RNA–Protein interactions for RNA: ENST00000581241.5

CSNK1D-217, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 6,094 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-217ENST00000581241 RRHO14718 337 aa12.38□□□□□ -0.43
CSNK1D-217ENST00000581241 TFF2Q03403 129 aa12.38□□□□□ -0.43
CSNK1D-217ENST00000581241 SAPCD1Q5SSQ6 148 aa12.38□□□□□ -0.43
CSNK1D-217ENST00000581241 PMS2CLQ68D20 193 aa12.38□□□□□ -0.43
CSNK1D-217ENST00000581241 PRR7Q8TB68 274 aa12.38□□□□□ -0.43
CSNK1D-217ENST00000581241 VCX2Q9H322 139 aa12.38□□□□□ -0.43
CSNK1D-217ENST00000581241 LPAR2Q9HBW0 351 aa12.38□□□□□ -0.43
CSNK1D-217ENST00000581241 IZUMO1RA6ND01 250 aa12.38□□□□□ -0.43
CSNK1D-217ENST00000581241 NPIPB13A6NJU9 1138 aa12.38□□□□□ -0.43
CSNK1D-217ENST00000581241 NPIPB4C9JG80 1138 aa12.38□□□□□ -0.43
CSNK1D-217ENST00000581241 NPFFO15130 113 aa12.38□□□□□ -0.43
CSNK1D-217ENST00000581241 APOHP02749 345 aaPredicted RBP12.38□□□□□ -0.43
CSNK1D-217ENST00000581241 ZNF56Q15929 161 aa12.38□□□□□ -0.43
CSNK1D-217ENST00000581241 IMMP2LQ96T52 175 aa12.38□□□□□ -0.43
CSNK1D-217ENST00000581241 KLF4O43474 513 aa12.38□□□□□ -0.43
CSNK1D-217ENST00000581241 KLF14Q8TD94 323 aaPredicted RBP12.38□□□□□ -0.43
CSNK1D-217ENST00000581241 GATAD1Q8WUU5 269 aa12.38□□□□□ -0.43
CSNK1D-217ENST00000581241 CTHRC1Q96CG8 243 aa12.38□□□□□ -0.43
CSNK1D-217ENST00000581241 RPRMQ9NS64 109 aa12.38□□□□□ -0.43
CSNK1D-217ENST00000581241 SHISA3A0PJX4 238 aa12.38□□□□□ -0.43
CSNK1D-217ENST00000581241 EEF1AKMT3Q96AZ1 226 aa12.38□□□□□ -0.43
CSNK1D-217ENST00000581241 LINC00470Q9BZP3 86 aa12.38□□□□□ -0.43
CSNK1D-217ENST00000581241 RNF222A6NCQ9 220 aa12.37□□□□□ -0.43
CSNK1D-217ENST00000581241 OR11H12B2RN74 326 aa12.37□□□□□ -0.43
CSNK1D-217ENST00000581241 SLC17A3O00476 420 aa12.37□□□□□ -0.43
CSNK1D-217ENST00000581241 OR11H1Q8NG94 326 aa12.37□□□□□ -0.43
CSNK1D-217ENST00000581241 OR11H2Q8NH07 326 aa12.37□□□□□ -0.43
CSNK1D-217ENST00000581241 ALKBH7Q9BT30 221 aaPredicted RBP12.37□□□□□ -0.43
CSNK1D-217ENST00000581241 C19orf67A6NJJ6 358 aa12.37□□□□□ -0.43
CSNK1D-217ENST00000581241 GPX4P36969 197 aaPredicted RBP12.37□□□□□ -0.43
CSNK1D-217ENST00000581241 IGLV3-21P80748 117 aaPredicted RBP12.37□□□□□ -0.43
CSNK1D-217ENST00000581241 RIPPLY2Q5TAB7 128 aa12.37□□□□□ -0.43
CSNK1D-217ENST00000581241 PF4V1P10720 104 aa12.37□□□□□ -0.43
CSNK1D-217ENST00000581241 C19orf48Q6RUI8 117 aa12.37□□□□□ -0.43
CSNK1D-217ENST00000581241 TCF23Q7RTU1 214 aa12.37□□□□□ -0.43
CSNK1D-217ENST00000581241 NPIPB3Q92617 1050 aa12.37□□□□□ -0.43
CSNK1D-217ENST00000581241 RAX2Q96IS3 184 aa12.37□□□□□ -0.43
CSNK1D-217ENST00000581241 RPP21Q9H633 154 aaKnown RBP12.37□□□□□ -0.43
CSNK1D-217ENST00000581241 GEMIN7Q9H840 131 aaKnown RBP12.37□□□□□ -0.43
CSNK1D-217ENST00000581241 CLDN16Q9Y5I7 305 aa12.37□□□□□ -0.43
CSNK1D-217ENST00000581241 CGAP01215 116 aa12.37□□□□□ -0.43
CSNK1D-217ENST00000581241 FGF5P12034 268 aa12.37□□□□□ -0.43
CSNK1D-217ENST00000581241 EGR4Q05215 589 aa12.37□□□□□ -0.43
CSNK1D-217ENST00000581241 PAPPA-AS1Q5QFB9 102 aa12.37□□□□□ -0.43
CSNK1D-217ENST00000581241 OR9G1Q8NH87 305 aa12.37□□□□□ -0.43
CSNK1D-217ENST00000581241 DDB2Q92466 427 aa12.37□□□□□ -0.43
CSNK1D-217ENST00000581241 C18orf12Q96KH6 178 aa12.37□□□□□ -0.43
CSNK1D-217ENST00000581241 ARID1BQ8NFD5 2236 aaPredicted RBP12.36□□□□□ -0.43
CSNK1D-217ENST00000581241 A0A1B0GW15 77 aa12.36□□□□□ -0.43
CSNK1D-217ENST00000581241 CCL21O00585 134 aa12.36□□□□□ -0.43
CSNK1D-217ENST00000581241 TSPOP30536 169 aa12.36□□□□□ -0.43
CSNK1D-217ENST00000581241 TTC9CQ8N5M4 171 aa12.36□□□□□ -0.43
CSNK1D-217ENST00000581241 LRTM2Q8N967 370 aa12.36□□□□□ -0.43
CSNK1D-217ENST00000581241 NPIPB11E5RHQ5 1161 aa12.36□□□□□ -0.43
CSNK1D-217ENST00000581241 PEX7O00628 323 aa12.36□□□□□ -0.43
CSNK1D-217ENST00000581241 ZIC3O60481 467 aa12.36□□□□□ -0.43
CSNK1D-217ENST00000581241 ATRAIDQ6UW56 229 aa12.36□□□□□ -0.43
CSNK1D-217ENST00000581241 LINC00587B1AMM8 73 aa12.36□□□□□ -0.43
CSNK1D-217ENST00000581241 MOSP00540 346 aa12.36□□□□□ -0.43
CSNK1D-217ENST00000581241 THY1P04216 161 aa12.36□□□□□ -0.43
CSNK1D-217ENST00000581241 TMEM170AQ8WVE7 144 aa12.36□□□□□ -0.43
CSNK1D-217ENST00000581241 STRCP1A6NGW2 1772 aa12.36□□□□□ -0.43
CSNK1D-217ENST00000581241 ST6GALNAC6Q969X2 333 aa12.36□□□□□ -0.43
CSNK1D-217ENST00000581241 JKAMPQ9P055 326 aa12.36□□□□□ -0.43
CSNK1D-217ENST00000581241 SPCS1Q9Y6A9 102 aa12.36□□□□□ -0.43
CSNK1D-217ENST00000581241 TRAV8-6A0A0B4J262 113 aa12.36□□□□□ -0.43
CSNK1D-217ENST00000581241 ATP5LO75964 103 aa12.35□□□□□ -0.43
CSNK1D-217ENST00000581241 TMEM171Q8WVE6 324 aa12.35□□□□□ -0.43
CSNK1D-217ENST00000581241 AICDAQ9GZX7 198 aa12.35□□□□□ -0.43
CSNK1D-217ENST00000581241 FOXI3A8MTJ6 420 aaPredicted RBP12.35□□□□□ -0.43
CSNK1D-217ENST00000581241 RAMP1O60894 148 aa12.35□□□□□ -0.43
CSNK1D-217ENST00000581241 COX6A1P12074 109 aa12.35□□□□□ -0.43
CSNK1D-217ENST00000581241 IFI27L2Q9H2X8 130 aa12.35□□□□□ -0.43
CSNK1D-217ENST00000581241 PPIAL4CA0A0B4J2A2 164 aa12.35□□□□□ -0.43
CSNK1D-217ENST00000581241 A0A1B0GWB2 263 aa12.35□□□□□ -0.43
CSNK1D-217ENST00000581241 PPIAL4GP0DN37 164 aa12.35□□□□□ -0.43
CSNK1D-217ENST00000581241 FAM106AQ4KMX7 169 aa12.35□□□□□ -0.43
CSNK1D-217ENST00000581241 PEAR1Q5VY43 1037 aaPredicted RBP12.35□□□□□ -0.43
CSNK1D-217ENST00000581241 DNAL4O96015 105 aa12.35□□□□□ -0.43
CSNK1D-217ENST00000581241 ADMP35318 185 aa12.35□□□□□ -0.43
CSNK1D-217ENST00000581241 ATP5G3P48201 142 aa12.35□□□□□ -0.43
CSNK1D-217ENST00000581241 SAMD13Q5VXD3 122 aa12.34□□□□□ -0.43
CSNK1D-217ENST00000581241 TEX45Q8NA69 505 aa12.34□□□□□ -0.43
CSNK1D-217ENST00000581241 C9orf172C9J069 976 aa12.34□□□□□ -0.43
CSNK1D-217ENST00000581241 FOXA3P55318 350 aaPredicted RBP12.34□□□□□ -0.43
CSNK1D-217ENST00000581241 ICAM4Q14773 271 aa12.34□□□□□ -0.43
CSNK1D-217ENST00000581241 RPL39P5Q59GN2 51 aa12.34□□□□□ -0.43
CSNK1D-217ENST00000581241 TDRD15B5MCY1 1934 aaKnown RBP12.34□□□□□ -0.43
CSNK1D-217ENST00000581241 PATE3B3GLJ2 98 aa12.34□□□□□ -0.43
CSNK1D-217ENST00000581241 BTCP35070 178 aa12.34□□□□□ -0.43
CSNK1D-217ENST00000581241 DUX5Q96PT3 197 aa12.34□□□□□ -0.43
CSNK1D-217ENST00000581241 CLEC7AQ9BXN2 247 aa12.34□□□□□ -0.43
CSNK1D-217ENST00000581241 IGFBP2P18065 325 aa12.34□□□□□ -0.43
CSNK1D-217ENST00000581241 ACSF3Q4G176 576 aaPredicted RBP12.34□□□□□ -0.43
CSNK1D-217ENST00000581241 PSMG4Q5JS54 123 aa12.34□□□□□ -0.43
CSNK1D-217ENST00000581241 SMRP1Q8NCR6 262 aa12.34□□□□□ -0.43
CSNK1D-217ENST00000581241 ZNF638Q14966 1978 aaKnown RBP12.34□□□□□ -0.43
CSNK1D-217ENST00000581241 IGKV3D-11A0A0A0MRZ8 115 aa12.34□□□□□ -0.43
CSNK1D-217ENST00000581241 UBE2CO00762 179 aa12.34□□□□□ -0.43
CSNK1D-217ENST00000581241 IGKV3-11P04433 115 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms