RNA–Protein interactions for RNA: ENST00000580315.1

CDC42EP4-205, Transcript of CDC42 effector protein 4, humanhuman

TSL 2

Gene CDC42EP4, Length 1,022 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-205ENST00000580315 RHOVQ96L33 236 aa19.24■□□□□ 0.67
CDC42EP4-205ENST00000580315 SPIN2AQ99865 258 aa19.24■□□□□ 0.67
CDC42EP4-205ENST00000580315 SPIN2BQ9BPZ2 258 aa19.24■□□□□ 0.67
CDC42EP4-205ENST00000580315 A0A0G2JLM5 398 aa19.23■□□□□ 0.67
CDC42EP4-205ENST00000580315 C13orf42A0A1B0GVH6 325 aa19.23■□□□□ 0.67
CDC42EP4-205ENST00000580315 KBTBD11O94819 623 aa19.23■□□□□ 0.67
CDC42EP4-205ENST00000580315 IGHV3-11P01762 117 aa19.23■□□□□ 0.67
CDC42EP4-205ENST00000580315 ASPHD1Q5U4P2 390 aa19.23■□□□□ 0.67
CDC42EP4-205ENST00000580315 OR51H1Q8NH63 302 aa19.23■□□□□ 0.67
CDC42EP4-205ENST00000580315 TMEM167AQ8TBQ9 72 aa19.23■□□□□ 0.67
CDC42EP4-205ENST00000580315 COA4Q9NYJ1 87 aa19.23■□□□□ 0.67
CDC42EP4-205ENST00000580315 LINC01619G3V211 115 aa19.22■□□□□ 0.67
CDC42EP4-205ENST00000580315 RAMP3O60896 148 aa19.22■□□□□ 0.67
CDC42EP4-205ENST00000580315 BRI3O95415 125 aa19.22■□□□□ 0.67
CDC42EP4-205ENST00000580315 HPRT1P00492 218 aa19.22■□□□□ 0.67
CDC42EP4-205ENST00000580315 C9orf66Q5T8R8 295 aa19.22■□□□□ 0.67
CDC42EP4-205ENST00000580315 PUSL1Q8N0Z8 303 aaKnown RBP19.22■□□□□ 0.67
CDC42EP4-205ENST00000580315 ALX4Q9H161 411 aaPredicted RBP19.22■□□□□ 0.67
CDC42EP4-205ENST00000580315 APELAP0DMC3 54 aa19.21■□□□□ 0.67
CDC42EP4-205ENST00000580315 MAS1LP35410 378 aa19.21■□□□□ 0.67
CDC42EP4-205ENST00000580315 TAS2R31P59538 309 aa19.21■□□□□ 0.67
CDC42EP4-205ENST00000580315 RNASE12Q5GAN4 147 aaKnown RBP19.21■□□□□ 0.67
CDC42EP4-205ENST00000580315 LPCAT3Q6P1A2 487 aa19.21■□□□□ 0.67
CDC42EP4-205ENST00000580315 SSX9Q7RTT3 188 aa19.21■□□□□ 0.67
CDC42EP4-205ENST00000580315 TINAGL1Q9GZM7 467 aaPredicted RBP19.21■□□□□ 0.67
CDC42EP4-205ENST00000580315 FXYD6Q9H0Q3 95 aa19.21■□□□□ 0.67
CDC42EP4-205ENST00000580315 CCDC59Q9P031 241 aaKnown RBP19.21■□□□□ 0.67
CDC42EP4-205ENST00000580315 SEC14L6B5MCN3 397 aa19.2■□□□□ 0.66
CDC42EP4-205ENST00000580315 GPR31O00270 319 aa19.2■□□□□ 0.66
CDC42EP4-205ENST00000580315 OR9G9P0C7N8 305 aa19.2■□□□□ 0.66
CDC42EP4-205ENST00000580315 NQO2P16083 231 aa19.2■□□□□ 0.66
CDC42EP4-205ENST00000580315 S100GP29377 79 aa19.2■□□□□ 0.66
CDC42EP4-205ENST00000580315 OR4A5Q8NH83 315 aa19.2■□□□□ 0.66
CDC42EP4-205ENST00000580315 SCOCQ9UIL1 159 aa19.2■□□□□ 0.66
CDC42EP4-205ENST00000580315 PGLYRP1O75594 196 aaPredicted RBP19.19■□□□□ 0.66
CDC42EP4-205ENST00000580315 HSPB1P04792 205 aaKnown RBP19.19■□□□□ 0.66
CDC42EP4-205ENST00000580315 RLN1P04808 185 aa19.19■□□□□ 0.66
CDC42EP4-205ENST00000580315 SLC25A42Q86VD7 318 aa19.19■□□□□ 0.66
CDC42EP4-205ENST00000580315 LAX1Q8IWV1 398 aa19.19■□□□□ 0.66
CDC42EP4-205ENST00000580315 OR52I2Q8NH67 350 aa19.19■□□□□ 0.66
CDC42EP4-205ENST00000580315 DYNC2LI1Q8TCX1 351 aa19.19■□□□□ 0.66
CDC42EP4-205ENST00000580315 FCAMRQ8WWV6 532 aa19.19■□□□□ 0.66
CDC42EP4-205ENST00000580315 MIXL1Q9H2W2 232 aa19.19■□□□□ 0.66
CDC42EP4-205ENST00000580315 PLEKHA2Q9HB19 425 aa19.19■□□□□ 0.66
CDC42EP4-205ENST00000580315 HRASLSQ9HDD0 168 aa19.19■□□□□ 0.66
CDC42EP4-205ENST00000580315 BET1LQ9NYM9 111 aa19.19■□□□□ 0.66
CDC42EP4-205ENST00000580315 IGHV4OR15-8A0A075B7B6 117 aa19.18■□□□□ 0.66
CDC42EP4-205ENST00000580315 A0A087WW49 117 aa19.18■□□□□ 0.66
CDC42EP4-205ENST00000580315 CTDSP2O14595 271 aa19.18■□□□□ 0.66
CDC42EP4-205ENST00000580315 IFNA6P05013 189 aa19.18■□□□□ 0.66
CDC42EP4-205ENST00000580315 RPL27AP46776 148 aaKnown RBP19.18■□□□□ 0.66
CDC42EP4-205ENST00000580315 RPL8P62917 257 aaKnown RBP19.18■□□□□ 0.66
CDC42EP4-205ENST00000580315 DCTN2Q13561 401 aaKnown RBP19.18■□□□□ 0.66
CDC42EP4-205ENST00000580315 C10orf55Q5SWW7 151 aa19.18■□□□□ 0.66
CDC42EP4-205ENST00000580315 OR4A47Q6IF82 309 aa19.18■□□□□ 0.66
CDC42EP4-205ENST00000580315 ADAD2Q8NCV1 583 aaKnown RBP19.18■□□□□ 0.66
CDC42EP4-205ENST00000580315 USMG5Q96IX5 58 aa19.18■□□□□ 0.66
CDC42EP4-205ENST00000580315 ABHD1Q96SE0 405 aa19.18■□□□□ 0.66
CDC42EP4-205ENST00000580315 COMMD9Q9P000 198 aa19.18■□□□□ 0.66
CDC42EP4-205ENST00000580315 KLK11Q9UBX7 282 aa19.18■□□□□ 0.66
CDC42EP4-205ENST00000580315 MTFP1Q9UDX5 166 aa19.18■□□□□ 0.66
CDC42EP4-205ENST00000580315 OVOL1O14753 267 aa19.17■□□□□ 0.66
CDC42EP4-205ENST00000580315 TBPP20226 339 aa19.17■□□□□ 0.66
CDC42EP4-205ENST00000580315 F2RP25116 425 aa19.17■□□□□ 0.66
CDC42EP4-205ENST00000580315 MRPS10P82664 201 aaKnown RBP19.17■□□□□ 0.66
CDC42EP4-205ENST00000580315 RNASE10Q5GAN6 216 aaKnown RBP19.17■□□□□ 0.66
CDC42EP4-205ENST00000580315 DCUN1D4Q92564 292 aa19.17■□□□□ 0.66
CDC42EP4-205ENST00000580315 ISOC1Q96CN7 298 aa19.17■□□□□ 0.66
CDC42EP4-205ENST00000580315 DPPA5A6NC42 116 aa19.16■□□□□ 0.66
CDC42EP4-205ENST00000580315 H3BMQ9 156 aa19.16■□□□□ 0.66
CDC42EP4-205ENST00000580315 M0QYG6 137 aa19.16■□□□□ 0.66
CDC42EP4-205ENST00000580315 HLA-GP17693 338 aa19.16■□□□□ 0.66
CDC42EP4-205ENST00000580315 INSL3P51460 131 aa19.16■□□□□ 0.66
CDC42EP4-205ENST00000580315 SLURP1P55000 103 aa19.16■□□□□ 0.66
CDC42EP4-205ENST00000580315 ERVK-16P61578 105 aa19.16■□□□□ 0.66
CDC42EP4-205ENST00000580315 DGCR2P98153 550 aa19.16■□□□□ 0.66
CDC42EP4-205ENST00000580315 POU2AF1Q16633 256 aa19.16■□□□□ 0.66
CDC42EP4-205ENST00000580315 TTC9CQ8N5M4 171 aa19.16■□□□□ 0.66
CDC42EP4-205ENST00000580315 DMBX1Q8NFW5 382 aa19.16■□□□□ 0.66
CDC42EP4-205ENST00000580315 DGCR14Q96DF8 476 aaKnown RBP19.16■□□□□ 0.66
CDC42EP4-205ENST00000580315 FYTTD1Q96QD9 318 aaKnown RBP19.16■□□□□ 0.66
CDC42EP4-205ENST00000580315 RANGRFQ9HD47 186 aaPredicted RBP19.16■□□□□ 0.66
CDC42EP4-205ENST00000580315 RABL2AQ9UBK7 228 aaPredicted RBP19.16■□□□□ 0.66
CDC42EP4-205ENST00000580315 RABL2BQ9UNT1 228 aa19.16■□□□□ 0.66
CDC42EP4-205ENST00000580315 S1PR2O95136 353 aa19.15■□□□□ 0.66
CDC42EP4-205ENST00000580315 UCP3P55916 312 aa19.15■□□□□ 0.66
CDC42EP4-205ENST00000580315 SLC38A6Q8IZM9 456 aa19.15■□□□□ 0.66
CDC42EP4-205ENST00000580315 DLX4Q92988 240 aaPredicted RBP19.15■□□□□ 0.66
CDC42EP4-205ENST00000580315 DIRAS2Q96HU8 199 aa19.15■□□□□ 0.66
CDC42EP4-205ENST00000580315 RSRP1Q9BUV0 290 aa19.15■□□□□ 0.66
CDC42EP4-205ENST00000580315 FAM223BA6NKX1 122 aa19.14■□□□□ 0.65
CDC42EP4-205ENST00000580315 GABARAPH6UMI1 98 aa19.14■□□□□ 0.65
CDC42EP4-205ENST00000580315 ZNF735P0CB33 412 aa19.14■□□□□ 0.65
CDC42EP4-205ENST00000580315 PHLDA2Q53GA4 152 aa19.14■□□□□ 0.65
CDC42EP4-205ENST00000580315 FAM223AQ8IWN6 122 aa19.14■□□□□ 0.65
CDC42EP4-205ENST00000580315 ARRDC1Q8N5I2 433 aa19.14■□□□□ 0.65
CDC42EP4-205ENST00000580315 C6orf62Q9GZU0 229 aaPredicted RBP19.14■□□□□ 0.65
CDC42EP4-205ENST00000580315 TMEM140Q9NV12 185 aa19.14■□□□□ 0.65
CDC42EP4-205ENST00000580315 ZNF257Q9Y2Q1 563 aa19.14■□□□□ 0.65
CDC42EP4-205ENST00000580315 HMX3A6NHT5 357 aa19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms