RNA–Protein interactions for RNA: ENST00000581383.1

SMCHD1-205, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 806 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-205ENST00000581383 OR5K4A6NMS3 321 aa1.82□□□□□ -2.12
SMCHD1-205ENST00000581383 GNRH2O43555 120 aa1.82□□□□□ -2.12
SMCHD1-205ENST00000581383 IGHV1-69P01742 117 aa1.82□□□□□ -2.12
SMCHD1-205ENST00000581383 TPM3P06753 285 aa1.82□□□□□ -2.12
SMCHD1-205ENST00000581383 HINT1P49773 126 aaPredicted RBP1.82□□□□□ -2.12
SMCHD1-205ENST00000581383 BTN3A2P78410 334 aa1.82□□□□□ -2.12
SMCHD1-205ENST00000581383 PCOTHQ58A44 107 aa1.82□□□□□ -2.12
SMCHD1-205ENST00000581383 CHCHD2P9Q5T1J5 151 aaPredicted RBP1.82□□□□□ -2.12
SMCHD1-205ENST00000581383 AGTRAPQ6RW13 159 aa1.82□□□□□ -2.12
SMCHD1-205ENST00000581383 NAA40Q86UY6 237 aa1.82□□□□□ -2.12
SMCHD1-205ENST00000581383 SLC35F6Q8N357 371 aa1.82□□□□□ -2.12
SMCHD1-205ENST00000581383 CNEP1R1Q8N9A8 125 aa1.82□□□□□ -2.12
SMCHD1-205ENST00000581383 RPS4Y2Q8TD47 263 aa1.82□□□□□ -2.12
SMCHD1-205ENST00000581383 TMEM109Q9BVC6 243 aa1.82□□□□□ -2.12
SMCHD1-205ENST00000581383 ZNF471Q9BX82 626 aaPredicted RBP1.82□□□□□ -2.12
SMCHD1-205ENST00000581383 HDHD2Q9H0R4 259 aa1.82□□□□□ -2.12
SMCHD1-205ENST00000581383 SHPRHQ149N8 1683 aa1.82□□□□□ -2.12
SMCHD1-205ENST00000581383 SPHKAPQ2M3C7 1700 aa1.82□□□□□ -2.12
SMCHD1-205ENST00000581383 SLX4Q8IY92 1834 aa1.82□□□□□ -2.12
SMCHD1-205ENST00000581383 HFM1A2PYH4 1435 aa1.82□□□□□ -2.12
SMCHD1-205ENST00000581383 CCDC144AA2RUR9 1427 aa1.82□□□□□ -2.12
SMCHD1-205ENST00000581383 PIK3C2GO75747 1445 aa1.82□□□□□ -2.12
SMCHD1-205ENST00000581383 TNS3Q68CZ2 1445 aa1.82□□□□□ -2.12
SMCHD1-205ENST00000581383 BCL9LQ86UU0 1499 aa1.82□□□□□ -2.12
SMCHD1-205ENST00000581383 IGHV3-15A0A0B4J1V0 119 aa1.81□□□□□ -2.12
SMCHD1-205ENST00000581383 A0A0G2JQZ4 141 aa1.81□□□□□ -2.12
SMCHD1-205ENST00000581383 TEX50A0A1B0GTY4 177 aa1.81□□□□□ -2.12
SMCHD1-205ENST00000581383 C5orf49A4QMS7 147 aa1.81□□□□□ -2.12
SMCHD1-205ENST00000581383 S1PR2O95136 353 aa1.81□□□□□ -2.12
SMCHD1-205ENST00000581383 MAP3K7CLP57077 242 aa1.81□□□□□ -2.12
SMCHD1-205ENST00000581383 TPM4P67936 248 aa1.81□□□□□ -2.12
SMCHD1-205ENST00000581383 HLA-DRB3P79483 266 aa1.81□□□□□ -2.12
SMCHD1-205ENST00000581383 JOSD1Q15040 202 aaPredicted RBP1.81□□□□□ -2.12
SMCHD1-205ENST00000581383 EBPQ15125 230 aaKnown RBP1.81□□□□□ -2.12
SMCHD1-205ENST00000581383 DAND5Q8N907 189 aa1.81□□□□□ -2.12
SMCHD1-205ENST00000581383 OR4X2Q8NGF9 303 aa1.81□□□□□ -2.12
SMCHD1-205ENST00000581383 EEF1AKMT1Q8WVE0 214 aa1.81□□□□□ -2.12
SMCHD1-205ENST00000581383 MS4A6EQ96DS6 147 aa1.81□□□□□ -2.12
SMCHD1-205ENST00000581383 CMTM5Q96DZ9 223 aa1.81□□□□□ -2.12
SMCHD1-205ENST00000581383 MRPS24Q96EL2 167 aaKnown RBP1.81□□□□□ -2.12
SMCHD1-205ENST00000581383 CPNE2Q96FN4 548 aaPredicted RBP1.81□□□□□ -2.12
SMCHD1-205ENST00000581383 PACRGQ96M98 296 aaPredicted RBP1.81□□□□□ -2.12
SMCHD1-205ENST00000581383 DRC3Q9H069 523 aa1.81□□□□□ -2.12
SMCHD1-205ENST00000581383 COL11A1P12107 1806 aaPredicted RBP1.81□□□□□ -2.12
SMCHD1-205ENST00000581383 TECPR2O15040 1411 aa1.81□□□□□ -2.12
SMCHD1-205ENST00000581383 YTHDC2Q9H6S0 1430 aaKnown RBP1.81□□□□□ -2.12
SMCHD1-205ENST00000581383 CDK12Q9NYV4 1490 aaPredicted RBP1.81□□□□□ -2.12
SMCHD1-205ENST00000581383 USP32Q8NFA0 1604 aa1.8□□□□□ -2.12
SMCHD1-205ENST00000581383 GBF1Q92538 1859 aa1.8□□□□□ -2.12
SMCHD1-205ENST00000581383 NCKAP5O14513 1909 aa1.8□□□□□ -2.12
SMCHD1-205ENST00000581383 HLA-DQB2P05538 268 aa1.8□□□□□ -2.12
SMCHD1-205ENST00000581383 COX5BP10606 129 aa1.8□□□□□ -2.12
SMCHD1-205ENST00000581383 XCL1P47992 114 aa1.8□□□□□ -2.12
SMCHD1-205ENST00000581383 CXCR4P61073 352 aa1.8□□□□□ -2.12
SMCHD1-205ENST00000581383 PPP1R1AQ13522 171 aa1.8□□□□□ -2.12
SMCHD1-205ENST00000581383 SPATA12Q7Z6I5 190 aa1.8□□□□□ -2.12
SMCHD1-205ENST00000581383 PACRGLQ8N7B6 248 aa1.8□□□□□ -2.12
SMCHD1-205ENST00000581383 ZNF283Q8N7M2 679 aa1.8□□□□□ -2.12
SMCHD1-205ENST00000581383 SLC35G5Q96KT7 338 aa1.8□□□□□ -2.12
SMCHD1-205ENST00000581383 Q9BRP9 147 aa1.8□□□□□ -2.12
SMCHD1-205ENST00000581383 ATP6V1DQ9Y5K8 247 aa1.8□□□□□ -2.12
SMCHD1-205ENST00000581383 NCOA3Q9Y6Q9 1424 aa1.8□□□□□ -2.12
SMCHD1-205ENST00000581383 ATP7BP35670 1465 aa1.8□□□□□ -2.12
SMCHD1-205ENST00000581383 NRXN1Q9ULB1 1477 aa1.8□□□□□ -2.12
SMCHD1-205ENST00000581383 ADGRB1O14514 1584 aa1.8□□□□□ -2.12
SMCHD1-205ENST00000581383 NAV1Q8NEY1 1877 aa1.8□□□□□ -2.12
SMCHD1-205ENST00000581383 TMED7-TICAM2A0A0A6YYA0 188 aa1.79□□□□□ -2.12
SMCHD1-205ENST00000581383 OR6C6A6NF89 314 aa1.79□□□□□ -2.12
SMCHD1-205ENST00000581383 C2orf74A8MZ97 194 aa1.79□□□□□ -2.12
SMCHD1-205ENST00000581383 MT-CO2P00403 227 aa1.79□□□□□ -2.12
SMCHD1-205ENST00000581383 ZNF728P0DKX0 622 aa1.79□□□□□ -2.12
SMCHD1-205ENST00000581383 PEBP1P30086 187 aaKnown RBP1.79□□□□□ -2.12
SMCHD1-205ENST00000581383 CDC34P49427 236 aaPredicted RBP1.79□□□□□ -2.12
SMCHD1-205ENST00000581383 TAS2R30P59541 319 aa1.79□□□□□ -2.12
SMCHD1-205ENST00000581383 SNAP25P60880 206 aa1.79□□□□□ -2.12
SMCHD1-205ENST00000581383 RPS24P62847 133 aaKnown RBP1.79□□□□□ -2.12
SMCHD1-205ENST00000581383 GNA12Q03113 381 aa1.79□□□□□ -2.12
SMCHD1-205ENST00000581383 MGAT3Q09327 533 aa1.79□□□□□ -2.12
SMCHD1-205ENST00000581383 SAPCD1Q5SSQ6 148 aa1.79□□□□□ -2.12
SMCHD1-205ENST00000581383 CST9Q5W186 159 aa1.79□□□□□ -2.12
SMCHD1-205ENST00000581383 DCANP1Q8TF63 244 aa1.79□□□□□ -2.12
SMCHD1-205ENST00000581383 RNASE6Q93091 150 aaKnown RBP1.79□□□□□ -2.12
SMCHD1-205ENST00000581383 C12orf43Q96C57 262 aaKnown RBP1.79□□□□□ -2.12
SMCHD1-205ENST00000581383 ANKRD36BP1Q96IX9 119 aa1.79□□□□□ -2.12
SMCHD1-205ENST00000581383 NDUFB11Q9NX14 153 aa1.79□□□□□ -2.12
SMCHD1-205ENST00000581383 BABAM2Q9NXR7 383 aa1.79□□□□□ -2.12
SMCHD1-205ENST00000581383 BLMP54132 1417 aaPredicted RBP1.79□□□□□ -2.12
SMCHD1-205ENST00000581383 TULP4Q9NRJ4 1543 aa1.79□□□□□ -2.12
SMCHD1-205ENST00000581383 NRKQ7Z2Y5 1582 aa1.79□□□□□ -2.12
SMCHD1-205ENST00000581383 PLCH1Q4KWH8 1693 aa1.79□□□□□ -2.12
SMCHD1-205ENST00000581383 ABCA3Q99758 1704 aa1.79□□□□□ -2.12
SMCHD1-205ENST00000581383 EP400Q96L91 3159 aa1.78□□□□□ -2.12
SMCHD1-205ENST00000581383 DOCK10Q96BY6 2186 aa1.78□□□□□ -2.12
SMCHD1-205ENST00000581383 SCN9AQ15858 1988 aa1.78□□□□□ -2.12
SMCHD1-205ENST00000581383 NYNRINQ9P2P1 1898 aaKnown RBP1.78□□□□□ -2.12
SMCHD1-205ENST00000581383 NRAPQ86VF7 1730 aa1.78□□□□□ -2.12
SMCHD1-205ENST00000581383 FMN2Q9NZ56 1722 aa1.78□□□□□ -2.12
SMCHD1-205ENST00000581383 ADGRB2O60241 1585 aa1.78□□□□□ -2.12
SMCHD1-205ENST00000581383 PXDNLA1KZ92 1463 aa1.78□□□□□ -2.12
SMCHD1-205ENST00000581383 A0A0A6YYH2 397 aa1.78□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms