RNA–Protein interactions for RNA: ENST00000580095.5

TOP3A-209, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 1 (best)

Gene TOP3A, Length 2,929 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-209ENST00000580095 AQP7O14520 342 aa8.7□□□□□ -1.02
TOP3A-209ENST00000580095 PAGE4O60829 102 aa8.7□□□□□ -1.02
TOP3A-209ENST00000580095 CLDN14O95500 239 aa8.7□□□□□ -1.02
TOP3A-209ENST00000580095 MRGPRGQ86SM5 289 aa8.7□□□□□ -1.02
TOP3A-209ENST00000580095 ABHD12Q8N2K0 398 aa8.7□□□□□ -1.02
TOP3A-209ENST00000580095 GCSAMQ8N6F7 178 aa8.7□□□□□ -1.02
TOP3A-209ENST00000580095 FRZBQ92765 325 aa8.7□□□□□ -1.02
TOP3A-209ENST00000580095 ELOVL1Q9BW60 279 aa8.7□□□□□ -1.02
TOP3A-209ENST00000580095 NPCDR1Q9BY65 106 aa8.7□□□□□ -1.02
TOP3A-209ENST00000580095 SDF2L1Q9HCN8 221 aa8.7□□□□□ -1.02
TOP3A-209ENST00000580095 KITLGP21583 273 aa8.7□□□□□ -1.02
TOP3A-209ENST00000580095 TDGF1P3P51864 188 aa8.7□□□□□ -1.02
TOP3A-209ENST00000580095 MEF2BQ02080 365 aaPredicted RBP8.7□□□□□ -1.02
TOP3A-209ENST00000580095 PRAMEF5Q5TYX0 476 aa8.7□□□□□ -1.02
TOP3A-209ENST00000580095 ZNF474Q6S9Z5 364 aaPredicted RBP8.7□□□□□ -1.02
TOP3A-209ENST00000580095 ZCCHC24Q8N2G6 241 aaKnown RBP8.7□□□□□ -1.02
TOP3A-209ENST00000580095 ABHD5Q8WTS1 349 aa8.7□□□□□ -1.02
TOP3A-209ENST00000580095 TMEM147Q9BVK8 224 aa8.7□□□□□ -1.02
TOP3A-209ENST00000580095 PLSCR4Q9NRQ2 329 aa8.7□□□□□ -1.02
TOP3A-209ENST00000580095 A0A087WWC5 75 aa8.69□□□□□ -1.02
TOP3A-209ENST00000580095 RRHO14718 337 aa8.69□□□□□ -1.02
TOP3A-209ENST00000580095 OPN1MWP04001 364 aa8.69□□□□□ -1.02
TOP3A-209ENST00000580095 SOD3P08294 240 aa8.69□□□□□ -1.02
TOP3A-209ENST00000580095 WNT2P09544 360 aa8.69□□□□□ -1.02
TOP3A-209ENST00000580095 OPN1MW2P0DN77 364 aa8.69□□□□□ -1.02
TOP3A-209ENST00000580095 OPN1MW3P0DN78 364 aa8.69□□□□□ -1.02
TOP3A-209ENST00000580095 PIP4P1Q86T03 277 aa8.69□□□□□ -1.02
TOP3A-209ENST00000580095 ITLN1Q8WWA0 313 aa8.69□□□□□ -1.02
TOP3A-209ENST00000580095 CLUHP3Q96NS8 147 aa8.69□□□□□ -1.02
TOP3A-209ENST00000580095 GAL3ST2Q9H3Q3 398 aa8.69□□□□□ -1.02
TOP3A-209ENST00000580095 C15orf62A8K5M9 175 aa8.69□□□□□ -1.02
TOP3A-209ENST00000580095 CGAP01215 116 aa8.69□□□□□ -1.02
TOP3A-209ENST00000580095 IGLV1-44P01699 117 aa8.69□□□□□ -1.02
TOP3A-209ENST00000580095 TRGC1P0CF51 173 aa8.69□□□□□ -1.02
TOP3A-209ENST00000580095 DUTP33316 252 aaKnown RBP8.69□□□□□ -1.02
TOP3A-209ENST00000580095 ZNF709Q8N972 641 aa8.69□□□□□ -1.02
TOP3A-209ENST00000580095 SLC24A4Q8NFF2 622 aa8.69□□□□□ -1.02
TOP3A-209ENST00000580095 SNX22Q96L94 193 aa8.69□□□□□ -1.02
TOP3A-209ENST00000580095 HINT2Q9BX68 163 aa8.69□□□□□ -1.02
TOP3A-209ENST00000580095 SLC25A15Q9Y619 301 aa8.69□□□□□ -1.02
TOP3A-209ENST00000580095 LRBAP50851 2863 aa8.68□□□□□ -1.02
TOP3A-209ENST00000580095 TLN1Q9Y490 2541 aaKnown RBP8.68□□□□□ -1.02
TOP3A-209ENST00000580095 PGPEP1LA6NFU8 196 aa8.68□□□□□ -1.02
TOP3A-209ENST00000580095 FAM90A26D6RGX4 464 aa8.68□□□□□ -1.02
TOP3A-209ENST00000580095 CLDN34H7C241 214 aa8.68□□□□□ -1.02
TOP3A-209ENST00000580095 MAS1LP35410 378 aa8.68□□□□□ -1.02
TOP3A-209ENST00000580095 CDKN1BP46527 198 aa8.68□□□□□ -1.02
TOP3A-209ENST00000580095 MORN2Q502X0 79 aa8.68□□□□□ -1.02
TOP3A-209ENST00000580095 PINX1Q96BK5 328 aaKnown RBP8.68□□□□□ -1.02
TOP3A-209ENST00000580095 HEYLQ9NQ87 328 aaPredicted RBP8.68□□□□□ -1.02
TOP3A-209ENST00000580095 FAM27E3Q08E93 113 aa8.68□□□□□ -1.02
TOP3A-209ENST00000580095 C16orf82Q7Z2V1 217 aa8.68□□□□□ -1.02
TOP3A-209ENST00000580095 PRR7Q8TB68 274 aa8.68□□□□□ -1.02
TOP3A-209ENST00000580095 SSMEM1Q8WWF3 244 aa8.68□□□□□ -1.02
TOP3A-209ENST00000580095 DERL1Q9BUN8 251 aa8.68□□□□□ -1.02
TOP3A-209ENST00000580095 PARLQ9H300 379 aa8.68□□□□□ -1.02
TOP3A-209ENST00000580095 PIGBOS1A0A0B4J2F0 54 aa8.67□□□□□ -1.02
TOP3A-209ENST00000580095 RAB29O14966 203 aa8.67□□□□□ -1.02
TOP3A-209ENST00000580095 CYB5R3P00387 301 aaPredicted RBP8.67□□□□□ -1.02
TOP3A-209ENST00000580095 PSMB3P49720 205 aa8.67□□□□□ -1.02
TOP3A-209ENST00000580095 CST9LP1Q5W188 147 aa8.67□□□□□ -1.02
TOP3A-209ENST00000580095 C1QL4Q86Z23 238 aa8.67□□□□□ -1.02
TOP3A-209ENST00000580095 C1orf87Q8N0U7 546 aa8.67□□□□□ -1.02
TOP3A-209ENST00000580095 ZBTB34Q8NCN2 500 aa8.67□□□□□ -1.02
TOP3A-209ENST00000580095 HSD17B10Q99714 261 aaKnown RBP8.67□□□□□ -1.02
TOP3A-209ENST00000580095 OR6C3Q9NZP0 311 aa8.67□□□□□ -1.02
TOP3A-209ENST00000580095 HCFC1P51610 2035 aa8.67□□□□□ -1.02
TOP3A-209ENST00000580095 SRRM5B3KS81 715 aa8.67□□□□□ -1.02
TOP3A-209ENST00000580095 NPPCP23582 126 aa8.67□□□□□ -1.02
TOP3A-209ENST00000580095 PRSS8Q16651 343 aa8.67□□□□□ -1.02
TOP3A-209ENST00000580095 TMEM241Q24JQ0 296 aa8.67□□□□□ -1.02
TOP3A-209ENST00000580095 ARSJQ5FYB0 599 aaPredicted RBP8.67□□□□□ -1.02
TOP3A-209ENST00000580095 MBNL2Q5VZF2 373 aaKnown RBP8.67□□□□□ -1.02
TOP3A-209ENST00000580095 ZNF664Q8N3J9 261 aa8.67□□□□□ -1.02
TOP3A-209ENST00000580095 OR4A16Q8NH70 328 aa8.67□□□□□ -1.02
TOP3A-209ENST00000580095 HIPK2Q9H2X6 1198 aa8.67□□□□□ -1.02
TOP3A-209ENST00000580095 FAM215AQ9Y5M1 114 aa8.67□□□□□ -1.02
TOP3A-209ENST00000580095 CSMD1Q96PZ7 3565 aa8.67□□□□□ -1.02
TOP3A-209ENST00000580095 CTXND1A0A1B0GTU2 59 aa8.67□□□□□ -1.02
TOP3A-209ENST00000580095 IFNL4K9M1U5 179 aa8.67□□□□□ -1.02
TOP3A-209ENST00000580095 IFNA1P01562 189 aa8.67□□□□□ -1.02
TOP3A-209ENST00000580095 FABP4P15090 132 aa8.67□□□□□ -1.02
TOP3A-209ENST00000580095 ATP5G3P48201 142 aa8.67□□□□□ -1.02
TOP3A-209ENST00000580095 LOXL3P58215 753 aa8.67□□□□□ -1.02
TOP3A-209ENST00000580095 NKX6-1P78426 367 aaPredicted RBP8.67□□□□□ -1.02
TOP3A-209ENST00000580095 IGFL2Q6UWQ7 119 aa8.67□□□□□ -1.02
TOP3A-209ENST00000580095 LAMP3Q9UQV4 416 aa8.67□□□□□ -1.02
TOP3A-209ENST00000580095 DSCAMO60469 2012 aa8.66□□□□□ -1.02
TOP3A-209ENST00000580095 YLPM1P49750 1951 aaKnown RBP8.66□□□□□ -1.02
TOP3A-209ENST00000580095 MMP23AO75900 390 aa8.66□□□□□ -1.02
TOP3A-209ENST00000580095 GZMHP20718 246 aa8.66□□□□□ -1.02
TOP3A-209ENST00000580095 CD1BP29016 333 aa8.66□□□□□ -1.02
TOP3A-209ENST00000580095 CHRNA7P36544 502 aa8.66□□□□□ -1.02
TOP3A-209ENST00000580095 RPL23P62829 140 aaKnown RBP8.66□□□□□ -1.02
TOP3A-209ENST00000580095 BSXQ3C1V8 233 aa8.66□□□□□ -1.02
TOP3A-209ENST00000580095 MIC13Q5XKP0 118 aa8.66□□□□□ -1.02
TOP3A-209ENST00000580095 FAM216BQ8N7L0 139 aa8.66□□□□□ -1.02
TOP3A-209ENST00000580095 Q8N7P7 452 aa8.66□□□□□ -1.02
TOP3A-209ENST00000580095 C1orf162Q8NEQ5 155 aaPredicted RBP8.66□□□□□ -1.02
TOP3A-209ENST00000580095 NOL4LQ96MY1 436 aaPredicted RBP8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms