□□□ -0.01
SREBF1-220ENST00000581707 AKIP1Q9NQ31 210 aa14.97□□□□□ -0.01
SREBF1-220ENST00000581707 BET1LQ9NYM9 111 aa14.97□□□□□ -0.01
SREBF1-220ENST00000581707 TRBV9A0A0B4J1U6 114 aa14.96□□□□□ -0.01
SREBF1-220ENST00000581707 DPPA5A6NC42 116 aa14.96□□□□□ -0.01
SREBF1-220ENST00000581707 FAM223BA6NKX1 122 aa14.96□□□□□ -0.01
SREBF1-220ENST00000581707 E7EUB6 86 aa14.96□□□□□ -0.01
SREBF1-220ENST00000581707 PGLYRP1O75594 196 aaPredicted RBP14.96□□□□□ -0.01
SREBF1-220ENST00000581707 ZNF735P0CB33 412 aa14.96□□□□□ -0.01
SREBF1-220ENST00000581707 NQO2P16083 231 aa14.96□□□□□ -0.01
SREBF1-220ENST00000581707 HLA-GP17693 338 aa14.96□□□□□ -0.01
SREBF1-220ENST00000581707 RCVRNP35243 200 aa14.96□□□□□ -0.01
SREBF1-220ENST00000581707 ZNF45Q02386 682 aa14.96□□□□□ -0.01
SREBF1-220ENST00000581707 ATP5G2Q06055 141 aa14.96□□□□□ -0.01
SREBF1-220ENST00000581707 KLF5Q13887 457 aaPredicted RBP14.96□□□□□ -0.01
SREBF1-220ENST00000581707 FAM223AQ8IWN6 122 aa14.96□□□□□ -0.01
SREBF1-220ENST00000581707 PLEKHA2Q9HB19 425 aa14.96□□□□□ -0.01
SREBF1-220ENST00000581707 SLC2A9Q9NRM0 540 aa14.96□□□□□ -0.01
SREBF1-220ENST00000581707 ZNF257Q9Y2Q1 563 aa14.96□□□□□ -0.01
SREBF1-220ENST00000581707 LSM4Q9Y4Z0 139 aaKnown RBP14.96□□□□□ -0.01
SREBF1-220ENST00000581707 TRBV12-3P01733 135 aa14.95□□□□□ -0.02
SREBF1-220ENST00000581707 RLN1P04808 185 aa14.95□□□□□ -0.02
SREBF1-220ENST00000581707 TSPAN5P62079 268 aa14.95□□□□□ -0.02
SREBF1-220ENST00000581707 POU2AF1Q16633 256 aa14.95□□□□□ -0.02
SREBF1-220ENST00000581707 CMTM1Q8IZ96 169 aa14.95□□□□□ -0.02
SREBF1-220ENST00000581707 NECAP1Q8NC96 275 aa14.95□□□□□ -0.02
SREBF1-220ENST00000581707 OR6Q1Q8NGQ2 317 aa14.95□□□□□ -0.02
SREBF1-220ENST00000581707 FXYD6Q9H0Q3 95 aa14.95□□□□□ -0.02
SREBF1-220ENST00000581707 A0A1B0GW64 132 aa14.94□□□□□ -0.02
SREBF1-220ENST00000581707 NPIPB5A8MRT5 1133 aa14.94□□□□□ -0.02
SREBF1-220ENST00000581707 GPR31O00270 319 aa14.94□□□□□ -0.02
SREBF1-220ENST00000581707 S1PR2O95136 353 aa14.94□□□□□ -0.02
SREBF1-220ENST00000581707 MYOD1P15172 320 aa14.94□□□□□ -0.02
SREBF1-220ENST00000581707 DMBX1Q8NFW5 382 aa14.94□□□□□ -0.02
SREBF1-220ENST00000581707 COMMD9Q9P000 198 aa14.94□□□□□ -0.02
SREBF1-220ENST00000581707 EXTL2Q9UBQ6 330 aa14.94□□□□□ -0.02
SREBF1-220ENST00000581707 UPK2O00526 184 aa14.93□□□□□ -0.02
SREBF1-220ENST00000581707 OR2J3O76001 311 aa14.93□□□□□ -0.02
SREBF1-220ENST00000581707 AREGP15514 252 aa14.93□□□□□ -0.02
SREBF1-220ENST00000581707 SPNP16150 400 aa14.93□□□□□ -0.02
SREBF1-220ENST00000581707 F2RP25116 425 aa14.93□□□□□ -0.02
SREBF1-220ENST00000581707 SYNJ2BPP57105 145 aa14.93□□□□□ -0.02
SREBF1-220ENST00000581707 EXOSC2Q13868 293 aaKnown RBP14.93□□□□□ -0.02
SREBF1-220ENST00000581707 TATDN3Q17R31 274 aa14.93□□□□□ -0.02
SREBF1-220ENST00000581707 RPEL1Q2QD12 228 aa14.93□□□□□ -0.02
SREBF1-220ENST00000581707 LPCAT3Q6P1A2 487 aa14.93□□□□□ -0.02
SREBF1-220ENST00000581707 DGCR14Q96DF8 476 aaKnown RBP14.93□□□□□ -0.02
SREBF1-220ENST00000581707 TMEM140Q9NV12 185 aa14.93□□□□□ -0.02
SREBF1-220ENST00000581707 TRAV3A0A0B4J244 114 aa14.92□□□□□ -0.02
SREBF1-220ENST00000581707 CRYGCP07315 174 aa14.92□□□□□ -0.02
SREBF1-220ENST00000581707 PSMB6P28072 239 aa14.92□□□□□ -0.02
SREBF1-220ENST00000581707 ERVK-16P61578 105 aa14.92□□□□□ -0.02
SREBF1-220ENST00000581707 C15orf32Q32M92 178 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms