RNA–Protein interactions for RNA: ENST00000580357.1

IFT20-210, Transcript of intraflagellar transport 20, humanhuman

TSL 3

Gene IFT20, Length 752 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-210ENST00000580357 MRGPRG-AS1Q2M3A8 158 aa12.79□□□□□ -0.36
IFT20-210ENST00000580357 PDLIM3Q53GG5 364 aaPredicted RBP12.79□□□□□ -0.36
IFT20-210ENST00000580357 RNASE12Q5GAN4 147 aaKnown RBP12.79□□□□□ -0.36
IFT20-210ENST00000580357 STEAP1BQ6NZ63 245 aa12.79□□□□□ -0.36
IFT20-210ENST00000580357 IDO2Q6ZQW0 420 aa12.79□□□□□ -0.36
IFT20-210ENST00000580357 MRPL41Q8IXM3 137 aaKnown RBP12.79□□□□□ -0.36
IFT20-210ENST00000580357 CADM3Q8N126 398 aa12.79□□□□□ -0.36
IFT20-210ENST00000580357 TERB2Q8NHR7 220 aa12.79□□□□□ -0.36
IFT20-210ENST00000580357 ZFAND1Q8TCF1 268 aa12.79□□□□□ -0.36
IFT20-210ENST00000580357 DGCR14Q96DF8 476 aaKnown RBP12.79□□□□□ -0.36
IFT20-210ENST00000580357 P2RX4Q99571 388 aa12.79□□□□□ -0.36
IFT20-210ENST00000580357 RBM38Q9H0Z9 239 aaKnown RBP12.79□□□□□ -0.36
IFT20-210ENST00000580357 ZNF430Q9H8G1 570 aaPredicted RBP12.79□□□□□ -0.36
IFT20-210ENST00000580357 ZNF355PQ9NSJ1 428 aa12.79□□□□□ -0.36
IFT20-210ENST00000580357 BET1LQ9NYM9 111 aa12.79□□□□□ -0.36
IFT20-210ENST00000580357 COMMD9Q9P000 198 aa12.79□□□□□ -0.36
IFT20-210ENST00000580357 TGP01266 2768 aa12.78□□□□□ -0.36
IFT20-210ENST00000580357 I3L521 148 aa12.78□□□□□ -0.36
IFT20-210ENST00000580357 M0QYG6 137 aa12.78□□□□□ -0.36
IFT20-210ENST00000580357 PLXNB1O43157 2135 aa12.78□□□□□ -0.36
IFT20-210ENST00000580357 SOX15O60248 233 aa12.78□□□□□ -0.36
IFT20-210ENST00000580357 RAMP3O60896 148 aa12.78□□□□□ -0.36
IFT20-210ENST00000580357 ECI1P42126 302 aa12.78□□□□□ -0.36
IFT20-210ENST00000580357 ERVK-16P61578 105 aa12.78□□□□□ -0.36
IFT20-210ENST00000580357 SSBP2P81877 361 aaPredicted RBP12.78□□□□□ -0.36
IFT20-210ENST00000580357 DGCR2P98153 550 aa12.78□□□□□ -0.36
IFT20-210ENST00000580357 SAMD5Q5TGI4 173 aa12.78□□□□□ -0.36
IFT20-210ENST00000580357 C18orf65Q6ZTR6 163 aa12.78□□□□□ -0.36
IFT20-210ENST00000580357 LINC00482Q8N8I6 264 aa12.78□□□□□ -0.36
IFT20-210ENST00000580357 OR5T1Q8NG75 326 aa12.78□□□□□ -0.36
IFT20-210ENST00000580357 SRSF12Q8WXF0 261 aaKnown RBP12.78□□□□□ -0.36
IFT20-210ENST00000580357 RAX2Q96IS3 184 aa12.78□□□□□ -0.36
IFT20-210ENST00000580357 GPHA2Q96T91 129 aa12.78□□□□□ -0.36
IFT20-210ENST00000580357 SOSTQ9BQB4 213 aa12.78□□□□□ -0.36
IFT20-210ENST00000580357 MPPED1O15442 326 aa12.77□□□□□ -0.37
IFT20-210ENST00000580357 RLN1P04808 185 aa12.77□□□□□ -0.37
IFT20-210ENST00000580357 PGAM2P15259 253 aa12.77□□□□□ -0.37
IFT20-210ENST00000580357 PTBP1P26599 531 aaKnown RBP eCLIP12.77□□□□□ -0.37
IFT20-210ENST00000580357 RPL8P62917 257 aaKnown RBP12.77□□□□□ -0.37
IFT20-210ENST00000580357 DEFA6Q01524 100 aa12.77□□□□□ -0.37
IFT20-210ENST00000580357 ETV3LQ6ZN32 361 aa12.77□□□□□ -0.37
IFT20-210ENST00000580357 VKORC1L1Q8N0U8 176 aa12.77□□□□□ -0.37
IFT20-210ENST00000580357 DMBX1Q8NFW5 382 aa12.77□□□□□ -0.37
IFT20-210ENST00000580357 TINAGL1Q9GZM7 467 aaPredicted RBP12.77□□□□□ -0.37
IFT20-210ENST00000580357 FXYD6Q9H0Q3 95 aa12.77□□□□□ -0.37
IFT20-210ENST00000580357 HRASLSQ9HDD0 168 aa12.77□□□□□ -0.37
IFT20-210ENST00000580357 ZMAT5Q9UDW3 170 aaKnown RBP12.77□□□□□ -0.37
IFT20-210ENST00000580357 VWFP04275 2813 aa12.77□□□□□ -0.37
IFT20-210ENST00000580357 DISC1C4P0D8 188 aa12.76□□□□□ -0.37
IFT20-210ENST00000580357 G3V4G9 280 aa12.76□□□□□ -0.37
IFT20-210ENST00000580357 TRGV3P03979 118 aa12.76□□□□□ -0.37
IFT20-210ENST00000580357 OR8U8P0C7N1 319 aa12.76□□□□□ -0.37
IFT20-210ENST00000580357 OR9G9P0C7N8 305 aa12.76□□□□□ -0.37
IFT20-210ENST00000580357 AKAIN1P0CW23 69 aa12.76□□□□□ -0.37
IFT20-210ENST00000580357 LPAR6P43657 344 aa12.76□□□□□ -0.37
IFT20-210ENST00000580357 RPL27AP46776 148 aaKnown RBP12.76□□□□□ -0.37
IFT20-210ENST00000580357 TPPP2P59282 170 aa12.76□□□□□ -0.37
IFT20-210ENST00000580357 RND3P61587 244 aa12.76□□□□□ -0.37
IFT20-210ENST00000580357 KPRPQ5T749 579 aaPredicted RBP12.76□□□□□ -0.37
IFT20-210ENST00000580357 SSX9Q7RTT3 188 aa12.76□□□□□ -0.37
IFT20-210ENST00000580357 LHFPL1Q86WI0 220 aa12.76□□□□□ -0.37
IFT20-210ENST00000580357 TTC9CQ8N5M4 171 aa12.76□□□□□ -0.37
IFT20-210ENST00000580357 OR11H1Q8NG94 326 aa12.76□□□□□ -0.37
IFT20-210ENST00000580357 OR1N2Q8NGR9 330 aa12.76□□□□□ -0.37
IFT20-210ENST00000580357 DPF1Q92782 380 aa12.76□□□□□ -0.37
IFT20-210ENST00000580357 USMG5Q96IX5 58 aa12.76□□□□□ -0.37
IFT20-210ENST00000580357 MS4A10Q96PG2 267 aa12.76□□□□□ -0.37
IFT20-210ENST00000580357 C13orf42A0A1B0GVH6 325 aa12.75□□□□□ -0.37
IFT20-210ENST00000580357 IL6RP08887 468 aaPredicted RBP12.75□□□□□ -0.37
IFT20-210ENST00000580357 HLA-GP17693 338 aa12.75□□□□□ -0.37
IFT20-210ENST00000580357 ZNF616Q08AN1 781 aa12.75□□□□□ -0.37
IFT20-210ENST00000580357 PHLDA2Q53GA4 152 aa12.75□□□□□ -0.37
IFT20-210ENST00000580357 OXLD1Q5BKU9 147 aa12.75□□□□□ -0.37
IFT20-210ENST00000580357 OR4A47Q6IF82 309 aa12.75□□□□□ -0.37
IFT20-210ENST00000580357 TBC1D26Q86UD7 250 aa12.75□□□□□ -0.37
IFT20-210ENST00000580357 COA4Q9NYJ1 87 aa12.75□□□□□ -0.37
IFT20-210ENST00000580357 UPK2O00526 184 aa12.74□□□□□ -0.37
IFT20-210ENST00000580357 B3GALNT1O75752 331 aa12.74□□□□□ -0.37
IFT20-210ENST00000580357 HSPB1P04792 205 aaKnown RBP12.74□□□□□ -0.37
IFT20-210ENST00000580357 LGALS1P09382 135 aaKnown RBP12.74□□□□□ -0.37
IFT20-210ENST00000580357 IGLL1P15814 213 aa12.74□□□□□ -0.37
IFT20-210ENST00000580357 RPA2P15927 270 aa12.74□□□□□ -0.37
IFT20-210ENST00000580357 FHL3Q13643 280 aa12.74□□□□□ -0.37
IFT20-210ENST00000580357 SURF2Q15527 256 aaPredicted RBP12.74□□□□□ -0.37
IFT20-210ENST00000580357 BEAN1Q3B7T3 259 aa12.74□□□□□ -0.37
IFT20-210ENST00000580357 SCGB2B2Q4G0G5 96 aa12.74□□□□□ -0.37
IFT20-210ENST00000580357 ASPHD1Q5U4P2 390 aa12.74□□□□□ -0.37
IFT20-210ENST00000580357 REC114Q7Z4M0 266 aa12.74□□□□□ -0.37
IFT20-210ENST00000580357 CCDC71LQ8N9Z2 235 aa12.74□□□□□ -0.37
IFT20-210ENST00000580357 SRSF8Q9BRL6 282 aaKnown RBP12.74□□□□□ -0.37
IFT20-210ENST00000580357 THAP7Q9BT49 309 aaPredicted RBP12.74□□□□□ -0.37
IFT20-210ENST00000580357 COMMD5Q9GZQ3 224 aa12.74□□□□□ -0.37
IFT20-210ENST00000580357 GNB4Q9HAV0 340 aa12.74□□□□□ -0.37
IFT20-210ENST00000580357 SLC2A9Q9NRM0 540 aa12.74□□□□□ -0.37
IFT20-210ENST00000580357 FKBP11Q9NYL4 201 aa12.74□□□□□ -0.37
IFT20-210ENST00000580357 ANKRD20A5PA0PJZ0 165 aa12.73□□□□□ -0.37
IFT20-210ENST00000580357 DPPA5A6NC42 116 aa12.73□□□□□ -0.37
IFT20-210ENST00000580357 MARCH11A6NNE9 402 aa12.73□□□□□ -0.37
IFT20-210ENST00000580357 SNAPC5O75971 98 aa12.73□□□□□ -0.37
IFT20-210ENST00000580357 ATG12O94817 140 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms